RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 MSH6P52701 1360 aa24.77■■□□□ 1.56
SLC6A6-209ENST00000622176 TOM1O60784 492 aa24.76■■□□□ 1.55
SLC6A6-209ENST00000622176 SCAF1Q9H7N4 1312 aaKnown RBP24.76■■□□□ 1.55
SLC6A6-209ENST00000622176 EIF3AQ14152 1382 aaKnown RBP24.75■■□□□ 1.55
SLC6A6-209ENST00000622176 SAFB2Q14151 953 aaKnown RBP eCLIP24.74■■□□□ 1.55
SLC6A6-209ENST00000622176 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.73■■□□□ 1.55
SLC6A6-209ENST00000622176 DCCP43146 1447 aa24.73■■□□□ 1.55
SLC6A6-209ENST00000622176 DISP3Q9P2K9 1392 aa24.73■■□□□ 1.55
SLC6A6-209ENST00000622176 CENPJQ9HC77 1338 aaPredicted RBP24.73■■□□□ 1.55
SLC6A6-209ENST00000622176 PIP4K2BP78356 416 aa24.72■■□□□ 1.55
SLC6A6-209ENST00000622176 NALCNQ8IZF0 1738 aa24.72■■□□□ 1.55
SLC6A6-209ENST00000622176 ATF3P18847 181 aa24.7■■□□□ 1.54
SLC6A6-209ENST00000622176 CADPS2Q86UW7 1296 aa24.7■■□□□ 1.54
SLC6A6-209ENST00000622176 USP47Q96K76 1375 aa24.69■■□□□ 1.54
SLC6A6-209ENST00000622176 ZEB1P37275 1124 aaPredicted RBP24.69■■□□□ 1.54
SLC6A6-209ENST00000622176 MINK1Q8N4C8 1332 aaPredicted RBP24.68■■□□□ 1.54
SLC6A6-209ENST00000622176 ADGRB2O60241 1585 aa24.67■■□□□ 1.54
SLC6A6-209ENST00000622176 CDC42BPGQ6DT37 1551 aa24.67■■□□□ 1.54
SLC6A6-209ENST00000622176 HIRIP3Q9BW71 556 aaPredicted RBP24.65■■□□□ 1.54
SLC6A6-209ENST00000622176 SBNO2Q9Y2G9 1366 aa24.65■■□□□ 1.54
SLC6A6-209ENST00000622176 ST20-MTHFSA0A0A6YYL1 179 aa24.64■■□□□ 1.54
SLC6A6-209ENST00000622176 QRICH2Q9H0J4 1663 aa24.63■■□□□ 1.53
SLC6A6-209ENST00000622176 HSPA1LP34931 641 aa24.63■■□□□ 1.53
SLC6A6-209ENST00000622176 SLAIN2Q9P270 581 aa24.63■■□□□ 1.53
SLC6A6-209ENST00000622176 WASLO00401 505 aaPredicted RBP24.62■■□□□ 1.53
SLC6A6-209ENST00000622176 MST1RQ04912 1400 aa24.61■■□□□ 1.53
SLC6A6-209ENST00000622176 EIF4G2P78344 907 aaKnown RBP eCLIP24.6■■□□□ 1.531e-7■■■■■ 37.3
SLC6A6-209ENST00000622176 TESK2Q96S53 571 aa24.6■■□□□ 1.53
SLC6A6-209ENST00000622176 CDK19Q9BWU1 502 aa24.58■■□□□ 1.53
SLC6A6-209ENST00000622176 C1orf167Q5SNV9 1468 aa24.58■■□□□ 1.52
SLC6A6-209ENST00000622176 SLC24A1O60721 1099 aa24.57■■□□□ 1.52
SLC6A6-209ENST00000622176 FMN2Q9NZ56 1722 aa24.57■■□□□ 1.52
SLC6A6-209ENST00000622176 HSPA5P11021 654 aaKnown RBP24.56■■□□□ 1.52
SLC6A6-209ENST00000622176 EVC2Q86UK5 1308 aa24.56■■□□□ 1.52
SLC6A6-209ENST00000622176 MED1Q15648 1581 aaPredicted RBP24.55■■□□□ 1.52
SLC6A6-209ENST00000622176 ANKARQ7Z5J8 1434 aa24.55■■□□□ 1.52
SLC6A6-209ENST00000622176 TULP4Q9NRJ4 1543 aa24.55■■□□□ 1.52
SLC6A6-209ENST00000622176 NUTM2FA1L443 756 aa24.53■■□□□ 1.52
SLC6A6-209ENST00000622176 PRR36Q9H6K5 1346 aa24.52■■□□□ 1.52
SLC6A6-209ENST00000622176 ILDR2Q71H61 639 aa24.51■■□□□ 1.51
SLC6A6-209ENST00000622176 BRINP3Q76B58 766 aa24.51■■□□□ 1.51
SLC6A6-209ENST00000622176 SRPK2P78362 688 aaKnown RBP24.5■■□□□ 1.51
SLC6A6-209ENST00000622176 NUDT16Q96DE0 195 aaKnown RBP24.5■■□□□ 1.51
SLC6A6-209ENST00000622176 CABP2Q9NPB3 220 aa24.5■■□□□ 1.51
SLC6A6-209ENST00000622176 ROBO1Q9Y6N7 1651 aa24.5■■□□□ 1.51
SLC6A6-209ENST00000622176 ORAI2Q96SN7 254 aa24.49■■□□□ 1.51
SLC6A6-209ENST00000622176 USP32Q8NFA0 1604 aa24.49■■□□□ 1.51
SLC6A6-209ENST00000622176 ATP7BP35670 1465 aa24.48■■□□□ 1.51
SLC6A6-209ENST00000622176 TMF1P82094 1093 aa24.48■■□□□ 1.51
SLC6A6-209ENST00000622176 ESCO1Q5FWF5 840 aa24.48■■□□□ 1.51
SLC6A6-209ENST00000622176 PUS7Q96PZ0 661 aaKnown RBP24.48■■□□□ 1.51
SLC6A6-209ENST00000622176 CCDC61Q9Y6R9 512 aa24.47■■□□□ 1.51
SLC6A6-209ENST00000622176 PHF8Q9UPP1 1060 aa24.44■■□□□ 1.5
SLC6A6-209ENST00000622176 ATAD2Q6PL18 1390 aa24.43■■□□□ 1.5
SLC6A6-209ENST00000622176 RGPD8O14715 1765 aaPredicted RBP24.43■■□□□ 1.5
SLC6A6-209ENST00000622176 CDCA8Q53HL2 280 aa24.42■■□□□ 1.5
SLC6A6-209ENST00000622176 PLEKHG3A1L390 1219 aa24.41■■□□□ 1.5
SLC6A6-209ENST00000622176 TOPAZ1Q8N9V7 1692 aa24.4■■□□□ 1.5
SLC6A6-209ENST00000622176 KIF1AQ12756 1690 aa24.39■■□□□ 1.49
SLC6A6-209ENST00000622176 ITSN1Q15811 1721 aa24.38■■□□□ 1.49
SLC6A6-209ENST00000622176 PPIP5K1Q6PFW1 1433 aa24.38■■□□□ 1.49
SLC6A6-209ENST00000622176 FOXO3O43524 673 aa24.38■■□□□ 1.49
SLC6A6-209ENST00000622176 PMFBP1Q8TBY8 1022 aa24.38■■□□□ 1.49
SLC6A6-209ENST00000622176 CABP1Q9NZU7 370 aa24.38■■□□□ 1.49
SLC6A6-209ENST00000622176 AHDC1Q5TGY3 1603 aaPredicted RBP24.38■■□□□ 1.49
SLC6A6-209ENST00000622176 PHLPP1O60346 1717 aa24.38■■□□□ 1.49
SLC6A6-209ENST00000622176 NPHP3Q7Z494 1330 aa24.36■■□□□ 1.49
SLC6A6-209ENST00000622176 DDX17Q92841 729 aaKnown RBP24.36■■□□□ 1.49
SLC6A6-209ENST00000622176 NHSL1Q5SYE7 1610 aa24.35■■□□□ 1.49
SLC6A6-209ENST00000622176 POLR3AO14802 1390 aaPredicted RBP24.35■■□□□ 1.49
SLC6A6-209ENST00000622176 C11orf95C9JLR9 678 aaPredicted RBP24.35■■□□□ 1.49
SLC6A6-209ENST00000622176 NGDNQ8NEJ9 315 aaKnown RBP24.34■■□□□ 1.49
SLC6A6-209ENST00000622176 ACEP12821 1306 aa24.34■■□□□ 1.49
SLC6A6-209ENST00000622176 SOS2Q07890 1332 aaPredicted RBP24.34■■□□□ 1.49
SLC6A6-209ENST00000622176 NINLQ9Y2I6 1382 aa24.33■■□□□ 1.49
SLC6A6-209ENST00000622176 SOCS7O14512 581 aa24.33■■□□□ 1.49
SLC6A6-209ENST00000622176 PSME1Q06323 249 aa24.31■■□□□ 1.48
SLC6A6-209ENST00000622176 TMC1Q8TDI8 760 aa24.31■■□□□ 1.48
SLC6A6-209ENST00000622176 SLC12A5Q9H2X9 1139 aa24.31■■□□□ 1.48
SLC6A6-209ENST00000622176 PXDNQ92626 1479 aa24.31■■□□□ 1.48
SLC6A6-209ENST00000622176 KRT28Q7Z3Y7 464 aa24.3■■□□□ 1.48
SLC6A6-209ENST00000622176 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
SLC6A6-209ENST00000622176 XPCQ01831 940 aaPredicted RBP24.28■■□□□ 1.48
SLC6A6-209ENST00000622176 KIF7Q2M1P5 1343 aa24.28■■□□□ 1.48
SLC6A6-209ENST00000622176 COL16A1Q07092 1604 aaPredicted RBP24.28■■□□□ 1.48
SLC6A6-209ENST00000622176 CPSF1Q10570 1443 aaKnown RBP24.27■■□□□ 1.48
SLC6A6-209ENST00000622176 ZNF692Q9BU19 519 aaPredicted RBP24.27■■□□□ 1.48
SLC6A6-209ENST00000622176 LRRC59Q96AG4 307 aaKnown RBP24.26■■□□□ 1.47
SLC6A6-209ENST00000622176 SBNO1A3KN83 1393 aa24.26■■□□□ 1.47
SLC6A6-209ENST00000622176 CD163L1Q9NR16 1453 aa24.26■■□□□ 1.47
SLC6A6-209ENST00000622176 POLR3GLQ9BT43 218 aa24.25■■□□□ 1.47
SLC6A6-209ENST00000622176 TERF2IPQ9NYB0 399 aa24.25■■□□□ 1.47
SLC6A6-209ENST00000622176 BRD4O60885 1362 aaPredicted RBP24.24■■□□□ 1.47
SLC6A6-209ENST00000622176 CCDC7Q96M83 1385 aa24.24■■□□□ 1.47
SLC6A6-209ENST00000622176 HDGFL2Q7Z4V5 671 aaPredicted RBP24.23■■□□□ 1.47
SLC6A6-209ENST00000622176 WASHC2AQ641Q2 1341 aa24.23■■□□□ 1.47
SLC6A6-209ENST00000622176 USP6P35125 1406 aa24.23■■□□□ 1.47
SLC6A6-209ENST00000622176 ANKRD36BQ8N2N9 1353 aa24.22■■□□□ 1.47
SLC6A6-209ENST00000622176 SPATA31A3Q5VYP0 1347 aa24.22■■□□□ 1.47
SLC6A6-209ENST00000622176 SSH2Q76I76 1423 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms