RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 WWC1Q8IX03 1113 aa11.99□□□□□ -0.49
CLTCL1-211ENST00000621271 CPLX1O14810 134 aa11.99□□□□□ -0.49
CLTCL1-211ENST00000621271 PRDM11Q9NQV5 511 aa11.99□□□□□ -0.49
CLTCL1-211ENST00000621271 SMG6Q86US8 1419 aaKnown RBP11.99□□□□□ -0.49
CLTCL1-211ENST00000621271 HSP90AB4PQ58FF6 505 aa11.99□□□□□ -0.49
CLTCL1-211ENST00000621271 ZBED9Q6R2W3 1325 aa11.99□□□□□ -0.49
CLTCL1-211ENST00000621271 NEUROD6Q96NK8 337 aa11.98□□□□□ -0.49
CLTCL1-211ENST00000621271 APAF1O14727 1248 aa11.98□□□□□ -0.49
CLTCL1-211ENST00000621271 ROCK1Q13464 1354 aa11.98□□□□□ -0.49
CLTCL1-211ENST00000621271 GOLGA6L3A6NEY3 463 aa11.98□□□□□ -0.49
CLTCL1-211ENST00000621271 ANO8Q9HCE9 1232 aaPredicted RBP11.98□□□□□ -0.49
CLTCL1-211ENST00000621271 PLIN1O60240 522 aa11.97□□□□□ -0.49
CLTCL1-211ENST00000621271 NFXL1Q6ZNB6 911 aa11.97□□□□□ -0.49
CLTCL1-211ENST00000621271 DDX54Q8TDD1 881 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-211ENST00000621271 TPM3P06753 285 aa11.97□□□□□ -0.49
CLTCL1-211ENST00000621271 TPM2P07951 284 aa11.97□□□□□ -0.49
CLTCL1-211ENST00000621271 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
CLTCL1-211ENST00000621271 GAS2L2Q8NHY3 880 aa11.97□□□□□ -0.49
CLTCL1-211ENST00000621271 ANKRD50Q9ULJ7 1429 aa11.96□□□□□ -0.49
CLTCL1-211ENST00000621271 FYB1O15117 783 aa11.96□□□□□ -0.49
CLTCL1-211ENST00000621271 CCDC47Q96A33 483 aaKnown RBP11.96□□□□□ -0.49
CLTCL1-211ENST00000621271 IKQ13123 557 aaPredicted RBP11.96□□□□□ -0.49
CLTCL1-211ENST00000621271 GZF1Q9H116 711 aaPredicted RBP11.96□□□□□ -0.49
CLTCL1-211ENST00000621271 RAPGEF3O95398 923 aa11.96□□□□□ -0.5
CLTCL1-211ENST00000621271 PDE4AP27815 886 aa11.96□□□□□ -0.5
CLTCL1-211ENST00000621271 MCTP1Q6DN14 999 aa11.96□□□□□ -0.5
CLTCL1-211ENST00000621271 RNF20Q5VTR2 975 aa11.96□□□□□ -0.5
CLTCL1-211ENST00000621271 RSPH6AQ9H0K4 717 aa11.96□□□□□ -0.5
CLTCL1-211ENST00000621271 SLC52A1Q9NWF4 448 aa11.96□□□□□ -0.5
CLTCL1-211ENST00000621271 A0A0U1RQG5 324 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-211ENST00000621271 GSE1Q14687 1217 aa11.95□□□□□ -0.5
CLTCL1-211ENST00000621271 SLC26A8Q96RN1 970 aa11.95□□□□□ -0.5
CLTCL1-211ENST00000621271 TSR1Q2NL82 804 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-211ENST00000621271 PRKRIP1Q9H875 184 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-211ENST00000621271 DDX19BQ9UMR2 479 aa11.95□□□□□ -0.5
CLTCL1-211ENST00000621271 RUNDC1Q96C34 613 aa11.95□□□□□ -0.5
CLTCL1-211ENST00000621271 PRAM1Q96QH2 718 aa11.95□□□□□ -0.5
CLTCL1-211ENST00000621271 WASHC4Q2M389 1173 aa11.94□□□□□ -0.5
CLTCL1-211ENST00000621271 FOXD4L1Q9NU39 408 aa11.94□□□□□ -0.5
CLTCL1-211ENST00000621271 R3HCC1Q9Y3T6 440 aaKnown RBP11.94□□□□□ -0.5
CLTCL1-211ENST00000621271 CABP4P57796 275 aa11.94□□□□□ -0.5
CLTCL1-211ENST00000621271 ATP6V1DQ9Y5K8 247 aa11.94□□□□□ -0.5
CLTCL1-211ENST00000621271 ERC2O15083 957 aa11.94□□□□□ -0.5
CLTCL1-211ENST00000621271 SCAPERQ9BY12 1400 aa11.93□□□□□ -0.5
CLTCL1-211ENST00000621271 RRBP1Q9P2E9 1410 aaKnown RBP11.93□□□□□ -0.5
CLTCL1-211ENST00000621271 SPG7Q9UQ90 795 aa11.93□□□□□ -0.5
CLTCL1-211ENST00000621271 FYCO1Q9BQS8 1478 aa11.93□□□□□ -0.5
CLTCL1-211ENST00000621271 RALYLQ86SE5 291 aaKnown RBP11.92□□□□□ -0.5
CLTCL1-211ENST00000621271 ANO2Q9NQ90 1003 aa11.92□□□□□ -0.5
CLTCL1-211ENST00000621271 TBC1D2BQ9UPU7 963 aa11.92□□□□□ -0.5
CLTCL1-211ENST00000621271 WDR97A6NE52 1622 aa11.92□□□□□ -0.5
CLTCL1-211ENST00000621271 CFAP70Q5T0N1 1121 aa11.92□□□□□ -0.5
CLTCL1-211ENST00000621271 REC8O95072 547 aa11.92□□□□□ -0.5
CLTCL1-211ENST00000621271 UBTFL1P0CB47 393 aaPredicted RBP11.92□□□□□ -0.5
CLTCL1-211ENST00000621271 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
CLTCL1-211ENST00000621271 PHF14O94880 888 aa11.91□□□□□ -0.5
CLTCL1-211ENST00000621271 FOXD4L5Q5VV16 416 aaPredicted RBP11.91□□□□□ -0.5
CLTCL1-211ENST00000621271 FOXD4L4Q8WXT5 416 aaPredicted RBP11.91□□□□□ -0.5
CLTCL1-211ENST00000621271 COG6Q9Y2V7 657 aa11.91□□□□□ -0.5
CLTCL1-211ENST00000621271 DZIP1LQ8IYY4 767 aaKnown RBP11.91□□□□□ -0.5
CLTCL1-211ENST00000621271 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
CLTCL1-211ENST00000621271 GNL3LQ9NVN8 582 aaKnown RBP11.9□□□□□ -0.5
CLTCL1-211ENST00000621271 TPM1P09493 284 aa11.9□□□□□ -0.5
CLTCL1-211ENST00000621271 RRP1P56182 461 aaKnown RBP11.9□□□□□ -0.5
CLTCL1-211ENST00000621271 CCDC30Q5VVM6 783 aa11.9□□□□□ -0.5
CLTCL1-211ENST00000621271 CUL7Q14999 1698 aa11.9□□□□□ -0.5
CLTCL1-211ENST00000621271 RUSC2Q8N2Y8 1516 aa11.9□□□□□ -0.5
CLTCL1-211ENST00000621271 SAFBQ15424 915 aaKnown RBP eCLIP11.9□□□□□ -0.51
CLTCL1-211ENST00000621271 CENPQQ7L2Z9 268 aaPredicted RBP11.9□□□□□ -0.51
CLTCL1-211ENST00000621271 PLEKHH2Q8IVE3 1493 aa11.89□□□□□ -0.51
CLTCL1-211ENST00000621271 FAM161AQ3B820 660 aa11.89□□□□□ -0.51
CLTCL1-211ENST00000621271 MTMR7Q9Y216 660 aa11.89□□□□□ -0.51
CLTCL1-211ENST00000621271 FGD6Q6ZV73 1430 aa11.89□□□□□ -0.51
CLTCL1-211ENST00000621271 EIF4G3O43432 1585 aaKnown RBP11.89□□□□□ -0.51
CLTCL1-211ENST00000621271 KIF21BO75037 1637 aa11.89□□□□□ -0.51
CLTCL1-211ENST00000621271 CNNM1Q9NRU3 951 aa11.89□□□□□ -0.51
CLTCL1-211ENST00000621271 SLC4A3P48751 1232 aa11.89□□□□□ -0.51
CLTCL1-211ENST00000621271 THOC2Q8NI27 1593 aaKnown RBP11.89□□□□□ -0.51
CLTCL1-211ENST00000621271 SLC3A2P08195 630 aaKnown RBP11.88□□□□□ -0.51
CLTCL1-211ENST00000621271 ZNF530Q6P9A1 599 aaPredicted RBP11.88□□□□□ -0.51
CLTCL1-211ENST00000621271 EXOC6Q8TAG9 804 aa11.88□□□□□ -0.51
CLTCL1-211ENST00000621271 ANKRD20A12PQ8NF67 263 aa11.87□□□□□ -0.51
CLTCL1-211ENST00000621271 PCMTD1Q96MG8 357 aaPredicted RBP11.87□□□□□ -0.51
CLTCL1-211ENST00000621271 CDK19Q9BWU1 502 aa11.87□□□□□ -0.51
CLTCL1-211ENST00000621271 PLB1Q6P1J6 1458 aa11.87□□□□□ -0.51
CLTCL1-211ENST00000621271 XPCQ01831 940 aaPredicted RBP11.87□□□□□ -0.51
CLTCL1-211ENST00000621271 HSP90AA2PQ14568 343 aaPredicted RBP11.87□□□□□ -0.51
CLTCL1-211ENST00000621271 BECN2A8MW95 431 aa11.86□□□□□ -0.51
CLTCL1-211ENST00000621271 RBM5P52756 815 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLTCL1-211ENST00000621271 SART3Q15020 963 aaKnown RBP11.86□□□□□ -0.51
CLTCL1-211ENST00000621271 WWC2Q6AWC2 1192 aa11.86□□□□□ -0.51
CLTCL1-211ENST00000621271 BRMS1Q9HCU9 246 aa11.86□□□□□ -0.51
CLTCL1-211ENST00000621271 HOOK1Q9UJC3 728 aaKnown RBP11.86□□□□□ -0.51
CLTCL1-211ENST00000621271 MTHFSP49914 203 aa11.86□□□□□ -0.51
CLTCL1-211ENST00000621271 PNISRQ8TF01 805 aaKnown RBP11.86□□□□□ -0.51
CLTCL1-211ENST00000621271 IQGAP2Q13576 1575 aa11.86□□□□□ -0.51
CLTCL1-211ENST00000621271 GOLGA6L19H0YKK7 550 aa11.85□□□□□ -0.51
CLTCL1-211ENST00000621271 XBP1P17861 261 aa11.85□□□□□ -0.51
CLTCL1-211ENST00000621271 NGLY1Q96IV0 654 aa11.85□□□□□ -0.51
CLTCL1-211ENST00000621271 GNAI3P08754 354 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms