RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 YTHDC2Q9H6S0 1430 aaKnown RBP30.05■■■□□ 2.4
SMC6-210ENST00000621152 ESCO1Q5FWF5 840 aa30.05■■■□□ 2.4
SMC6-210ENST00000621152 SIRT1Q96EB6 747 aa30.05■■■□□ 2.4
SMC6-210ENST00000621152 TECPR2O15040 1411 aa30.05■■■□□ 2.4
SMC6-210ENST00000621152 DHX57Q6P158 1386 aaKnown RBP30.03■■■□□ 2.4
SMC6-210ENST00000621152 PLEKHH1Q9ULM0 1364 aa30.03■■■□□ 2.4
SMC6-210ENST00000621152 NUTM2FA1L443 756 aa30.03■■■□□ 2.4
SMC6-210ENST00000621152 DCAF11Q8TEB1 546 aa30.03■■■□□ 2.4
SMC6-210ENST00000621152 LRP6O75581 1613 aa30.03■■■□□ 2.4
SMC6-210ENST00000621152 NHSL1Q5SYE7 1610 aa30■■■□□ 2.39
SMC6-210ENST00000621152 MYOM2P54296 1465 aa30■■■□□ 2.39
SMC6-210ENST00000621152 NRXN1Q9ULB1 1477 aa30■■■□□ 2.39
SMC6-210ENST00000621152 SHPRHQ149N8 1683 aa30■■■□□ 2.39
SMC6-210ENST00000621152 SOS2Q07890 1332 aaPredicted RBP29.98■■■□□ 2.39
SMC6-210ENST00000621152 ZNF772Q68DY9 489 aaPredicted RBP29.97■■■□□ 2.39
SMC6-210ENST00000621152 PNPLA6Q8IY17 1366 aa29.95■■■□□ 2.39
SMC6-210ENST00000621152 FOXO3O43524 673 aa29.95■■■□□ 2.39
SMC6-210ENST00000621152 STAC3Q96MF2 364 aa29.95■■■□□ 2.39
SMC6-210ENST00000621152 SAFB2Q14151 953 aaKnown RBP eCLIP29.94■■■□□ 2.38
SMC6-210ENST00000621152 PRAM1Q96QH2 718 aa29.94■■■□□ 2.38
SMC6-210ENST00000621152 POGKQ9P215 609 aa29.93■■■□□ 2.38
SMC6-210ENST00000621152 CDC42BPGQ6DT37 1551 aa29.92■■■□□ 2.38
SMC6-210ENST00000621152 NPHP3Q7Z494 1330 aa29.92■■■□□ 2.38
SMC6-210ENST00000621152 XPCQ01831 940 aaPredicted RBP29.9■■■□□ 2.38
SMC6-210ENST00000621152 TRAK1Q9UPV9 953 aa29.9■■■□□ 2.38
SMC6-210ENST00000621152 KNDC1Q76NI1 1749 aa29.9■■■□□ 2.38
SMC6-210ENST00000621152 C8orf37Q96NL8 207 aa29.89■■■□□ 2.38
SMC6-210ENST00000621152 ADAMTS2O95450 1211 aa29.88■■■□□ 2.37
SMC6-210ENST00000621152 AFF2P51816 1311 aa29.87■■■□□ 2.37
SMC6-210ENST00000621152 LAMC1P11047 1609 aa29.86■■■□□ 2.37
SMC6-210ENST00000621152 NGLY1Q96IV0 654 aa29.84■■■□□ 2.37
SMC6-210ENST00000621152 RXRBP28702 533 aa29.83■■■□□ 2.37
SMC6-210ENST00000621152 PHF8Q9UPP1 1060 aa29.81■■■□□ 2.36
SMC6-210ENST00000621152 KRT28Q7Z3Y7 464 aa29.8■■■□□ 2.36
SMC6-210ENST00000621152 HIRIP3Q9BW71 556 aaPredicted RBP29.79■■■□□ 2.36
SMC6-210ENST00000621152 QTRT2Q9H974 415 aaKnown RBP29.79■■■□□ 2.36
SMC6-210ENST00000621152 ADGRB1O14514 1584 aa29.78■■■□□ 2.36
SMC6-210ENST00000621152 DLC1Q96QB1 1528 aa29.78■■■□□ 2.36
SMC6-210ENST00000621152 PXDNQ92626 1479 aa29.77■■■□□ 2.36
SMC6-210ENST00000621152 FMN2Q9NZ56 1722 aa29.76■■■□□ 2.36
SMC6-210ENST00000621152 MINK1Q8N4C8 1332 aaPredicted RBP29.76■■■□□ 2.36
SMC6-210ENST00000621152 PSME1Q06323 249 aa29.73■■■□□ 2.35
SMC6-210ENST00000621152 SPATA31A3Q5VYP0 1347 aa29.72■■■□□ 2.35
SMC6-210ENST00000621152 PMFBP1Q8TBY8 1022 aa29.72■■■□□ 2.35
SMC6-210ENST00000621152 USP21Q9UK80 565 aa29.71■■■□□ 2.35
SMC6-210ENST00000621152 WASLO00401 505 aaPredicted RBP29.69■■■□□ 2.34
SMC6-210ENST00000621152 RBM6P78332 1123 aaKnown RBP29.69■■■□□ 2.34
SMC6-210ENST00000621152 FNBP4Q8N3X1 1017 aaPredicted RBP29.68■■■□□ 2.34
SMC6-210ENST00000621152 SIN3AQ96ST3 1273 aa29.67■■■□□ 2.34
SMC6-210ENST00000621152 NBPF1Q3BBV0 1214 aa29.66■■■□□ 2.34
SMC6-210ENST00000621152 RGPD8O14715 1765 aaPredicted RBP29.66■■■□□ 2.34
SMC6-210ENST00000621152 COL22A1Q8NFW1 1626 aaPredicted RBP29.65■■■□□ 2.34
SMC6-210ENST00000621152 LMOD2Q6P5Q4 547 aa29.65■■■□□ 2.34
SMC6-210ENST00000621152 KIF1AQ12756 1690 aa29.65■■■□□ 2.34
SMC6-210ENST00000621152 ANKARQ7Z5J8 1434 aa29.64■■■□□ 2.34
SMC6-210ENST00000621152 PLEKHG5O94827 1062 aa29.63■■■□□ 2.33
SMC6-210ENST00000621152 NEUROD1Q13562 356 aa29.63■■■□□ 2.33
SMC6-210ENST00000621152 L3MBTL2Q969R5 705 aa29.63■■■□□ 2.33
SMC6-210ENST00000621152 TRPC5Q9UL62 973 aaPredicted RBP29.63■■■□□ 2.33
SMC6-210ENST00000621152 PRR36Q9H6K5 1346 aa29.63■■■□□ 2.33
SMC6-210ENST00000621152 EIF3AQ14152 1382 aaKnown RBP29.61■■■□□ 2.33
SMC6-210ENST00000621152 HAP1P54257 671 aaPredicted RBP29.6■■■□□ 2.33
SMC6-210ENST00000621152 CABLES1Q8TDN4 633 aa29.6■■■□□ 2.33
SMC6-210ENST00000621152 SBNO1A3KN83 1393 aa29.59■■■□□ 2.33
SMC6-210ENST00000621152 CDK12Q9NYV4 1490 aaPredicted RBP29.59■■■□□ 2.33
SMC6-210ENST00000621152 ADGRB2O60241 1585 aa29.59■■■□□ 2.33
SMC6-210ENST00000621152 NGDNQ8NEJ9 315 aaKnown RBP29.58■■■□□ 2.33
SMC6-210ENST00000621152 CDK19Q9BWU1 502 aa29.58■■■□□ 2.33
SMC6-210ENST00000621152 TNS3Q68CZ2 1445 aa29.57■■■□□ 2.32
SMC6-210ENST00000621152 UPF1Q92900 1129 aaKnown RBP eCLIP29.57■■■□□ 2.32
SMC6-210ENST00000621152 NUDT16Q96DE0 195 aaKnown RBP29.57■■■□□ 2.32
SMC6-210ENST00000621152 USP32Q8NFA0 1604 aa29.56■■■□□ 2.32
SMC6-210ENST00000621152 GPRASP1Q5JY77 1395 aa29.55■■■□□ 2.32
SMC6-210ENST00000621152 TULP4Q9NRJ4 1543 aa29.52■■■□□ 2.32
SMC6-210ENST00000621152 BCL9LQ86UU0 1499 aa29.52■■■□□ 2.32
SMC6-210ENST00000621152 ARHGEF10O15013 1369 aa29.52■■■□□ 2.32
SMC6-210ENST00000621152 UNC5CLQ8IV45 518 aa29.5■■■□□ 2.31
SMC6-210ENST00000621152 RGS12O14924 1447 aa29.5■■■□□ 2.31
SMC6-210ENST00000621152 ATRNO75882 1429 aa29.5■■■□□ 2.31
SMC6-210ENST00000621152 ARHGEF28Q8N1W1 1705 aaKnown RBP29.5■■■□□ 2.31
SMC6-210ENST00000621152 KIAA1210Q9ULL0 1709 aa29.5■■■□□ 2.31
SMC6-210ENST00000621152 PAK3O75914 559 aaPredicted RBP29.49■■■□□ 2.31
SMC6-210ENST00000621152 GJD4Q96KN9 370 aaPredicted RBP29.48■■■□□ 2.31
SMC6-210ENST00000621152 CCDC61Q9Y6R9 512 aa29.47■■■□□ 2.31
SMC6-210ENST00000621152 CENPJQ9HC77 1338 aaPredicted RBP29.45■■■□□ 2.31
SMC6-210ENST00000621152 TRIM26Q12899 539 aaPredicted RBP29.44■■■□□ 2.3
SMC6-210ENST00000621152 MARF1Q9Y4F3 1742 aaKnown RBP29.44■■■□□ 2.3
SMC6-210ENST00000621152 FAM83GA6ND36 823 aa29.43■■■□□ 2.3
SMC6-210ENST00000621152 SLIT2O94813 1529 aa29.42■■■□□ 2.3
SMC6-210ENST00000621152 SRPK2P78362 688 aaKnown RBP29.42■■■□□ 2.3
SMC6-210ENST00000621152 NBPF8Q3BBV2 869 aa29.41■■■□□ 2.3
SMC6-210ENST00000621152 ATP7BP35670 1465 aa29.41■■■□□ 2.3
SMC6-210ENST00000621152 ACEP12821 1306 aa29.41■■■□□ 2.3
SMC6-210ENST00000621152 PLEKHG3A1L390 1219 aa29.4■■■□□ 2.3
SMC6-210ENST00000621152 CABP2Q9NPB3 220 aa29.39■■■□□ 2.3
SMC6-210ENST00000621152 TRPM3Q9HCF6 1732 aaPredicted RBP29.37■■■□□ 2.29
SMC6-210ENST00000621152 CCDC9Q9Y3X0 531 aaKnown RBP29.36■■■□□ 2.29
SMC6-210ENST00000621152 VPS72Q15906 364 aa29.35■■■□□ 2.29
SMC6-210ENST00000621152 NUTM2GQ5VZR2 741 aa29.34■■■□□ 2.29
SMC6-210ENST00000621152 ROCK2O75116 1388 aaKnown RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms