RNA–Protein interactions for RNA: ENST00000618521.4

SH2B1-216, Transcript of SH2B adaptor protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH2B1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-216ENST00000618521 FAM43AQ8N2R8 423 aa22.75■■□□□ 1.23
SH2B1-216ENST00000618521 ARHGEF40Q8TER5 1519 aa22.74■■□□□ 1.23
SH2B1-216ENST00000618521 C14orf93Q9H972 538 aaKnown RBP22.73■■□□□ 1.23
SH2B1-216ENST00000618521 PREX1Q8TCU6 1659 aa22.73■■□□□ 1.23
SH2B1-216ENST00000618521 MYO5BQ9ULV0 1848 aa22.72■■□□□ 1.23
SH2B1-216ENST00000618521 VGFO15240 615 aaPredicted RBP22.72■■□□□ 1.23
SH2B1-216ENST00000618521 IFT172Q9UG01 1749 aa22.72■■□□□ 1.23
SH2B1-216ENST00000618521 PIK3C2GO75747 1445 aa22.71■■□□□ 1.23
SH2B1-216ENST00000618521 ERVK-7P63135 1459 aa22.71■■□□□ 1.23
SH2B1-216ENST00000618521 IQGAP1P46940 1657 aa22.71■■□□□ 1.23
SH2B1-216ENST00000618521 C20orf194Q5TEA3 1177 aa22.71■■□□□ 1.23
SH2B1-216ENST00000618521 ZC3H13Q5T200 1668 aaKnown RBP22.71■■□□□ 1.23
SH2B1-216ENST00000618521 KNSTRNQ9Y448 316 aa22.71■■□□□ 1.23
SH2B1-216ENST00000618521 FRAT2O75474 233 aaPredicted RBP22.7■■□□□ 1.22
SH2B1-216ENST00000618521 PPLO60437 1756 aa22.69■■□□□ 1.22
SH2B1-216ENST00000618521 PIK3C2BO00750 1634 aa22.69■■□□□ 1.22
SH2B1-216ENST00000618521 EIF3AQ14152 1382 aaKnown RBP22.69■■□□□ 1.22
SH2B1-216ENST00000618521 ZMYM3Q14202 1370 aa22.69■■□□□ 1.22
SH2B1-216ENST00000618521 PPP2R1AP30153 589 aa22.68■■□□□ 1.22
SH2B1-216ENST00000618521 RPGRIP1LQ68CZ1 1315 aa22.68■■□□□ 1.22
SH2B1-216ENST00000618521 INSRP06213 1382 aa22.68■■□□□ 1.22
SH2B1-216ENST00000618521 AGLP35573 1532 aa22.68■■□□□ 1.22
SH2B1-216ENST00000618521 NRXN1Q9ULB1 1477 aa22.67■■□□□ 1.22
SH2B1-216ENST00000618521 NEXMIFQ5QGS0 1516 aa22.67■■□□□ 1.22
SH2B1-216ENST00000618521 CENPJQ9HC77 1338 aaPredicted RBP22.66■■□□□ 1.22
SH2B1-216ENST00000618521 WDR43Q15061 677 aaKnown RBP eCLIP22.66■■□□□ 1.221e-5■■□□□ 14.2
SH2B1-216ENST00000618521 NEURL4Q96JN8 1562 aa22.65■■□□□ 1.22
SH2B1-216ENST00000618521 PLEKHH1Q9ULM0 1364 aa22.65■■□□□ 1.22
SH2B1-216ENST00000618521 AMER1Q5JTC6 1135 aaPredicted RBP22.64■■□□□ 1.21
SH2B1-216ENST00000618521 REREQ9P2R6 1566 aa22.63■■□□□ 1.21
SH2B1-216ENST00000618521 TMEM131LA2VDJ0 1609 aa22.61■■□□□ 1.21
SH2B1-216ENST00000618521 DUSP27Q5VZP5 1158 aa22.61■■□□□ 1.21
SH2B1-216ENST00000618521 PPP6R1Q9UPN7 881 aa22.6■■□□□ 1.21
SH2B1-216ENST00000618521 KIAA1210Q9ULL0 1709 aa22.59■■□□□ 1.21
SH2B1-216ENST00000618521 ADGRB1O14514 1584 aa22.59■■□□□ 1.21
SH2B1-216ENST00000618521 CCDC146Q8IYE0 955 aa22.58■■□□□ 1.21
SH2B1-216ENST00000618521 CDCA8Q53HL2 280 aa22.58■■□□□ 1.2
SH2B1-216ENST00000618521 SLC12A5Q9H2X9 1139 aa22.57■■□□□ 1.2
SH2B1-216ENST00000618521 GOLGA2Q08379 1002 aa22.57■■□□□ 1.2
SH2B1-216ENST00000618521 MINK1Q8N4C8 1332 aaPredicted RBP22.57■■□□□ 1.2
SH2B1-216ENST00000618521 CABP2Q9NPB3 220 aa22.56■■□□□ 1.2
SH2B1-216ENST00000618521 RRAGDQ9NQL2 400 aaPredicted RBP22.56■■□□□ 1.2
SH2B1-216ENST00000618521 GLIPR1L2Q4G1C9 344 aa22.55■■□□□ 1.2
SH2B1-216ENST00000618521 VSIG10Q8N0Z9 540 aa22.55■■□□□ 1.2
SH2B1-216ENST00000618521 ZNF521Q96K83 1311 aa22.55■■□□□ 1.2
SH2B1-216ENST00000618521 PRAM1Q96QH2 718 aa22.54■■□□□ 1.2
SH2B1-216ENST00000618521 A2ML1A8K2U0 1454 aa22.54■■□□□ 1.2
SH2B1-216ENST00000618521 POGKQ9P215 609 aa22.53■■□□□ 1.2
SH2B1-216ENST00000618521 KDM2BQ8NHM5 1336 aa22.53■■□□□ 1.2
SH2B1-216ENST00000618521 CARD14Q9BXL6 1004 aa22.53■■□□□ 1.2
SH2B1-216ENST00000618521 ZMYND15Q9H091 742 aa22.53■■□□□ 1.2
SH2B1-216ENST00000618521 RIMS2Q9UQ26 1411 aa22.53■■□□□ 1.2
SH2B1-216ENST00000618521 ASXL1Q8IXJ9 1541 aa22.53■■□□□ 1.2
SH2B1-216ENST00000618521 TNRQ92752 1358 aa22.52■■□□□ 1.2
SH2B1-216ENST00000618521 SPATA31D1Q6ZQQ2 1576 aa22.52■■□□□ 1.2
SH2B1-216ENST00000618521 WAPLQ7Z5K2 1190 aa22.51■■□□□ 1.19
SH2B1-216ENST00000618521 DNAJC5Q9H3Z4 198 aa22.51■■□□□ 1.19
SH2B1-216ENST00000618521 TNNT2P45379 298 aaPredicted RBP22.51■■□□□ 1.19
SH2B1-216ENST00000618521 SPINK5Q9NQ38 1064 aaPredicted RBP22.5■■□□□ 1.19
SH2B1-216ENST00000618521 APAF1O14727 1248 aa22.5■■□□□ 1.19
SH2B1-216ENST00000618521 SLFN5Q08AF3 891 aa22.5■■□□□ 1.19
SH2B1-216ENST00000618521 SETBP1Q9Y6X0 1596 aa22.5■■□□□ 1.19
SH2B1-216ENST00000618521 SRPK2P78362 688 aaKnown RBP22.49■■□□□ 1.19
SH2B1-216ENST00000618521 CENPQQ7L2Z9 268 aaPredicted RBP22.48■■□□□ 1.19
SH2B1-216ENST00000618521 MYOM1P52179 1685 aa22.47■■□□□ 1.19
SH2B1-216ENST00000618521 QRICH2Q9H0J4 1663 aa22.47■■□□□ 1.19
SH2B1-216ENST00000618521 KDM5AP29375 1690 aaKnown RBP22.47■■□□□ 1.19
SH2B1-216ENST00000618521 C8orf34Q49A92 452 aa22.46■■□□□ 1.19
SH2B1-216ENST00000618521 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.46■■□□□ 1.19
SH2B1-216ENST00000618521 FAM161AQ3B820 660 aa22.45■■□□□ 1.18
SH2B1-216ENST00000618521 YTHDC2Q9H6S0 1430 aaKnown RBP22.45■■□□□ 1.18
SH2B1-216ENST00000618521 ZFYVE9O95405 1425 aa22.44■■□□□ 1.18
SH2B1-216ENST00000618521 TXNDC2Q86VQ3 553 aa22.44■■□□□ 1.18
SH2B1-216ENST00000618521 ALKQ9UM73 1620 aa22.44■■□□□ 1.18
SH2B1-216ENST00000618521 BCAR3O75815 825 aa22.44■■□□□ 1.18
SH2B1-216ENST00000618521 EVC2Q86UK5 1308 aa22.43■■□□□ 1.18
SH2B1-216ENST00000618521 RGS3P49796 1198 aa22.43■■□□□ 1.18
SH2B1-216ENST00000618521 LTKP29376 864 aa22.42■■□□□ 1.18
SH2B1-216ENST00000618521 DMRT2Q9Y5R5 561 aa22.42■■□□□ 1.18
SH2B1-216ENST00000618521 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
SH2B1-216ENST00000618521 TRMT2AQ8IZ69 625 aaKnown RBP22.41■■□□□ 1.18
SH2B1-216ENST00000618521 NAP1L5Q96NT1 182 aaPredicted RBP22.41■■□□□ 1.18
SH2B1-216ENST00000618521 METP08581 1390 aa22.41■■□□□ 1.18
SH2B1-216ENST00000618521 ARHGEF28Q8N1W1 1705 aaKnown RBP22.41■■□□□ 1.18
SH2B1-216ENST00000618521 NPC1L1Q9UHC9 1359 aa22.41■■□□□ 1.18
SH2B1-216ENST00000618521 PTPRMP28827 1452 aa22.4■■□□□ 1.18
SH2B1-216ENST00000618521 ARXQ96QS3 562 aa22.4■■□□□ 1.18
SH2B1-216ENST00000618521 SBNO2Q9Y2G9 1366 aa22.4■■□□□ 1.18
SH2B1-216ENST00000618521 TULP4Q9NRJ4 1543 aa22.39■■□□□ 1.17
SH2B1-216ENST00000618521 NSD3Q9BZ95 1437 aa22.39■■□□□ 1.17
SH2B1-216ENST00000618521 MYO3AQ8NEV4 1616 aa22.39■■□□□ 1.17
SH2B1-216ENST00000618521 HSP90AA2PQ14568 343 aaPredicted RBP22.37■■□□□ 1.17
SH2B1-216ENST00000618521 NKTRP30414 1462 aaKnown RBP22.37■■□□□ 1.17
SH2B1-216ENST00000618521 CDK19Q9BWU1 502 aa22.36■■□□□ 1.17
SH2B1-216ENST00000618521 TMEM2Q9UHN6 1383 aa22.36■■□□□ 1.17
SH2B1-216ENST00000618521 NUTM2FA1L443 756 aa22.35■■□□□ 1.17
SH2B1-216ENST00000618521 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.35■■□□□ 1.17
SH2B1-216ENST00000618521 E9PSI1 815 aa22.34■■□□□ 1.17
SH2B1-216ENST00000618521 NCKAP5LQ9HCH0 1330 aa22.34■■□□□ 1.17
SH2B1-216ENST00000618521 L1TD1Q5T7N2 865 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms