RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 ORAI2Q96SN7 254 aa32.38■■■□□ 2.77
SYNGR3-206ENST00000618464 WAPLQ7Z5K2 1190 aa32.37■■■□□ 2.77
SYNGR3-206ENST00000618464 TECPR2O15040 1411 aa32.36■■■□□ 2.77
SYNGR3-206ENST00000618464 PNPLA6Q8IY17 1366 aa32.36■■■□□ 2.77
SYNGR3-206ENST00000618464 CFAP70Q5T0N1 1121 aa32.36■■■□□ 2.77
SYNGR3-206ENST00000618464 YTHDC2Q9H6S0 1430 aaKnown RBP32.35■■■□□ 2.77
SYNGR3-206ENST00000618464 C14orf93Q9H972 538 aaKnown RBP32.35■■■□□ 2.77
SYNGR3-206ENST00000618464 KNDC1Q76NI1 1749 aa32.34■■■□□ 2.77
SYNGR3-206ENST00000618464 ABCC11Q96J66 1382 aa32.34■■■□□ 2.77
SYNGR3-206ENST00000618464 PLEKHH1Q9ULM0 1364 aa32.33■■■□□ 2.77
SYNGR3-206ENST00000618464 AFF2P51816 1311 aa32.33■■■□□ 2.77
SYNGR3-206ENST00000618464 LAMC1P11047 1609 aa32.32■■■□□ 2.76
SYNGR3-206ENST00000618464 KDM2AQ9Y2K7 1162 aa32.31■■■□□ 2.76
SYNGR3-206ENST00000618464 RXRBP28702 533 aa32.3■■■□□ 2.76
SYNGR3-206ENST00000618464 CDC42BPGQ6DT37 1551 aa32.3■■■□□ 2.76
SYNGR3-206ENST00000618464 DCAF11Q8TEB1 546 aa32.28■■■□□ 2.76
SYNGR3-206ENST00000618464 SOS2Q07890 1332 aaPredicted RBP32.27■■■□□ 2.76
SYNGR3-206ENST00000618464 C8orf37Q96NL8 207 aa32.27■■■□□ 2.76
SYNGR3-206ENST00000618464 DHX57Q6P158 1386 aaKnown RBP32.27■■■□□ 2.76
SYNGR3-206ENST00000618464 NUTM2FA1L443 756 aa32.24■■■□□ 2.75
SYNGR3-206ENST00000618464 ADAMTS2O95450 1211 aa32.22■■■□□ 2.75
SYNGR3-206ENST00000618464 ESCO1Q5FWF5 840 aa32.21■■■□□ 2.75
SYNGR3-206ENST00000618464 UPF1Q92900 1129 aaKnown RBP eCLIP32.2■■■□□ 2.757e-6■■■■□ 22.8
SYNGR3-206ENST00000618464 SAFB2Q14151 953 aaKnown RBP eCLIP32.19■■■□□ 2.74
SYNGR3-206ENST00000618464 SIRT1Q96EB6 747 aa32.18■■■□□ 2.74
SYNGR3-206ENST00000618464 QTRT2Q9H974 415 aaKnown RBP32.18■■■□□ 2.74
SYNGR3-206ENST00000618464 CDK12Q9NYV4 1490 aaPredicted RBP32.17■■■□□ 2.74
SYNGR3-206ENST00000618464 PRAM1Q96QH2 718 aa32.17■■■□□ 2.74
SYNGR3-206ENST00000618464 ADGRB1O14514 1584 aa32.16■■■□□ 2.74
SYNGR3-206ENST00000618464 NGLY1Q96IV0 654 aa32.16■■■□□ 2.74
SYNGR3-206ENST00000618464 FMN2Q9NZ56 1722 aa32.15■■■□□ 2.74
SYNGR3-206ENST00000618464 POGKQ9P215 609 aa32.13■■■□□ 2.73
SYNGR3-206ENST00000618464 TRAK1Q9UPV9 953 aa32.13■■■□□ 2.73
SYNGR3-206ENST00000618464 DLC1Q96QB1 1528 aa32.12■■■□□ 2.73
SYNGR3-206ENST00000618464 NPHP3Q7Z494 1330 aa32.12■■■□□ 2.73
SYNGR3-206ENST00000618464 FOXO3O43524 673 aa32.12■■■□□ 2.73
SYNGR3-206ENST00000618464 RBM6P78332 1123 aaKnown RBP32.12■■■□□ 2.73
SYNGR3-206ENST00000618464 STAC3Q96MF2 364 aa32.12■■■□□ 2.73
SYNGR3-206ENST00000618464 XPCQ01831 940 aaPredicted RBP32.11■■■□□ 2.73
SYNGR3-206ENST00000618464 PXDNQ92626 1479 aa32.1■■■□□ 2.73
SYNGR3-206ENST00000618464 COL22A1Q8NFW1 1626 aaPredicted RBP32.09■■■□□ 2.73
SYNGR3-206ENST00000618464 RGS12O14924 1447 aa32.09■■■□□ 2.73
SYNGR3-206ENST00000618464 USP21Q9UK80 565 aa32.06■■■□□ 2.72
SYNGR3-206ENST00000618464 FNBP4Q8N3X1 1017 aaPredicted RBP32.03■■■□□ 2.72
SYNGR3-206ENST00000618464 RGPD8O14715 1765 aaPredicted RBP32.02■■■□□ 2.72
SYNGR3-206ENST00000618464 HIRIP3Q9BW71 556 aaPredicted RBP32.02■■■□□ 2.72
SYNGR3-206ENST00000618464 KIF1AQ12756 1690 aa32.01■■■□□ 2.71
SYNGR3-206ENST00000618464 MINK1Q8N4C8 1332 aaPredicted RBP32■■■□□ 2.71
SYNGR3-206ENST00000618464 ADGRB2O60241 1585 aa31.98■■■□□ 2.71
SYNGR3-206ENST00000618464 TRPC5Q9UL62 973 aaPredicted RBP31.98■■■□□ 2.71
SYNGR3-206ENST00000618464 PHF8Q9UPP1 1060 aa31.97■■■□□ 2.71
SYNGR3-206ENST00000618464 ARHGEF28Q8N1W1 1705 aaKnown RBP31.95■■■□□ 2.7
SYNGR3-206ENST00000618464 SIN3AQ96ST3 1273 aa31.94■■■□□ 2.7
SYNGR3-206ENST00000618464 USP32Q8NFA0 1604 aa31.93■■■□□ 2.7
SYNGR3-206ENST00000618464 ATRNO75882 1429 aa31.93■■■□□ 2.7
SYNGR3-206ENST00000618464 KRT28Q7Z3Y7 464 aa31.93■■■□□ 2.7
SYNGR3-206ENST00000618464 SPATA31A3Q5VYP0 1347 aa31.93■■■□□ 2.7
SYNGR3-206ENST00000618464 BCL9LQ86UU0 1499 aa31.92■■■□□ 2.7
SYNGR3-206ENST00000618464 KIAA1210Q9ULL0 1709 aa31.92■■■□□ 2.7
SYNGR3-206ENST00000618464 MARF1Q9Y4F3 1742 aaKnown RBP31.92■■■□□ 2.7
SYNGR3-206ENST00000618464 ANKARQ7Z5J8 1434 aa31.92■■■□□ 2.7
SYNGR3-206ENST00000618464 PMFBP1Q8TBY8 1022 aa31.9■■■□□ 2.7
SYNGR3-206ENST00000618464 NEUROD1Q13562 356 aa31.89■■■□□ 2.7
SYNGR3-206ENST00000618464 NBPF1Q3BBV0 1214 aa31.89■■■□□ 2.7
SYNGR3-206ENST00000618464 WASLO00401 505 aaPredicted RBP31.88■■■□□ 2.69
SYNGR3-206ENST00000618464 L3MBTL2Q969R5 705 aa31.88■■■□□ 2.69
SYNGR3-206ENST00000618464 EIF3AQ14152 1382 aaKnown RBP31.86■■■□□ 2.69
SYNGR3-206ENST00000618464 PRR36Q9H6K5 1346 aa31.86■■■□□ 2.69
SYNGR3-206ENST00000618464 TULP4Q9NRJ4 1543 aa31.85■■■□□ 2.69
SYNGR3-206ENST00000618464 PSME1Q06323 249 aa31.85■■■□□ 2.69
SYNGR3-206ENST00000618464 TNS3Q68CZ2 1445 aa31.83■■■□□ 2.69
SYNGR3-206ENST00000618464 PLEKHG5O94827 1062 aa31.82■■■□□ 2.68
SYNGR3-206ENST00000618464 ATAD2Q6PL18 1390 aa31.81■■■□□ 2.68
SYNGR3-206ENST00000618464 GJD4Q96KN9 370 aaPredicted RBP31.81■■■□□ 2.68
SYNGR3-206ENST00000618464 LMOD2Q6P5Q4 547 aa31.8■■■□□ 2.68
SYNGR3-206ENST00000618464 CABLES1Q8TDN4 633 aa31.8■■■□□ 2.68
SYNGR3-206ENST00000618464 SLIT2O94813 1529 aa31.78■■■□□ 2.68
SYNGR3-206ENST00000618464 SBNO1A3KN83 1393 aa31.78■■■□□ 2.68
SYNGR3-206ENST00000618464 TRIM26Q12899 539 aaPredicted RBP31.77■■■□□ 2.68
SYNGR3-206ENST00000618464 UNC5CLQ8IV45 518 aa31.77■■■□□ 2.68
SYNGR3-206ENST00000618464 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.75■■■□□ 2.67
SYNGR3-206ENST00000618464 CDK19Q9BWU1 502 aa31.75■■■□□ 2.67
SYNGR3-206ENST00000618464 ATP7BP35670 1465 aa31.74■■■□□ 2.67
SYNGR3-206ENST00000618464 HAP1P54257 671 aaPredicted RBP31.74■■■□□ 2.67
SYNGR3-206ENST00000618464 NUDT16Q96DE0 195 aaKnown RBP31.74■■■□□ 2.67
SYNGR3-206ENST00000618464 GPRASP1Q5JY77 1395 aa31.73■■■□□ 2.67
SYNGR3-206ENST00000618464 NGDNQ8NEJ9 315 aaKnown RBP31.73■■■□□ 2.67
SYNGR3-206ENST00000618464 ARHGEF10O15013 1369 aa31.72■■■□□ 2.67
SYNGR3-206ENST00000618464 GLI3P10071 1580 aa31.71■■■□□ 2.67
SYNGR3-206ENST00000618464 TRPM3Q9HCF6 1732 aaPredicted RBP31.71■■■□□ 2.67
SYNGR3-206ENST00000618464 RALGAPBQ86X10 1494 aa31.71■■■□□ 2.67
SYNGR3-206ENST00000618464 ITSN1Q15811 1721 aa31.7■■■□□ 2.67
SYNGR3-206ENST00000618464 TRPM1Q7Z4N2 1603 aa31.7■■■□□ 2.66
SYNGR3-206ENST00000618464 CENPJQ9HC77 1338 aaPredicted RBP31.7■■■□□ 2.66
SYNGR3-206ENST00000618464 ABCA3Q99758 1704 aa31.67■■■□□ 2.66
SYNGR3-206ENST00000618464 EP400Q96L91 3159 aa31.65■■■□□ 2.66
SYNGR3-206ENST00000618464 QRICH2Q9H0J4 1663 aa31.65■■■□□ 2.66
SYNGR3-206ENST00000618464 PAK3O75914 559 aaPredicted RBP31.64■■■□□ 2.66
SYNGR3-206ENST00000618464 ROCK2O75116 1388 aaKnown RBP31.64■■■□□ 2.66
SYNGR3-206ENST00000618464 ALS2Q96Q42 1657 aa31.64■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms