RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 FRAT1Q92837 279 aaPredicted RBP10.36□□□□□ -0.75
CHD7-212ENST00000618450 WWC1Q8IX03 1113 aa10.36□□□□□ -0.75
CHD7-212ENST00000618450 NEXMIFQ5QGS0 1516 aa10.36□□□□□ -0.75
CHD7-212ENST00000618450 KNSTRNQ9Y448 316 aa10.35□□□□□ -0.75
CHD7-212ENST00000618450 APAF1O14727 1248 aa10.35□□□□□ -0.75
CHD7-212ENST00000618450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.35□□□□□ -0.754e-8■■■■□ 25.6
CHD7-212ENST00000618450 CDC42BPGQ6DT37 1551 aa10.35□□□□□ -0.75
CHD7-212ENST00000618450 E9PSI1 815 aa10.35□□□□□ -0.75
CHD7-212ENST00000618450 BRPF3Q9ULD4 1205 aa10.35□□□□□ -0.75
CHD7-212ENST00000618450 ABCC3O15438 1527 aa10.34□□□□□ -0.75
CHD7-212ENST00000618450 CCDC27Q2M243 656 aa10.34□□□□□ -0.75
CHD7-212ENST00000618450 RTL5Q5HYW3 569 aaPredicted RBP10.34□□□□□ -0.75
CHD7-212ENST00000618450 AFAP1Q8N556 730 aa10.34□□□□□ -0.75
CHD7-212ENST00000618450 CD163L1Q9NR16 1453 aa10.34□□□□□ -0.75
CHD7-212ENST00000618450 FRAT2O75474 233 aaPredicted RBP10.34□□□□□ -0.75
CHD7-212ENST00000618450 RLBP1P12271 317 aa10.33□□□□□ -0.76
CHD7-212ENST00000618450 CD109Q6YHK3 1445 aa10.33□□□□□ -0.76
CHD7-212ENST00000618450 EFCAB2Q5VUJ9 269 aa10.33□□□□□ -0.76
CHD7-212ENST00000618450 CCDC146Q8IYE0 955 aa10.33□□□□□ -0.76
CHD7-212ENST00000618450 NCOA3Q9Y6Q9 1424 aa10.33□□□□□ -0.76
CHD7-212ENST00000618450 NPATQ14207 1427 aa10.32□□□□□ -0.76
CHD7-212ENST00000618450 MYO5BQ9ULV0 1848 aa10.32□□□□□ -0.76
CHD7-212ENST00000618450 RARSP54136 660 aaKnown RBP10.32□□□□□ -0.76
CHD7-212ENST00000618450 CDCA8Q53HL2 280 aa10.32□□□□□ -0.76
CHD7-212ENST00000618450 CFAP70Q5T0N1 1121 aa10.32□□□□□ -0.76
CHD7-212ENST00000618450 PCDHB15Q9Y5E8 787 aa10.32□□□□□ -0.76
CHD7-212ENST00000618450 DDIT3P35638 169 aa10.31□□□□□ -0.76
CHD7-212ENST00000618450 SETD1AO15047 1707 aaKnown RBP10.31□□□□□ -0.76
CHD7-212ENST00000618450 NOS1P29475 1434 aa10.31□□□□□ -0.76
CHD7-212ENST00000618450 TNNQ9UQP3 1299 aa10.31□□□□□ -0.76
CHD7-212ENST00000618450 CGNL1Q0VF96 1302 aa10.31□□□□□ -0.76
CHD7-212ENST00000618450 CLUAP1Q96AJ1 413 aa10.31□□□□□ -0.76
CHD7-212ENST00000618450 SPAG9O60271 1321 aaKnown RBP10.3□□□□□ -0.76
CHD7-212ENST00000618450 WDR43Q15061 677 aaKnown RBP eCLIP10.3□□□□□ -0.76
CHD7-212ENST00000618450 MED14O60244 1454 aa10.3□□□□□ -0.76
CHD7-212ENST00000618450 TBC1D32Q96NH3 1257 aa10.29□□□□□ -0.76
CHD7-212ENST00000618450 NSD3Q9BZ95 1437 aa10.29□□□□□ -0.76
CHD7-212ENST00000618450 PRKCSHP14314 528 aaPredicted RBP10.29□□□□□ -0.76
CHD7-212ENST00000618450 PLEKHF1Q96S99 279 aa10.29□□□□□ -0.76
CHD7-212ENST00000618450 ZNF692Q9BU19 519 aaPredicted RBP10.29□□□□□ -0.76
CHD7-212ENST00000618450 PUS7Q96PZ0 661 aaKnown RBP10.29□□□□□ -0.76
CHD7-212ENST00000618450 MLH3Q9UHC1 1453 aa10.29□□□□□ -0.76
CHD7-212ENST00000618450 C14orf93Q9H972 538 aaKnown RBP10.28□□□□□ -0.76
CHD7-212ENST00000618450 KIF20BQ96Q89 1820 aa10.28□□□□□ -0.76
CHD7-212ENST00000618450 AAMPQ13685 434 aa10.28□□□□□ -0.76
CHD7-212ENST00000618450 WDR63Q8IWG1 891 aa10.28□□□□□ -0.76
CHD7-212ENST00000618450 PANK1Q8TE04 598 aa10.28□□□□□ -0.76
CHD7-212ENST00000618450 TMEM131LA2VDJ0 1609 aa10.27□□□□□ -0.76
CHD7-212ENST00000618450 PTPRMP28827 1452 aa10.27□□□□□ -0.77
CHD7-212ENST00000618450 FSD2A1L4K1 749 aa10.27□□□□□ -0.77
CHD7-212ENST00000618450 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.27□□□□□ -0.77
CHD7-212ENST00000618450 MAPK8IP3Q9UPT6 1336 aa10.27□□□□□ -0.77
CHD7-212ENST00000618450 KNDC1Q76NI1 1749 aa10.26□□□□□ -0.77
CHD7-212ENST00000618450 PNPLA6Q8IY17 1366 aa10.26□□□□□ -0.77
CHD7-212ENST00000618450 ZFYVE9O95405 1425 aa10.26□□□□□ -0.77
CHD7-212ENST00000618450 RICTORQ6R327 1708 aa10.26□□□□□ -0.77
CHD7-212ENST00000618450 SLC24A1O60721 1099 aa10.25□□□□□ -0.77
CHD7-212ENST00000618450 TUBGCP6Q96RT7 1819 aa10.25□□□□□ -0.77
CHD7-212ENST00000618450 CFAP74Q9C0B2 1584 aa10.25□□□□□ -0.77
CHD7-212ENST00000618450 CFAP65Q6ZU64 1925 aaKnown RBP10.25□□□□□ -0.77
CHD7-212ENST00000618450 CENPJQ9HC77 1338 aaPredicted RBP10.24□□□□□ -0.77
CHD7-212ENST00000618450 ARHGAP31Q2M1Z3 1444 aa10.24□□□□□ -0.77
CHD7-212ENST00000618450 POGKQ9P215 609 aa10.24□□□□□ -0.77
CHD7-212ENST00000618450 ANKRD36BQ8N2N9 1353 aa10.24□□□□□ -0.77
CHD7-212ENST00000618450 ABCC11Q96J66 1382 aa10.24□□□□□ -0.77
CHD7-212ENST00000618450 RUNDC1Q96C34 613 aa10.24□□□□□ -0.77
CHD7-212ENST00000618450 COG6Q9Y2V7 657 aa10.24□□□□□ -0.77
CHD7-212ENST00000618450 NSD2O96028 1365 aa10.24□□□□□ -0.77
CHD7-212ENST00000618450 PPIP5K1Q6PFW1 1433 aa10.24□□□□□ -0.77
CHD7-212ENST00000618450 POGZQ7Z3K3 1410 aa10.24□□□□□ -0.77
CHD7-212ENST00000618450 TBC1D2Q9BYX2 928 aa10.24□□□□□ -0.77
CHD7-212ENST00000618450 YEATS2Q9ULM3 1422 aa10.24□□□□□ -0.77
CHD7-212ENST00000618450 DLG5Q8TDM6 1919 aa10.24□□□□□ -0.77
CHD7-212ENST00000618450 RGS3P49796 1198 aa10.23□□□□□ -0.77
CHD7-212ENST00000618450 TCP11L2Q8N4U5 519 aa10.23□□□□□ -0.77
CHD7-212ENST00000618450 DIP2CQ9Y2E4 1556 aa10.23□□□□□ -0.77
CHD7-212ENST00000618450 RIMBP3CA6NJZ7 1639 aa10.23□□□□□ -0.77
CHD7-212ENST00000618450 RIMBP3BA6NNM3 1639 aa10.23□□□□□ -0.77
CHD7-212ENST00000618450 RIMBP3Q9UFD9 1639 aa10.23□□□□□ -0.77
CHD7-212ENST00000618450 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
CHD7-212ENST00000618450 PREX1Q8TCU6 1659 aa10.22□□□□□ -0.77
CHD7-212ENST00000618450 FAM43AQ8N2R8 423 aa10.22□□□□□ -0.77
CHD7-212ENST00000618450 SLC12A5Q9H2X9 1139 aa10.22□□□□□ -0.77
CHD7-212ENST00000618450 RTN4Q9NQC3 1192 aaKnown RBP10.22□□□□□ -0.77
CHD7-212ENST00000618450 ASXL2Q76L83 1435 aa10.22□□□□□ -0.77
CHD7-212ENST00000618450 HDAC1Q13547 482 aaPredicted RBP10.21□□□□□ -0.78
CHD7-212ENST00000618450 PDZRN3Q9UPQ7 1066 aa10.21□□□□□ -0.78
CHD7-212ENST00000618450 PIK3R4Q99570 1358 aa10.21□□□□□ -0.78
CHD7-212ENST00000618450 LRRC7Q96NW7 1537 aa10.2□□□□□ -0.78
CHD7-212ENST00000618450 KIF2CQ99661 725 aa10.2□□□□□ -0.78
CHD7-212ENST00000618450 ARHGEF40Q8TER5 1519 aa10.2□□□□□ -0.78
CHD7-212ENST00000618450 MVPQ14764 893 aaKnown RBP10.2□□□□□ -0.78
CHD7-212ENST00000618450 RRAGDQ9NQL2 400 aaPredicted RBP10.19□□□□□ -0.78
CHD7-212ENST00000618450 BRPF1P55201 1214 aaPredicted RBP10.19□□□□□ -0.78
CHD7-212ENST00000618450 SMC5Q8IY18 1101 aa10.19□□□□□ -0.78
CHD7-212ENST00000618450 REREQ9P2R6 1566 aa10.19□□□□□ -0.78
CHD7-212ENST00000618450 KIF3BO15066 747 aa10.18□□□□□ -0.78
CHD7-212ENST00000618450 RPGRIP1LQ68CZ1 1315 aa10.18□□□□□ -0.78
CHD7-212ENST00000618450 MAP2P11137 1827 aaKnown RBP10.18□□□□□ -0.78
CHD7-212ENST00000618450 A0A1W2PP64 1363 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms