RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 PLEKHH1Q9ULM0 1364 aa22.38■■□□□ 1.17
SRGAP2C-205ENST00000617209 COL16A1Q07092 1604 aaPredicted RBP22.38■■□□□ 1.17
SRGAP2C-205ENST00000617209 L3MBTL2Q969R5 705 aa22.37■■□□□ 1.17
SRGAP2C-205ENST00000617209 NHSL1Q5SYE7 1610 aa22.35■■□□□ 1.17
SRGAP2C-205ENST00000617209 MED1Q15648 1581 aaPredicted RBP22.35■■□□□ 1.17
SRGAP2C-205ENST00000617209 PRAM1Q96QH2 718 aa22.35■■□□□ 1.17
SRGAP2C-205ENST00000617209 TRAK1Q9UPV9 953 aa22.34■■□□□ 1.17
SRGAP2C-205ENST00000617209 JCADQ9P266 1359 aa22.34■■□□□ 1.17
SRGAP2C-205ENST00000617209 NEUROD1Q13562 356 aa22.33■■□□□ 1.17
SRGAP2C-205ENST00000617209 ORAI2Q96SN7 254 aa22.33■■□□□ 1.17
SRGAP2C-205ENST00000617209 POGKQ9P215 609 aa22.33■■□□□ 1.17
SRGAP2C-205ENST00000617209 FMN2Q9NZ56 1722 aa22.31■■□□□ 1.16
SRGAP2C-205ENST00000617209 LRRC59Q96AG4 307 aaKnown RBP22.29■■□□□ 1.16
SRGAP2C-205ENST00000617209 SHPRHQ149N8 1683 aa22.27■■□□□ 1.16
SRGAP2C-205ENST00000617209 NBPF1Q3BBV0 1214 aa22.27■■□□□ 1.16
SRGAP2C-205ENST00000617209 ESCO1Q5FWF5 840 aa22.27■■□□□ 1.16
SRGAP2C-205ENST00000617209 ARHGEF28Q8N1W1 1705 aaKnown RBP22.27■■□□□ 1.16
SRGAP2C-205ENST00000617209 SOS2Q07890 1332 aaPredicted RBP22.27■■□□□ 1.16
SRGAP2C-205ENST00000617209 SPATA31A6Q5VVP1 1343 aa22.27■■□□□ 1.16
SRGAP2C-205ENST00000617209 ADGRB2O60241 1585 aa22.26■■□□□ 1.15
SRGAP2C-205ENST00000617209 SAFB2Q14151 953 aaKnown RBP eCLIP22.26■■□□□ 1.15
SRGAP2C-205ENST00000617209 DDX17Q92841 729 aaKnown RBP22.25■■□□□ 1.15
SRGAP2C-205ENST00000617209 NUTM2FA1L443 756 aa22.23■■□□□ 1.15
SRGAP2C-205ENST00000617209 NPHP3Q7Z494 1330 aa22.23■■□□□ 1.15
SRGAP2C-205ENST00000617209 RGPD8O14715 1765 aaPredicted RBP22.22■■□□□ 1.15
SRGAP2C-205ENST00000617209 TRPM1Q7Z4N2 1603 aa22.21■■□□□ 1.15
SRGAP2C-205ENST00000617209 ANKARQ7Z5J8 1434 aa22.21■■□□□ 1.15
SRGAP2C-205ENST00000617209 KIF1AQ12756 1690 aa22.2■■□□□ 1.15
SRGAP2C-205ENST00000617209 WASLO00401 505 aaPredicted RBP22.2■■□□□ 1.14
SRGAP2C-205ENST00000617209 FOXO3O43524 673 aa22.2■■□□□ 1.14
SRGAP2C-205ENST00000617209 PHF23Q9BUL5 403 aaPredicted RBP22.2■■□□□ 1.14
SRGAP2C-205ENST00000617209 PCGF6Q9BYE7 350 aa22.2■■□□□ 1.14
SRGAP2C-205ENST00000617209 MINK1Q8N4C8 1332 aaPredicted RBP22.2■■□□□ 1.14
SRGAP2C-205ENST00000617209 EIF3AQ14152 1382 aaKnown RBP22.19■■□□□ 1.14
SRGAP2C-205ENST00000617209 TONSLQ96HA7 1378 aa22.18■■□□□ 1.14
SRGAP2C-205ENST00000617209 HIRIP3Q9BW71 556 aaPredicted RBP22.18■■□□□ 1.14
SRGAP2C-205ENST00000617209 PNPLA6Q8IY17 1366 aa22.17■■□□□ 1.14
SRGAP2C-205ENST00000617209 ILDR2Q71H61 639 aa22.17■■□□□ 1.14
SRGAP2C-205ENST00000617209 PHF8Q9UPP1 1060 aa22.17■■□□□ 1.14
SRGAP2C-205ENST00000617209 USP32Q8NFA0 1604 aa22.17■■□□□ 1.14
SRGAP2C-205ENST00000617209 PXDNQ92626 1479 aa22.16■■□□□ 1.14
SRGAP2C-205ENST00000617209 NBPF8Q3BBV2 869 aa22.16■■□□□ 1.14
SRGAP2C-205ENST00000617209 RGS17Q9UGC6 210 aaPredicted RBP22.15■■□□□ 1.14
SRGAP2C-205ENST00000617209 CLSPNQ9HAW4 1339 aa22.14■■□□□ 1.14
SRGAP2C-205ENST00000617209 TULP4Q9NRJ4 1543 aa22.14■■□□□ 1.13
SRGAP2C-205ENST00000617209 LRP6O75581 1613 aa22.13■■□□□ 1.13
SRGAP2C-205ENST00000617209 CENPJQ9HC77 1338 aaPredicted RBP22.13■■□□□ 1.13
SRGAP2C-205ENST00000617209 GPRASP1Q5JY77 1395 aa22.12■■□□□ 1.13
SRGAP2C-205ENST00000617209 ROCK2O75116 1388 aaKnown RBP22.12■■□□□ 1.13
SRGAP2C-205ENST00000617209 PRR36Q9H6K5 1346 aa22.11■■□□□ 1.13
SRGAP2C-205ENST00000617209 KRT28Q7Z3Y7 464 aa22.11■■□□□ 1.13
SRGAP2C-205ENST00000617209 COL22A1Q8NFW1 1626 aaPredicted RBP22.1■■□□□ 1.13
SRGAP2C-205ENST00000617209 PSME1Q06323 249 aa22.1■■□□□ 1.13
SRGAP2C-205ENST00000617209 CDK19Q9BWU1 502 aa22.1■■□□□ 1.13
SRGAP2C-205ENST00000617209 SPATA31A3Q5VYP0 1347 aa22.08■■□□□ 1.13
SRGAP2C-205ENST00000617209 NUTM2BA6NNL0 878 aaPredicted RBP22.08■■□□□ 1.13
SRGAP2C-205ENST00000617209 NUTM2EB1AL46 878 aaPredicted RBP22.08■■□□□ 1.13
SRGAP2C-205ENST00000617209 XPCQ01831 940 aaPredicted RBP22.08■■□□□ 1.13
SRGAP2C-205ENST00000617209 NUTM2AQ8IVF1 878 aaPredicted RBP22.08■■□□□ 1.13
SRGAP2C-205ENST00000617209 NUDT16Q96DE0 195 aaKnown RBP22.08■■□□□ 1.13
SRGAP2C-205ENST00000617209 TIMELESSQ9UNS1 1208 aa22.08■■□□□ 1.13
SRGAP2C-205ENST00000617209 ITSN1Q15811 1721 aa22.08■■□□□ 1.12
SRGAP2C-205ENST00000617209 MEX3CQ5U5Q3 659 aaKnown RBP22.07■■□□□ 1.12
SRGAP2C-205ENST00000617209 PMFBP1Q8TBY8 1022 aa22.07■■□□□ 1.12
SRGAP2C-205ENST00000617209 QRICH2Q9H0J4 1663 aa22.07■■□□□ 1.12
SRGAP2C-205ENST00000617209 SBNO1A3KN83 1393 aa22.06■■□□□ 1.12
SRGAP2C-205ENST00000617209 ATP7BP35670 1465 aa22.06■■□□□ 1.12
SRGAP2C-205ENST00000617209 RALGAPBQ86X10 1494 aa22.05■■□□□ 1.12
SRGAP2C-205ENST00000617209 CCDC61Q9Y6R9 512 aa22.05■■□□□ 1.12
SRGAP2C-205ENST00000617209 ZNF772Q68DY9 489 aaPredicted RBP22.03■■□□□ 1.12
SRGAP2C-205ENST00000617209 PLEKHG3A1L390 1219 aa22.02■■□□□ 1.12
SRGAP2C-205ENST00000617209 POTEAQ6S8J7 498 aa22.02■■□□□ 1.12
SRGAP2C-205ENST00000617209 CARD11Q9BXL7 1154 aa22.02■■□□□ 1.12
SRGAP2C-205ENST00000617209 TNS3Q68CZ2 1445 aa22.01■■□□□ 1.11
SRGAP2C-205ENST00000617209 NGDNQ8NEJ9 315 aaKnown RBP22.01■■□□□ 1.11
SRGAP2C-205ENST00000617209 TOPAZ1Q8N9V7 1692 aa22.01■■□□□ 1.11
SRGAP2C-205ENST00000617209 SBNO2Q9Y2G9 1366 aa21.99■■□□□ 1.11
SRGAP2C-205ENST00000617209 SOCS7O14512 581 aa21.99■■□□□ 1.11
SRGAP2C-205ENST00000617209 SRPK2P78362 688 aaKnown RBP21.99■■□□□ 1.11
SRGAP2C-205ENST00000617209 TRPM3Q9HCF6 1732 aaPredicted RBP21.99■■□□□ 1.11
SRGAP2C-205ENST00000617209 EVC2Q86UK5 1308 aa21.99■■□□□ 1.11
SRGAP2C-205ENST00000617209 POLR3AO14802 1390 aaPredicted RBP21.99■■□□□ 1.11
SRGAP2C-205ENST00000617209 ARHGEF10O15013 1369 aa21.99■■□□□ 1.11
SRGAP2C-205ENST00000617209 ADAMTS2O95450 1211 aa21.97■■□□□ 1.11
SRGAP2C-205ENST00000617209 C8orf37Q96NL8 207 aa21.97■■□□□ 1.11
SRGAP2C-205ENST00000617209 MARF1Q9Y4F3 1742 aaKnown RBP21.97■■□□□ 1.11
SRGAP2C-205ENST00000617209 NGLY1Q96IV0 654 aa21.96■■□□□ 1.11
SRGAP2C-205ENST00000617209 CABP2Q9NPB3 220 aa21.96■■□□□ 1.11
SRGAP2C-205ENST00000617209 AFF2P51816 1311 aa21.96■■□□□ 1.11
SRGAP2C-205ENST00000617209 ALS2Q96Q42 1657 aa21.95■■□□□ 1.1
SRGAP2C-205ENST00000617209 ACEP12821 1306 aa21.95■■□□□ 1.1
SRGAP2C-205ENST00000617209 FNBP4Q8N3X1 1017 aaPredicted RBP21.94■■□□□ 1.1
SRGAP2C-205ENST00000617209 PPIP5K1Q6PFW1 1433 aa21.92■■□□□ 1.1
SRGAP2C-205ENST00000617209 LMOD2Q6P5Q4 547 aa21.92■■□□□ 1.1
SRGAP2C-205ENST00000617209 CCER1Q8TC90 406 aaPredicted RBP21.92■■□□□ 1.1
SRGAP2C-205ENST00000617209 SLC24A1O60721 1099 aa21.91■■□□□ 1.1
SRGAP2C-205ENST00000617209 BRD4O60885 1362 aaPredicted RBP21.9■■□□□ 1.1
SRGAP2C-205ENST00000617209 CABP1Q9NZU7 370 aa21.9■■□□□ 1.1
SRGAP2C-205ENST00000617209 PAK3O75914 559 aaPredicted RBP21.88■■□□□ 1.09
SRGAP2C-205ENST00000617209 CABLES1Q8TDN4 633 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms