RNA–Protein interactions for RNA: ENST00000616691.1

MALAT1-209, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 587 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-209ENST00000616691 SETBP1Q9Y6X0 1596 aa10.16□□□□□ -0.78
MALAT1-209ENST00000616691 RIMS2Q9UQ26 1411 aa10.16□□□□□ -0.78
MALAT1-209ENST00000616691 ACIN1Q9UKV3 1341 aaKnown RBP10.15□□□□□ -0.78
MALAT1-209ENST00000616691 PRAG1Q86YV5 1406 aa10.15□□□□□ -0.79
MALAT1-209ENST00000616691 PIK3R4Q99570 1358 aa10.14□□□□□ -0.79
MALAT1-209ENST00000616691 NEXMIFQ5QGS0 1516 aa10.14□□□□□ -0.79
MALAT1-209ENST00000616691 PCDHB13Q9Y5F0 798 aa10.14□□□□□ -0.79
MALAT1-209ENST00000616691 EID1Q9Y6B2 187 aa10.14□□□□□ -0.79
MALAT1-209ENST00000616691 NCOA3Q9Y6Q9 1424 aa10.14□□□□□ -0.79
MALAT1-209ENST00000616691 TBX22Q9Y458 520 aa10.13□□□□□ -0.79
MALAT1-209ENST00000616691 SETD1AO15047 1707 aaKnown RBP10.13□□□□□ -0.79
MALAT1-209ENST00000616691 KCNA6P17658 529 aa10.12□□□□□ -0.79
MALAT1-209ENST00000616691 XRN1Q8IZH2 1706 aaKnown RBP10.11□□□□□ -0.79
MALAT1-209ENST00000616691 ITGAEP38570 1179 aa10.11□□□□□ -0.79
MALAT1-209ENST00000616691 IFNL1Q8IU54 200 aa10.11□□□□□ -0.79
MALAT1-209ENST00000616691 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.11□□□□□ -0.79
MALAT1-209ENST00000616691 KIF1BO60333 1816 aa10.11□□□□□ -0.79
MALAT1-209ENST00000616691 SPATA31E1Q6ZUB1 1445 aa10.1□□□□□ -0.79
MALAT1-209ENST00000616691 HRCP23327 699 aa10.1□□□□□ -0.79
MALAT1-209ENST00000616691 HDGFP51858 240 aaKnown RBP10.1□□□□□ -0.79
MALAT1-209ENST00000616691 PPLO60437 1756 aa10.09□□□□□ -0.79
MALAT1-209ENST00000616691 IFT172Q9UG01 1749 aa10.09□□□□□ -0.79
MALAT1-209ENST00000616691 SETD5Q9C0A6 1442 aa10.08□□□□□ -0.8
MALAT1-209ENST00000616691 ZNF467Q7Z7K2 595 aaPredicted RBP10.08□□□□□ -0.8
MALAT1-209ENST00000616691 FAM135BQ49AJ0 1406 aa10.07□□□□□ -0.8
MALAT1-209ENST00000616691 PTPRUQ92729 1446 aa10.07□□□□□ -0.8
MALAT1-209ENST00000616691 TRPC6Q9Y210 931 aa10.07□□□□□ -0.8
MALAT1-209ENST00000616691 RPGRIP1LQ68CZ1 1315 aa10.07□□□□□ -0.8
MALAT1-209ENST00000616691 TMEM94Q12767 1356 aa10.06□□□□□ -0.8
MALAT1-209ENST00000616691 UBAP1LF5GYI3 381 aa10.06□□□□□ -0.8
MALAT1-209ENST00000616691 TOM1O60784 492 aa10.06□□□□□ -0.8
MALAT1-209ENST00000616691 ECM2O94769 699 aaPredicted RBP10.06□□□□□ -0.8
MALAT1-209ENST00000616691 PCDHB8Q9UN66 801 aa10.06□□□□□ -0.8
MALAT1-209ENST00000616691 NRXN1Q9ULB1 1477 aa10.05□□□□□ -0.8
MALAT1-209ENST00000616691 POTEIP0CG38 1075 aa10.05□□□□□ -0.8
MALAT1-209ENST00000616691 RNF25Q96BH1 459 aaPredicted RBP10.05□□□□□ -0.8
MALAT1-209ENST00000616691 SLC26A8Q96RN1 970 aa10.05□□□□□ -0.8
MALAT1-209ENST00000616691 TIE1P35590 1138 aa10.04□□□□□ -0.8
MALAT1-209ENST00000616691 DCBLD2Q96PD2 775 aa10.04□□□□□ -0.8
MALAT1-209ENST00000616691 MPHOSPH9Q99550 1183 aa10.04□□□□□ -0.8
MALAT1-209ENST00000616691 DCCP43146 1447 aa10.04□□□□□ -0.8
MALAT1-209ENST00000616691 RAB3GAP2Q9H2M9 1393 aa10.03□□□□□ -0.8
MALAT1-209ENST00000616691 PTCH1Q13635 1447 aa10.03□□□□□ -0.8
MALAT1-209ENST00000616691 METP08581 1390 aa10.02□□□□□ -0.8
MALAT1-209ENST00000616691 AMER1Q5JTC6 1135 aaPredicted RBP10.02□□□□□ -0.81
MALAT1-209ENST00000616691 ASTLQ6HA08 431 aaPredicted RBP10.02□□□□□ -0.81
MALAT1-209ENST00000616691 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.02□□□□□ -0.81
MALAT1-209ENST00000616691 TECPR2O15040 1411 aa10.01□□□□□ -0.81
MALAT1-209ENST00000616691 LAMC1P11047 1609 aa10.01□□□□□ -0.81
MALAT1-209ENST00000616691 BMP2KQ9NSY1 1161 aaPredicted RBP10.01□□□□□ -0.81
MALAT1-209ENST00000616691 ANKRD30BQ9BXX2 1392 aa10.01□□□□□ -0.81
MALAT1-209ENST00000616691 CCDC144AA2RUR9 1427 aa10□□□□□ -0.81
MALAT1-209ENST00000616691 PIK3C2GO75747 1445 aa10□□□□□ -0.81
MALAT1-209ENST00000616691 ROBO1Q9Y6N7 1651 aa10□□□□□ -0.81
MALAT1-209ENST00000616691 MYOM2P54296 1465 aa10□□□□□ -0.81
MALAT1-209ENST00000616691 RIOK3O14730 519 aaKnown RBP10□□□□□ -0.81
MALAT1-209ENST00000616691 ATMINO43313 823 aaPredicted RBP10□□□□□ -0.81
MALAT1-209ENST00000616691 ASXL1Q8IXJ9 1541 aa10□□□□□ -0.81
MALAT1-209ENST00000616691 KNDC1Q76NI1 1749 aa9.99□□□□□ -0.81
MALAT1-209ENST00000616691 TTLL13PA6NNM8 815 aa9.99□□□□□ -0.81
MALAT1-209ENST00000616691 VGFO15240 615 aaPredicted RBP9.99□□□□□ -0.81
MALAT1-209ENST00000616691 HSPA1LP34931 641 aa9.99□□□□□ -0.81
MALAT1-209ENST00000616691 PROSER2Q86WR7 435 aaPredicted RBP9.99□□□□□ -0.81
MALAT1-209ENST00000616691 TRIM52Q96A61 297 aa9.99□□□□□ -0.81
MALAT1-209ENST00000616691 AHDC1Q5TGY3 1603 aaPredicted RBP9.99□□□□□ -0.81
MALAT1-209ENST00000616691 RGL2O15211 777 aa9.98□□□□□ -0.81
MALAT1-209ENST00000616691 PPP1R15AO75807 674 aaPredicted RBP9.98□□□□□ -0.81
MALAT1-209ENST00000616691 AMOTL2Q9Y2J4 779 aa9.98□□□□□ -0.81
MALAT1-209ENST00000616691 MSH6P52701 1360 aa9.98□□□□□ -0.81
MALAT1-209ENST00000616691 ADGRL3Q9HAR2 1447 aa9.98□□□□□ -0.81
MALAT1-209ENST00000616691 COL16A1Q07092 1604 aaPredicted RBP9.97□□□□□ -0.81
MALAT1-209ENST00000616691 NALCNQ8IZF0 1738 aa9.97□□□□□ -0.81
MALAT1-209ENST00000616691 CHGAP10645 457 aaKnown RBP9.97□□□□□ -0.81
MALAT1-209ENST00000616691 PDAP1Q13442 181 aaKnown RBP9.97□□□□□ -0.81
MALAT1-209ENST00000616691 C19orf44Q9H6X5 657 aa9.97□□□□□ -0.81
MALAT1-209ENST00000616691 RTN4Q9NQC3 1192 aaKnown RBP9.97□□□□□ -0.81
MALAT1-209ENST00000616691 MED1Q15648 1581 aaPredicted RBP9.97□□□□□ -0.81
MALAT1-209ENST00000616691 PSEN1P49768 467 aa9.96□□□□□ -0.82
MALAT1-209ENST00000616691 ATN1P54259 1190 aaPredicted RBP9.96□□□□□ -0.82
MALAT1-209ENST00000616691 NUTM2DQ5VT03 806 aaPredicted RBP9.96□□□□□ -0.82
MALAT1-209ENST00000616691 TMEM106CQ9BVX2 250 aa9.96□□□□□ -0.82
MALAT1-209ENST00000616691 MST1RQ04912 1400 aa9.96□□□□□ -0.82
MALAT1-209ENST00000616691 SLAIN2Q9P270 581 aa9.95□□□□□ -0.82
MALAT1-209ENST00000616691 ADGRF5Q8IZF2 1346 aa9.95□□□□□ -0.82
MALAT1-209ENST00000616691 ABCC11Q96J66 1382 aa9.95□□□□□ -0.82
MALAT1-209ENST00000616691 NHSL1Q5SYE7 1610 aa9.95□□□□□ -0.82
MALAT1-209ENST00000616691 ADGRB1O14514 1584 aa9.94□□□□□ -0.82
MALAT1-209ENST00000616691 ROBO2Q9HCK4 1378 aa9.94□□□□□ -0.82
MALAT1-209ENST00000616691 PELP1Q8IZL8 1130 aaKnown RBP9.94□□□□□ -0.82
MALAT1-209ENST00000616691 SIRT1Q96EB6 747 aa9.94□□□□□ -0.82
MALAT1-209ENST00000616691 CDC42BPGQ6DT37 1551 aa9.93□□□□□ -0.82
MALAT1-209ENST00000616691 LRPPRCP42704 1394 aaKnown RBP9.93□□□□□ -0.82
MALAT1-209ENST00000616691 ZNF326Q5BKZ1 582 aaKnown RBP9.93□□□□□ -0.82
MALAT1-209ENST00000616691 CADPS2Q86UW7 1296 aa9.93□□□□□ -0.82
MALAT1-209ENST00000616691 STAC3Q96MF2 364 aa9.93□□□□□ -0.82
MALAT1-209ENST00000616691 PIP4K2BP78356 416 aa9.92□□□□□ -0.82
MALAT1-209ENST00000616691 C14orf93Q9H972 538 aaKnown RBP9.92□□□□□ -0.82
MALAT1-209ENST00000616691 TAOK2Q9UL54 1235 aa9.92□□□□□ -0.82
MALAT1-209ENST00000616691 SHPRHQ149N8 1683 aa9.92□□□□□ -0.82
MALAT1-209ENST00000616691 DLC1Q96QB1 1528 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms