RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 MSS51Q4VC12 460 aa7.72□□□□□ -1.17
HMGB1P24-202ENST00000615653 BRICD5Q6PL45 260 aa7.71□□□□□ -1.18
HMGB1P24-202ENST00000615653 SLC27A5Q9Y2P5 690 aa7.71□□□□□ -1.18
HMGB1P24-202ENST00000615653 VSIG8P0DPA2 414 aa7.7□□□□□ -1.18
HMGB1P24-202ENST00000615653 GDF11O95390 407 aa7.69□□□□□ -1.18
HMGB1P24-202ENST00000615653 ATP6V1AP38606 617 aa7.69□□□□□ -1.18
HMGB1P24-202ENST00000615653 RASSF7Q02833 373 aa7.69□□□□□ -1.18
HMGB1P24-202ENST00000615653 BMP1P13497 986 aa7.68□□□□□ -1.18
HMGB1P24-202ENST00000615653 FUT2Q10981 343 aa7.68□□□□□ -1.18
HMGB1P24-202ENST00000615653 RC3H1Q5TC82 1133 aaKnown RBP7.68□□□□□ -1.18
HMGB1P24-202ENST00000615653 PXYLP1Q8TE99 480 aa7.68□□□□□ -1.18
HMGB1P24-202ENST00000615653 XP32Q5T750 250 aa7.67□□□□□ -1.18
HMGB1P24-202ENST00000615653 FECHP22830 423 aa7.66□□□□□ -1.18
HMGB1P24-202ENST00000615653 OATP04181 439 aa7.65□□□□□ -1.18
HMGB1P24-202ENST00000615653 MMP16P51512 607 aa7.65□□□□□ -1.18
HMGB1P24-202ENST00000615653 SKOR1P84550 965 aa7.65□□□□□ -1.18
HMGB1P24-202ENST00000615653 WDR70Q9NW82 654 aa7.65□□□□□ -1.18
HMGB1P24-202ENST00000615653 CAPN5O15484 640 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P24-202ENST00000615653 ALDH1A1P00352 501 aa7.64□□□□□ -1.19
HMGB1P24-202ENST00000615653 WNT7BP56706 349 aa7.64□□□□□ -1.19
HMGB1P24-202ENST00000615653 RNF19BQ6ZMZ0 732 aa7.63□□□□□ -1.19
HMGB1P24-202ENST00000615653 MLLT3P42568 568 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P24-202ENST00000615653 ZFP42Q96MM3 310 aa7.62□□□□□ -1.19
HMGB1P24-202ENST00000615653 KRTAP4-8Q9BYQ9 185 aa7.62□□□□□ -1.19
HMGB1P24-202ENST00000615653 RNF225M0QZC1 329 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P24-202ENST00000615653 SIAH2O43255 324 aa7.61□□□□□ -1.19
HMGB1P24-202ENST00000615653 DCAF8L2P0C7V8 631 aa7.61□□□□□ -1.19
HMGB1P24-202ENST00000615653 IGHA1P01876 353 aa7.6□□□□□ -1.19
HMGB1P24-202ENST00000615653 GCGRP47871 477 aa7.6□□□□□ -1.19
HMGB1P24-202ENST00000615653 RDH13Q8NBN7 331 aa7.6□□□□□ -1.19
HMGB1P24-202ENST00000615653 METTL3Q86U44 580 aaKnown RBP7.59□□□□□ -1.19
HMGB1P24-202ENST00000615653 DAXXQ9UER7 740 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P24-202ENST00000615653 DXOO77932 396 aaKnown RBP7.58□□□□□ -1.2
HMGB1P24-202ENST00000615653 ADAMTS8Q9UP79 889 aa7.57□□□□□ -1.2
HMGB1P24-202ENST00000615653 DNMT3AQ9Y6K1 912 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P24-202ENST00000615653 NUTM2FA1L443 756 aa7.56□□□□□ -1.2
HMGB1P24-202ENST00000615653 FCHSD2O94868 740 aa7.56□□□□□ -1.2
HMGB1P24-202ENST00000615653 WASF2Q9Y6W5 498 aa7.56□□□□□ -1.2
HMGB1P24-202ENST00000615653 DDX11L8A8MPP1 907 aa7.55□□□□□ -1.2
HMGB1P24-202ENST00000615653 Q3C1V9 767 aa7.55□□□□□ -1.2
HMGB1P24-202ENST00000615653 GPAT2Q6NUI2 795 aa7.55□□□□□ -1.2
HMGB1P24-202ENST00000615653 GRIPAP1Q4V328 841 aa7.53□□□□□ -1.2
HMGB1P24-202ENST00000615653 CCDC24Q8N4L8 307 aa7.53□□□□□ -1.2
HMGB1P24-202ENST00000615653 BBXQ8WY36 941 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P24-202ENST00000615653 USB1Q9BQ65 265 aaKnown RBP7.52□□□□□ -1.21
HMGB1P24-202ENST00000615653 SOBPA7XYQ1 873 aa7.51□□□□□ -1.21
HMGB1P24-202ENST00000615653 FOXK2Q01167 660 aa7.51□□□□□ -1.21
HMGB1P24-202ENST00000615653 SCARF1Q14162 830 aa7.51□□□□□ -1.21
HMGB1P24-202ENST00000615653 MRPL14Q6P1L8 145 aaKnown RBP7.51□□□□□ -1.21
HMGB1P24-202ENST00000615653 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P24-202ENST00000615653 PPFIA3O75145 1194 aa7.5□□□□□ -1.21
HMGB1P24-202ENST00000615653 EHBP1Q8NDI1 1231 aa7.5□□□□□ -1.21
HMGB1P24-202ENST00000615653 AMER1Q5JTC6 1135 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P24-202ENST00000615653 SULF1Q8IWU6 871 aa7.49□□□□□ -1.21
HMGB1P24-202ENST00000615653 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
HMGB1P24-202ENST00000615653 KRT76Q01546 638 aa7.48□□□□□ -1.21
HMGB1P24-202ENST00000615653 ARHGEF1Q92888 912 aaKnown RBP7.48□□□□□ -1.21
HMGB1P24-202ENST00000615653 PURBQ96QR8 312 aaKnown RBP7.48□□□□□ -1.21
HMGB1P24-202ENST00000615653 ADAM23O75077 832 aa7.46□□□□□ -1.22
HMGB1P24-202ENST00000615653 IRS1P35568 1242 aa7.46□□□□□ -1.22
HMGB1P24-202ENST00000615653 HIC1Q14526 733 aa7.46□□□□□ -1.22
HMGB1P24-202ENST00000615653 SPRYD3Q8NCJ5 442 aa7.46□□□□□ -1.22
HMGB1P24-202ENST00000615653 KRTAP9-6A0A140TA67 174 aa7.45□□□□□ -1.22
HMGB1P24-202ENST00000615653 KANK3Q6NY19 840 aa7.45□□□□□ -1.22
HMGB1P24-202ENST00000615653 ZNF385CQ66K41 422 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P24-202ENST00000615653 CNTNAP3BQ96NU0 1288 aa7.44□□□□□ -1.22
HMGB1P24-202ENST00000615653 PSMG3-AS1Q96PY0 264 aa7.44□□□□□ -1.22
HMGB1P24-202ENST00000615653 CNTNAP3Q9BZ76 1288 aa7.44□□□□□ -1.22
HMGB1P24-202ENST00000615653 TIMP2P16035 220 aa7.43□□□□□ -1.22
HMGB1P24-202ENST00000615653 SH3BP2P78314 561 aa7.43□□□□□ -1.22
HMGB1P24-202ENST00000615653 PTCRAQ6ISU1 281 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P24-202ENST00000615653 GPR161Q8N6U8 529 aaKnown RBP7.43□□□□□ -1.22
HMGB1P24-202ENST00000615653 MAN1A2O60476 641 aa7.42□□□□□ -1.22
HMGB1P24-202ENST00000615653 ARHGEF15O94989 841 aa7.42□□□□□ -1.22
HMGB1P24-202ENST00000615653 NNTQ13423 1086 aa7.42□□□□□ -1.22
HMGB1P24-202ENST00000615653 MPNDQ8N594 471 aa7.42□□□□□ -1.22
HMGB1P24-202ENST00000615653 NLRP7Q8WX94 980 aa7.42□□□□□ -1.22
HMGB1P24-202ENST00000615653 ADH1CP00326 375 aa7.41□□□□□ -1.22
HMGB1P24-202ENST00000615653 JUNDP17535 347 aa7.41□□□□□ -1.22
HMGB1P24-202ENST00000615653 KLF16Q9BXK1 252 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P24-202ENST00000615653 PLEKHG3A1L390 1219 aa7.4□□□□□ -1.22
HMGB1P24-202ENST00000615653 WDR4P57081 412 aaKnown RBP7.4□□□□□ -1.22
HMGB1P24-202ENST00000615653 SVOPQ8N4V2 548 aa7.39□□□□□ -1.23
HMGB1P24-202ENST00000615653 TLL2Q9Y6L7 1015 aa7.39□□□□□ -1.23
HMGB1P24-202ENST00000615653 NUDT12Q9BQG2 462 aa7.38□□□□□ -1.23
HMGB1P24-202ENST00000615653 SCARF2Q96GP6 870 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P24-202ENST00000615653 PHOX2BQ99453 314 aa7.37□□□□□ -1.23
HMGB1P24-202ENST00000615653 COL25A1Q9BXS0 654 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P24-202ENST00000615653 MSTNO14793 375 aa7.36□□□□□ -1.23
HMGB1P24-202ENST00000615653 GNPATO15228 680 aa7.36□□□□□ -1.23
HMGB1P24-202ENST00000615653 KDM4AO75164 1064 aa7.36□□□□□ -1.23
HMGB1P24-202ENST00000615653 CD46P15529 392 aa7.36□□□□□ -1.23
HMGB1P24-202ENST00000615653 MARSP56192 900 aaKnown RBP7.36□□□□□ -1.23
HMGB1P24-202ENST00000615653 KRTAP1-3Q8IUG1 177 aa7.36□□□□□ -1.23
HMGB1P24-202ENST00000615653 WHAMMQ8TF30 809 aa7.36□□□□□ -1.23
HMGB1P24-202ENST00000615653 SLURP2P0DP57 97 aa7.35□□□□□ -1.23
HMGB1P24-202ENST00000615653 NANOS1Q8WY41 292 aaKnown RBP7.35□□□□□ -1.23
HMGB1P24-202ENST00000615653 RTN4Q9NQC3 1192 aaKnown RBP7.35□□□□□ -1.23
HMGB1P24-202ENST00000615653 VARSP26640 1264 aaKnown RBP7.34□□□□□ -1.23
HMGB1P24-202ENST00000615653 USP46P62068 366 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms