RNA–Protein interactions for RNA: ENST00000614778.4

PDCD6-212, Transcript of programmed cell death 6, humanhuman

TSL 2 BASIC

Gene PDCD6, Length 1,050 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-212ENST00000614778 SIRT1Q96EB6 747 aa22.79■■□□□ 1.24
PDCD6-212ENST00000614778 NHSL1Q5SYE7 1610 aa22.79■■□□□ 1.24
PDCD6-212ENST00000614778 DDX17Q92841 729 aaKnown RBP22.78■■□□□ 1.24
PDCD6-212ENST00000614778 ORAI2Q96SN7 254 aa22.77■■□□□ 1.24
PDCD6-212ENST00000614778 DLC1Q96QB1 1528 aa22.77■■□□□ 1.24
PDCD6-212ENST00000614778 PRAM1Q96QH2 718 aa22.76■■□□□ 1.23
PDCD6-212ENST00000614778 SAFB2Q14151 953 aaKnown RBP eCLIP22.75■■□□□ 1.233e-8■■□□□ 13.6
PDCD6-212ENST00000614778 ILDR2Q71H61 639 aa22.75■■□□□ 1.23
PDCD6-212ENST00000614778 TRAK1Q9UPV9 953 aa22.75■■□□□ 1.23
PDCD6-212ENST00000614778 NEUROD1Q13562 356 aa22.74■■□□□ 1.23
PDCD6-212ENST00000614778 JCADQ9P266 1359 aa22.74■■□□□ 1.23
PDCD6-212ENST00000614778 NUTM2FA1L443 756 aa22.73■■□□□ 1.23
PDCD6-212ENST00000614778 L3MBTL2Q969R5 705 aa22.73■■□□□ 1.23
PDCD6-212ENST00000614778 FMN2Q9NZ56 1722 aa22.73■■□□□ 1.23
PDCD6-212ENST00000614778 KIAA1210Q9ULL0 1709 aa22.71■■□□□ 1.23
PDCD6-212ENST00000614778 POGKQ9P215 609 aa22.7■■□□□ 1.22
PDCD6-212ENST00000614778 SHPRHQ149N8 1683 aa22.69■■□□□ 1.22
PDCD6-212ENST00000614778 NBPF1Q3BBV0 1214 aa22.69■■□□□ 1.22
PDCD6-212ENST00000614778 ARHGEF28Q8N1W1 1705 aaKnown RBP22.68■■□□□ 1.22
PDCD6-212ENST00000614778 RGPD8O14715 1765 aaPredicted RBP22.68■■□□□ 1.22
PDCD6-212ENST00000614778 ESCO1Q5FWF5 840 aa22.67■■□□□ 1.22
PDCD6-212ENST00000614778 LRP6O75581 1613 aa22.65■■□□□ 1.22
PDCD6-212ENST00000614778 ADGRB2O60241 1585 aa22.65■■□□□ 1.22
PDCD6-212ENST00000614778 PHF23Q9BUL5 403 aaPredicted RBP22.65■■□□□ 1.22
PDCD6-212ENST00000614778 SOS2Q07890 1332 aaPredicted RBP22.64■■□□□ 1.22
PDCD6-212ENST00000614778 HIRIP3Q9BW71 556 aaPredicted RBP22.64■■□□□ 1.21
PDCD6-212ENST00000614778 RGS17Q9UGC6 210 aaPredicted RBP22.64■■□□□ 1.21
PDCD6-212ENST00000614778 MINK1Q8N4C8 1332 aaPredicted RBP22.63■■□□□ 1.21
PDCD6-212ENST00000614778 USP32Q8NFA0 1604 aa22.62■■□□□ 1.21
PDCD6-212ENST00000614778 LRRC59Q96AG4 307 aaKnown RBP22.62■■□□□ 1.21
PDCD6-212ENST00000614778 SPATA31A6Q5VVP1 1343 aa22.61■■□□□ 1.21
PDCD6-212ENST00000614778 FOXO3O43524 673 aa22.61■■□□□ 1.21
PDCD6-212ENST00000614778 PNPLA6Q8IY17 1366 aa22.61■■□□□ 1.21
PDCD6-212ENST00000614778 TRPM1Q7Z4N2 1603 aa22.6■■□□□ 1.21
PDCD6-212ENST00000614778 PXDNQ92626 1479 aa22.6■■□□□ 1.21
PDCD6-212ENST00000614778 XPCQ01831 940 aaPredicted RBP22.59■■□□□ 1.21
PDCD6-212ENST00000614778 NPHP3Q7Z494 1330 aa22.58■■□□□ 1.21
PDCD6-212ENST00000614778 KIF1AQ12756 1690 aa22.58■■□□□ 1.2
PDCD6-212ENST00000614778 NUTM2BA6NNL0 878 aaPredicted RBP22.57■■□□□ 1.2
PDCD6-212ENST00000614778 NUTM2EB1AL46 878 aaPredicted RBP22.57■■□□□ 1.2
PDCD6-212ENST00000614778 NUTM2AQ8IVF1 878 aaPredicted RBP22.57■■□□□ 1.2
PDCD6-212ENST00000614778 PRR36Q9H6K5 1346 aa22.57■■□□□ 1.2
PDCD6-212ENST00000614778 NBPF8Q3BBV2 869 aa22.56■■□□□ 1.2
PDCD6-212ENST00000614778 PCGF6Q9BYE7 350 aa22.56■■□□□ 1.2
PDCD6-212ENST00000614778 WASLO00401 505 aaPredicted RBP22.55■■□□□ 1.2
PDCD6-212ENST00000614778 PHF8Q9UPP1 1060 aa22.55■■□□□ 1.2
PDCD6-212ENST00000614778 ANKARQ7Z5J8 1434 aa22.55■■□□□ 1.2
PDCD6-212ENST00000614778 TULP4Q9NRJ4 1543 aa22.53■■□□□ 1.2
PDCD6-212ENST00000614778 TONSLQ96HA7 1378 aa22.51■■□□□ 1.19
PDCD6-212ENST00000614778 MEX3CQ5U5Q3 659 aaKnown RBP22.51■■□□□ 1.19
PDCD6-212ENST00000614778 POTEAQ6S8J7 498 aa22.51■■□□□ 1.19
PDCD6-212ENST00000614778 PMFBP1Q8TBY8 1022 aa22.51■■□□□ 1.19
PDCD6-212ENST00000614778 COL22A1Q8NFW1 1626 aaPredicted RBP22.5■■□□□ 1.19
PDCD6-212ENST00000614778 KRT28Q7Z3Y7 464 aa22.49■■□□□ 1.19
PDCD6-212ENST00000614778 ROCK2O75116 1388 aaKnown RBP22.49■■□□□ 1.19
PDCD6-212ENST00000614778 QRICH2Q9H0J4 1663 aa22.49■■□□□ 1.19
PDCD6-212ENST00000614778 ATP7BP35670 1465 aa22.48■■□□□ 1.19
PDCD6-212ENST00000614778 CDK19Q9BWU1 502 aa22.48■■□□□ 1.19
PDCD6-212ENST00000614778 CENPJQ9HC77 1338 aaPredicted RBP22.48■■□□□ 1.19
PDCD6-212ENST00000614778 EIF3AQ14152 1382 aaKnown RBP22.48■■□□□ 1.19
PDCD6-212ENST00000614778 SPATA31A3Q5VYP0 1347 aa22.46■■□□□ 1.19
PDCD6-212ENST00000614778 NUDT16Q96DE0 195 aaKnown RBP22.45■■□□□ 1.18
PDCD6-212ENST00000614778 ADAMTS2O95450 1211 aa22.44■■□□□ 1.18
PDCD6-212ENST00000614778 GPRASP1Q5JY77 1395 aa22.44■■□□□ 1.18
PDCD6-212ENST00000614778 ITSN1Q15811 1721 aa22.43■■□□□ 1.18
PDCD6-212ENST00000614778 SOCS7O14512 581 aa22.43■■□□□ 1.18
PDCD6-212ENST00000614778 PSME1Q06323 249 aa22.43■■□□□ 1.18
PDCD6-212ENST00000614778 TRPM3Q9HCF6 1732 aaPredicted RBP22.43■■□□□ 1.18
PDCD6-212ENST00000614778 TOPAZ1Q8N9V7 1692 aa22.42■■□□□ 1.18
PDCD6-212ENST00000614778 TNS3Q68CZ2 1445 aa22.42■■□□□ 1.18
PDCD6-212ENST00000614778 C8orf37Q96NL8 207 aa22.42■■□□□ 1.18
PDCD6-212ENST00000614778 RALGAPBQ86X10 1494 aa22.41■■□□□ 1.18
PDCD6-212ENST00000614778 AFF2P51816 1311 aa22.41■■□□□ 1.18
PDCD6-212ENST00000614778 SBNO1A3KN83 1393 aa22.4■■□□□ 1.18
PDCD6-212ENST00000614778 NGDNQ8NEJ9 315 aaKnown RBP22.38■■□□□ 1.17
PDCD6-212ENST00000614778 CABP2Q9NPB3 220 aa22.38■■□□□ 1.17
PDCD6-212ENST00000614778 MARF1Q9Y4F3 1742 aaKnown RBP22.37■■□□□ 1.17
PDCD6-212ENST00000614778 ZNF772Q68DY9 489 aaPredicted RBP22.37■■□□□ 1.17
PDCD6-212ENST00000614778 CARD11Q9BXL7 1154 aa22.37■■□□□ 1.17
PDCD6-212ENST00000614778 CCDC61Q9Y6R9 512 aa22.37■■□□□ 1.17
PDCD6-212ENST00000614778 ALS2Q96Q42 1657 aa22.36■■□□□ 1.17
PDCD6-212ENST00000614778 SRPK2P78362 688 aaKnown RBP22.36■■□□□ 1.17
PDCD6-212ENST00000614778 CABLES1Q8TDN4 633 aa22.36■■□□□ 1.17
PDCD6-212ENST00000614778 NGLY1Q96IV0 654 aa22.36■■□□□ 1.17
PDCD6-212ENST00000614778 PLEKHG5O94827 1062 aa22.35■■□□□ 1.17
PDCD6-212ENST00000614778 LMOD2Q6P5Q4 547 aa22.35■■□□□ 1.17
PDCD6-212ENST00000614778 ABCA3Q99758 1704 aa22.34■■□□□ 1.17
PDCD6-212ENST00000614778 POLR3AO14802 1390 aaPredicted RBP22.34■■□□□ 1.17
PDCD6-212ENST00000614778 ACEP12821 1306 aa22.33■■□□□ 1.17
PDCD6-212ENST00000614778 PLEKHG3A1L390 1219 aa22.33■■□□□ 1.17
PDCD6-212ENST00000614778 ARHGEF10O15013 1369 aa22.33■■□□□ 1.17
PDCD6-212ENST00000614778 PPIP5K1Q6PFW1 1433 aa22.32■■□□□ 1.16
PDCD6-212ENST00000614778 CLSPNQ9HAW4 1339 aa22.31■■□□□ 1.16
PDCD6-212ENST00000614778 EVC2Q86UK5 1308 aa22.31■■□□□ 1.16
PDCD6-212ENST00000614778 FNBP4Q8N3X1 1017 aaPredicted RBP22.3■■□□□ 1.16
PDCD6-212ENST00000614778 PAK3O75914 559 aaPredicted RBP22.29■■□□□ 1.16
PDCD6-212ENST00000614778 QTRT2Q9H974 415 aaKnown RBP22.28■■□□□ 1.16
PDCD6-212ENST00000614778 USP21Q9UK80 565 aa22.28■■□□□ 1.16
PDCD6-212ENST00000614778 CRYBG1Q9Y4K1 1723 aa22.28■■□□□ 1.16
PDCD6-212ENST00000614778 SBNO2Q9Y2G9 1366 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms