RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 TMEM131LA2VDJ0 1609 aa4.58□□□□□ -1.68
LIG4-205ENST00000614526 MTHFSP49914 203 aa4.58□□□□□ -1.68
LIG4-205ENST00000614526 HDGFP51858 240 aaKnown RBP4.58□□□□□ -1.68
LIG4-205ENST00000614526 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.58□□□□□ -1.68
LIG4-205ENST00000614526 RRP7AQ9Y3A4 280 aaKnown RBP4.58□□□□□ -1.68
LIG4-205ENST00000614526 EID1Q9Y6B2 187 aa4.58□□□□□ -1.68
LIG4-205ENST00000614526 IFT172Q9UG01 1749 aa4.58□□□□□ -1.68
LIG4-205ENST00000614526 APAF1O14727 1248 aa4.58□□□□□ -1.68
LIG4-205ENST00000614526 SOX12O15370 315 aa4.58□□□□□ -1.68
LIG4-205ENST00000614526 PLEKHG5O94827 1062 aa4.58□□□□□ -1.68
LIG4-205ENST00000614526 ZRANB1Q9UGI0 708 aa4.57□□□□□ -1.68
LIG4-205ENST00000614526 NUDCQ9Y266 331 aa4.57□□□□□ -1.68
LIG4-205ENST00000614526 ZC3H13Q5T200 1668 aaKnown RBP4.57□□□□□ -1.68
LIG4-205ENST00000614526 ASXL1Q8IXJ9 1541 aa4.57□□□□□ -1.68
LIG4-205ENST00000614526 CGNL1Q0VF96 1302 aa4.57□□□□□ -1.68
LIG4-205ENST00000614526 NEURL4Q96JN8 1562 aa4.57□□□□□ -1.68
LIG4-205ENST00000614526 LRPPRCP42704 1394 aaKnown RBP4.57□□□□□ -1.68
LIG4-205ENST00000614526 B4GALNT3Q6L9W6 998 aa4.57□□□□□ -1.68
LIG4-205ENST00000614526 ALKQ9UM73 1620 aa4.57□□□□□ -1.68
LIG4-205ENST00000614526 TMEM2Q9UHN6 1383 aa4.57□□□□□ -1.68
LIG4-205ENST00000614526 U2SURPO15042 1029 aaKnown RBP4.57□□□□□ -1.68
LIG4-205ENST00000614526 A0A1W2PP64 1363 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 SBNO2Q9Y2G9 1366 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 PLIN1O60240 522 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 HDGFL2Q7Z4V5 671 aaPredicted RBP4.56□□□□□ -1.68
LIG4-205ENST00000614526 TERF2IPQ9NYB0 399 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 KDM5AP29375 1690 aaKnown RBP4.56□□□□□ -1.68
LIG4-205ENST00000614526 ZFYVE9O95405 1425 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 KIAA1210Q9ULL0 1709 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 PTPRMP28827 1452 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 TULP4Q9NRJ4 1543 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 FYB1O15117 783 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 PMFBP1Q8TBY8 1022 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 AMOTL2Q9Y2J4 779 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 SPATA31D1Q6ZQQ2 1576 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 SETBP1Q9Y6X0 1596 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 QRICH2Q9H0J4 1663 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 REREQ9P2R6 1566 aa4.56□□□□□ -1.68
LIG4-205ENST00000614526 WASLO00401 505 aaPredicted RBP4.56□□□□□ -1.68
LIG4-205ENST00000614526 U2AF1L5P0DN76 240 aaPredicted RBP4.56□□□□□ -1.68
LIG4-205ENST00000614526 U2AF1Q01081 240 aaKnown RBP eCLIP4.56□□□□□ -1.68
LIG4-205ENST00000614526 THEMISQ8N1K5 641 aaPredicted RBP4.56□□□□□ -1.68
LIG4-205ENST00000614526 NUDT16Q96DE0 195 aaKnown RBP4.56□□□□□ -1.68
LIG4-205ENST00000614526 NME9Q86XW9 330 aa4.55□□□□□ -1.68
LIG4-205ENST00000614526 ANKRD36BQ8N2N9 1353 aa4.55□□□□□ -1.68
LIG4-205ENST00000614526 ROBO2Q9HCK4 1378 aa4.55□□□□□ -1.68
LIG4-205ENST00000614526 MYOM1P52179 1685 aa4.55□□□□□ -1.68
LIG4-205ENST00000614526 SPINK5Q9NQ38 1064 aaPredicted RBP4.55□□□□□ -1.68
LIG4-205ENST00000614526 DMRT2Q9Y5R5 561 aa4.55□□□□□ -1.68
LIG4-205ENST00000614526 RCAN3Q9UKA8 241 aa4.54□□□□□ -1.68
LIG4-205ENST00000614526 ABCC11Q96J66 1382 aa4.54□□□□□ -1.68
LIG4-205ENST00000614526 KCNA6P17658 529 aa4.54□□□□□ -1.68
LIG4-205ENST00000614526 ATAD2Q6PL18 1390 aa4.54□□□□□ -1.68
LIG4-205ENST00000614526 ARHGEF28Q8N1W1 1705 aaKnown RBP4.54□□□□□ -1.68
LIG4-205ENST00000614526 RRS1Q15050 365 aaKnown RBP4.54□□□□□ -1.68
LIG4-205ENST00000614526 NUTM2GQ5VZR2 741 aa4.54□□□□□ -1.68
LIG4-205ENST00000614526 CFAP53Q96M91 514 aa4.54□□□□□ -1.68
LIG4-205ENST00000614526 CCDC61Q9Y6R9 512 aa4.54□□□□□ -1.68
LIG4-205ENST00000614526 PRR36Q9H6K5 1346 aa4.54□□□□□ -1.68
LIG4-205ENST00000614526 SMG6Q86US8 1419 aaKnown RBP4.54□□□□□ -1.68
LIG4-205ENST00000614526 EMILIN1Q9Y6C2 1016 aa4.53□□□□□ -1.68
LIG4-205ENST00000614526 GOLGA2Q08379 1002 aa4.53□□□□□ -1.68
LIG4-205ENST00000614526 ADAMTS13Q76LX8 1427 aa4.53□□□□□ -1.68
LIG4-205ENST00000614526 C14orf37Q86TY3 774 aa4.53□□□□□ -1.68
LIG4-205ENST00000614526 TCP11L2Q8N4U5 519 aa4.53□□□□□ -1.68
LIG4-205ENST00000614526 PPIP5K1Q6PFW1 1433 aa4.53□□□□□ -1.68
LIG4-205ENST00000614526 NPC1L1Q9UHC9 1359 aa4.53□□□□□ -1.68
LIG4-205ENST00000614526 HMOX1P09601 288 aa4.53□□□□□ -1.68
LIG4-205ENST00000614526 ANKLE2Q86XL3 938 aa4.52□□□□□ -1.69
LIG4-205ENST00000614526 NGDNQ8NEJ9 315 aaKnown RBP4.52□□□□□ -1.69
LIG4-205ENST00000614526 EXOC6Q8TAG9 804 aa4.52□□□□□ -1.69
LIG4-205ENST00000614526 MYO3AQ8NEV4 1616 aa4.52□□□□□ -1.69
LIG4-205ENST00000614526 PTPRUQ92729 1446 aa4.52□□□□□ -1.69
LIG4-205ENST00000614526 ACEP12821 1306 aa4.52□□□□□ -1.69
LIG4-205ENST00000614526 PAK3O75914 559 aaPredicted RBP4.52□□□□□ -1.69
LIG4-205ENST00000614526 PELP1Q8IZL8 1130 aaKnown RBP4.52□□□□□ -1.69
LIG4-205ENST00000614526 PUS7Q96PZ0 661 aaKnown RBP4.52□□□□□ -1.69
LIG4-205ENST00000614526 PPP4R2Q9NY27 417 aa4.52□□□□□ -1.69
LIG4-205ENST00000614526 C20orf194Q5TEA3 1177 aa4.52□□□□□ -1.69
LIG4-205ENST00000614526 TBX22Q9Y458 520 aa4.52□□□□□ -1.69
LIG4-205ENST00000614526 PLEKHG1Q9ULL1 1385 aa4.52□□□□□ -1.69
LIG4-205ENST00000614526 ZBTB7CA1YPR0 619 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 HSPA2P54652 639 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 RRP1P56182 461 aaKnown RBP4.51□□□□□ -1.69
LIG4-205ENST00000614526 PDE3BQ13370 1112 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 DUSP27Q5VZP5 1158 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 COG3Q96JB2 828 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 CCDC136Q96JN2 1154 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 BCL2L13Q9BXK5 485 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 POLKQ9UBT6 870 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 CD163L1Q9NR16 1453 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 BLMP54132 1417 aaPredicted RBP4.51□□□□□ -1.69
LIG4-205ENST00000614526 DIAPH1O60610 1272 aaKnown RBP4.51□□□□□ -1.69
LIG4-205ENST00000614526 XPCQ01831 940 aaPredicted RBP4.51□□□□□ -1.69
LIG4-205ENST00000614526 WWC1Q8IX03 1113 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 RUNDC1Q96C34 613 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 NLRP1Q9C000 1473 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 POLR3AO14802 1390 aaPredicted RBP4.51□□□□□ -1.69
LIG4-205ENST00000614526 C3P01024 1663 aa4.51□□□□□ -1.69
LIG4-205ENST00000614526 BCAR3O75815 825 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms