RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 SLFN5Q08AF3 891 aa26.02■■□□□ 1.76
SMARCD2-212ENST00000613943 MLECQ14165 292 aa26.02■■□□□ 1.76
SMARCD2-212ENST00000613943 EVC2Q86UK5 1308 aa26.02■■□□□ 1.76
SMARCD2-212ENST00000613943 MYO5BQ9ULV0 1848 aa26.01■■□□□ 1.75
SMARCD2-212ENST00000613943 ARHGEF28Q8N1W1 1705 aaKnown RBP25.99■■□□□ 1.75
SMARCD2-212ENST00000613943 NEUROD2Q15784 382 aa25.99■■□□□ 1.75
SMARCD2-212ENST00000613943 RRP7AQ9Y3A4 280 aaKnown RBP25.98■■□□□ 1.75
SMARCD2-212ENST00000613943 MINK1Q8N4C8 1332 aaPredicted RBP25.97■■□□□ 1.75
SMARCD2-212ENST00000613943 PREX1Q8TCU6 1659 aa25.97■■□□□ 1.75
SMARCD2-212ENST00000613943 MTHFSP49914 203 aa25.97■■□□□ 1.75
SMARCD2-212ENST00000613943 SRPK2P78362 688 aaKnown RBP25.97■■□□□ 1.75
SMARCD2-212ENST00000613943 DIP2BQ9P265 1576 aa25.97■■□□□ 1.75
SMARCD2-212ENST00000613943 POLR3AO14802 1390 aaPredicted RBP25.96■■□□□ 1.75
SMARCD2-212ENST00000613943 STAG3Q9UJ98 1225 aa25.96■■□□□ 1.75
SMARCD2-212ENST00000613943 CGNL1Q0VF96 1302 aa25.96■■□□□ 1.75
SMARCD2-212ENST00000613943 PRAM1Q96QH2 718 aa25.96■■□□□ 1.75
SMARCD2-212ENST00000613943 TMEM131LA2VDJ0 1609 aa25.95■■□□□ 1.74
SMARCD2-212ENST00000613943 MYT1Q01538 1121 aa25.94■■□□□ 1.74
SMARCD2-212ENST00000613943 TRMT2AQ8IZ69 625 aaKnown RBP25.92■■□□□ 1.74
SMARCD2-212ENST00000613943 ANKRD36BQ8N2N9 1353 aa25.92■■□□□ 1.74
SMARCD2-212ENST00000613943 BCAR3O75815 825 aa25.92■■□□□ 1.74
SMARCD2-212ENST00000613943 POGKQ9P215 609 aa25.9■■□□□ 1.74
SMARCD2-212ENST00000613943 ZFYVE9O95405 1425 aa25.9■■□□□ 1.74
SMARCD2-212ENST00000613943 A0A1W2PP64 1363 aa25.89■■□□□ 1.74
SMARCD2-212ENST00000613943 WWC1Q8IX03 1113 aa25.89■■□□□ 1.74
SMARCD2-212ENST00000613943 GGNBP2Q9H3C7 697 aa25.88■■□□□ 1.73
SMARCD2-212ENST00000613943 SHPRHQ149N8 1683 aa25.88■■□□□ 1.73
SMARCD2-212ENST00000613943 ERICH6Q7L0X2 663 aa25.87■■□□□ 1.73
SMARCD2-212ENST00000613943 PTPRMP28827 1452 aa25.87■■□□□ 1.73
SMARCD2-212ENST00000613943 E9PSI1 815 aa25.87■■□□□ 1.73
SMARCD2-212ENST00000613943 NKTRP30414 1462 aaKnown RBP25.86■■□□□ 1.73
SMARCD2-212ENST00000613943 YTHDC2Q9H6S0 1430 aaKnown RBP25.86■■□□□ 1.73
SMARCD2-212ENST00000613943 TCP11L2Q8N4U5 519 aa25.85■■□□□ 1.73
SMARCD2-212ENST00000613943 RUNDC1Q96C34 613 aa25.82■■□□□ 1.72
SMARCD2-212ENST00000613943 WAPLQ7Z5K2 1190 aa25.82■■□□□ 1.72
SMARCD2-212ENST00000613943 PUS7Q96PZ0 661 aaKnown RBP25.82■■□□□ 1.72
SMARCD2-212ENST00000613943 CLTCQ00610 1675 aaKnown RBP25.81■■□□□ 1.72
SMARCD2-212ENST00000613943 TCERG1O14776 1098 aaKnown RBP25.8■■□□□ 1.72
SMARCD2-212ENST00000613943 U2AF1L5P0DN76 240 aaPredicted RBP25.8■■□□□ 1.72
SMARCD2-212ENST00000613943 U2AF1Q01081 240 aaKnown RBP eCLIP25.8■■□□□ 1.72
SMARCD2-212ENST00000613943 NPM2Q86SE8 214 aaKnown RBP25.8■■□□□ 1.72
SMARCD2-212ENST00000613943 CFAP53Q96M91 514 aa25.8■■□□□ 1.72
SMARCD2-212ENST00000613943 USP32Q8NFA0 1604 aa25.8■■□□□ 1.72
SMARCD2-212ENST00000613943 ALKQ9UM73 1620 aa25.79■■□□□ 1.72
SMARCD2-212ENST00000613943 PAK3O75914 559 aaPredicted RBP25.79■■□□□ 1.72
SMARCD2-212ENST00000613943 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.79■■□□□ 1.72
SMARCD2-212ENST00000613943 CDK19Q9BWU1 502 aa25.79■■□□□ 1.72
SMARCD2-212ENST00000613943 PDE4AP27815 886 aa25.78■■□□□ 1.72
SMARCD2-212ENST00000613943 ABCC11Q96J66 1382 aa25.77■■□□□ 1.72
SMARCD2-212ENST00000613943 CABP1Q9NZU7 370 aa25.77■■□□□ 1.72
SMARCD2-212ENST00000613943 FYB1O15117 783 aa25.76■■□□□ 1.71
SMARCD2-212ENST00000613943 KDM2BQ8NHM5 1336 aa25.76■■□□□ 1.71
SMARCD2-212ENST00000613943 IQSEC2Q5JU85 1478 aa25.75■■□□□ 1.71
SMARCD2-212ENST00000613943 ANP32AP39687 249 aaKnown RBP25.75■■□□□ 1.71
SMARCD2-212ENST00000613943 A2ML1A8K2U0 1454 aa25.75■■□□□ 1.71
SMARCD2-212ENST00000613943 CD163L1Q9NR16 1453 aa25.75■■□□□ 1.71
SMARCD2-212ENST00000613943 U2SURPO15042 1029 aaKnown RBP25.74■■□□□ 1.71
SMARCD2-212ENST00000613943 FBLN1P23142 703 aa25.74■■□□□ 1.71
SMARCD2-212ENST00000613943 NSD2O96028 1365 aa25.74■■□□□ 1.71
SMARCD2-212ENST00000613943 ATAD2Q6PL18 1390 aa25.73■■□□□ 1.71
SMARCD2-212ENST00000613943 BCL2L13Q9BXK5 485 aa25.72■■□□□ 1.71
SMARCD2-212ENST00000613943 TERF2IPQ9NYB0 399 aa25.72■■□□□ 1.71
SMARCD2-212ENST00000613943 NOP58Q9Y2X3 529 aaKnown RBP25.72■■□□□ 1.71
SMARCD2-212ENST00000613943 RIMS2Q9UQ26 1411 aa25.72■■□□□ 1.71
SMARCD2-212ENST00000613943 AGLP35573 1532 aa25.72■■□□□ 1.71
SMARCD2-212ENST00000613943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.71■■□□□ 1.71
SMARCD2-212ENST00000613943 NGEFQ8N5V2 710 aa25.71■■□□□ 1.71
SMARCD2-212ENST00000613943 FRAT1Q92837 279 aaPredicted RBP25.71■■□□□ 1.71
SMARCD2-212ENST00000613943 BACH2Q9BYV9 841 aa25.71■■□□□ 1.71
SMARCD2-212ENST00000613943 PANK1Q8TE04 598 aa25.7■■□□□ 1.71
SMARCD2-212ENST00000613943 CANXP27824 592 aaKnown RBP25.69■■□□□ 1.7
SMARCD2-212ENST00000613943 PHF23Q9BUL5 403 aaPredicted RBP25.69■■□□□ 1.7
SMARCD2-212ENST00000613943 NINLQ9Y2I6 1382 aa25.68■■□□□ 1.7
SMARCD2-212ENST00000613943 ARHGEF40Q8TER5 1519 aa25.68■■□□□ 1.7
SMARCD2-212ENST00000613943 IPO9Q96P70 1041 aaKnown RBP25.68■■□□□ 1.7
SMARCD2-212ENST00000613943 TNNQ9UQP3 1299 aa25.68■■□□□ 1.7
SMARCD2-212ENST00000613943 REREQ9P2R6 1566 aa25.68■■□□□ 1.7
SMARCD2-212ENST00000613943 CENPQQ7L2Z9 268 aaPredicted RBP25.67■■□□□ 1.7
SMARCD2-212ENST00000613943 COG6Q9Y2V7 657 aa25.67■■□□□ 1.7
SMARCD2-212ENST00000613943 SPATA31D1Q6ZQQ2 1576 aa25.67■■□□□ 1.7
SMARCD2-212ENST00000613943 HDGFL2Q7Z4V5 671 aaPredicted RBP25.66■■□□□ 1.7
SMARCD2-212ENST00000613943 PPP6R1Q9UPN7 881 aa25.66■■□□□ 1.7
SMARCD2-212ENST00000613943 NLRP1Q9C000 1473 aa25.66■■□□□ 1.7
SMARCD2-212ENST00000613943 MS4A1P11836 297 aa25.66■■□□□ 1.7
SMARCD2-212ENST00000613943 ESF1Q9H501 851 aaKnown RBP25.66■■□□□ 1.7
SMARCD2-212ENST00000613943 ZMYM3Q14202 1370 aa25.64■■□□□ 1.7
SMARCD2-212ENST00000613943 PPM1GO15355 546 aaPredicted RBP25.64■■□□□ 1.7
SMARCD2-212ENST00000613943 TXNDC2Q86VQ3 553 aa25.64■■□□□ 1.7
SMARCD2-212ENST00000613943 METP08581 1390 aa25.64■■□□□ 1.69
SMARCD2-212ENST00000613943 RARSP54136 660 aaKnown RBP25.64■■□□□ 1.69
SMARCD2-212ENST00000613943 NCKAP5LQ9HCH0 1330 aa25.64■■□□□ 1.69
SMARCD2-212ENST00000613943 TSR2Q969E8 191 aaKnown RBP25.63■■□□□ 1.69
SMARCD2-212ENST00000613943 RGS3P49796 1198 aa25.63■■□□□ 1.69
SMARCD2-212ENST00000613943 WDR63Q8IWG1 891 aa25.63■■□□□ 1.69
SMARCD2-212ENST00000613943 PLEKHF1Q96S99 279 aa25.61■■□□□ 1.69
SMARCD2-212ENST00000613943 IGHDP01880 384 aa25.6■■□□□ 1.69
SMARCD2-212ENST00000613943 COL3A1P02461 1466 aaPredicted RBP25.6■■□□□ 1.69
SMARCD2-212ENST00000613943 CCDC27Q2M243 656 aa25.6■■□□□ 1.69
SMARCD2-212ENST00000613943 RLBP1P12271 317 aa25.59■■□□□ 1.69
SMARCD2-212ENST00000613943 CLUAP1Q96AJ1 413 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms