RNA–Protein interactions for RNA: ENST00000613315.4

UBAP2L-220, Transcript of ubiquitin associated protein 2 like, humanhuman

TSL 2 BASIC

Gene UBAP2L, Length 3,451 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2L-220ENST00000613315 PTMSP20962 102 aa11.28□□□□□ -0.6
UBAP2L-220ENST00000613315 CANXP27824 592 aaKnown RBP11.28□□□□□ -0.6
UBAP2L-220ENST00000613315 CALD1Q05682 793 aaKnown RBP11.28□□□□□ -0.6
UBAP2L-220ENST00000613315 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
UBAP2L-220ENST00000613315 CHMP7Q8WUX9 453 aaPredicted RBP11.27□□□□□ -0.61
UBAP2L-220ENST00000613315 SCAF11Q99590 1463 aaKnown RBP11.27□□□□□ -0.61
UBAP2L-220ENST00000613315 SKOR2Q2VWA4 1001 aaPredicted RBP11.27□□□□□ -0.61
UBAP2L-220ENST00000613315 SNX21Q969T3 373 aa11.27□□□□□ -0.61
UBAP2L-220ENST00000613315 PPP1R9BQ96SB3 815 aa11.27□□□□□ -0.61
UBAP2L-220ENST00000613315 PHF23Q9BUL5 403 aaPredicted RBP11.26□□□□□ -0.61
UBAP2L-220ENST00000613315 KDM5AP29375 1690 aaKnown RBP11.26□□□□□ -0.61
UBAP2L-220ENST00000613315 POLR3AO14802 1390 aaPredicted RBP11.26□□□□□ -0.61
UBAP2L-220ENST00000613315 KANK1Q14678 1352 aa11.26□□□□□ -0.61
UBAP2L-220ENST00000613315 GAS2L3Q86XJ1 694 aa11.26□□□□□ -0.61
UBAP2L-220ENST00000613315 DUOX2Q9NRD8 1548 aa11.26□□□□□ -0.61
UBAP2L-220ENST00000613315 SMC5Q8IY18 1101 aa11.26□□□□□ -0.61
UBAP2L-220ENST00000613315 PREX2Q70Z35 1606 aa11.26□□□□□ -0.61
UBAP2L-220ENST00000613315 IQSEC2Q5JU85 1478 aa11.26□□□□□ -0.61
UBAP2L-220ENST00000613315 CEP152O94986 1710 aa11.25□□□□□ -0.61
UBAP2L-220ENST00000613315 PLEKHD1A6NEE1 506 aa11.25□□□□□ -0.61
UBAP2L-220ENST00000613315 RLBP1P12271 317 aa11.25□□□□□ -0.61
UBAP2L-220ENST00000613315 HSCBQ8IWL3 235 aa11.25□□□□□ -0.61
UBAP2L-220ENST00000613315 IBTKQ9P2D0 1353 aaPredicted RBP11.25□□□□□ -0.61
UBAP2L-220ENST00000613315 SHPRHQ149N8 1683 aa11.25□□□□□ -0.61
UBAP2L-220ENST00000613315 ATP10BO94823 1461 aa11.25□□□□□ -0.61
UBAP2L-220ENST00000613315 CCDC173Q0VFZ6 552 aa11.25□□□□□ -0.61
UBAP2L-220ENST00000613315 SPHKAPQ2M3C7 1700 aa11.25□□□□□ -0.61
UBAP2L-220ENST00000613315 CDC42BPBQ9Y5S2 1711 aa11.25□□□□□ -0.61
UBAP2L-220ENST00000613315 TTC37Q6PGP7 1564 aa11.25□□□□□ -0.61
UBAP2L-220ENST00000613315 OFD1O75665 1012 aa11.24□□□□□ -0.61
UBAP2L-220ENST00000613315 RBM25P49756 843 aaKnown RBP11.24□□□□□ -0.61
UBAP2L-220ENST00000613315 FOXD4L1Q9NU39 408 aa11.24□□□□□ -0.61
UBAP2L-220ENST00000613315 KIAA1211Q6ZU35 1233 aa11.24□□□□□ -0.61
UBAP2L-220ENST00000613315 RAB3GAP1Q15042 981 aa11.23□□□□□ -0.61
UBAP2L-220ENST00000613315 STAC3Q96MF2 364 aa11.23□□□□□ -0.61
UBAP2L-220ENST00000613315 ARHGAP31Q2M1Z3 1444 aa11.23□□□□□ -0.61
UBAP2L-220ENST00000613315 ZSCAN30Q86W11 494 aa11.23□□□□□ -0.61
UBAP2L-220ENST00000613315 TNPO1Q92973 898 aaKnown RBP11.23□□□□□ -0.61
UBAP2L-220ENST00000613315 GBP4Q96PP9 640 aa11.23□□□□□ -0.61
UBAP2L-220ENST00000613315 KIAA1210Q9ULL0 1709 aa11.23□□□□□ -0.61
UBAP2L-220ENST00000613315 NCBP3Q53F19 620 aaKnown RBP11.23□□□□□ -0.61
UBAP2L-220ENST00000613315 CARMIL2Q6F5E8 1435 aa11.22□□□□□ -0.61
UBAP2L-220ENST00000613315 WDR63Q8IWG1 891 aa11.22□□□□□ -0.61
UBAP2L-220ENST00000613315 MAP7D2Q96T17 732 aa11.22□□□□□ -0.61
UBAP2L-220ENST00000613315 CLEC17AQ6ZS10 378 aa11.22□□□□□ -0.61
UBAP2L-220ENST00000613315 PRDM4Q9UKN5 801 aa11.22□□□□□ -0.61
UBAP2L-220ENST00000613315 MFAP1P55081 439 aaKnown RBP11.22□□□□□ -0.61
UBAP2L-220ENST00000613315 HDAC1Q13547 482 aaPredicted RBP11.22□□□□□ -0.61
UBAP2L-220ENST00000613315 ARID3AQ99856 593 aa11.22□□□□□ -0.61
UBAP2L-220ENST00000613315 MVPQ14764 893 aaKnown RBP11.21□□□□□ -0.61
UBAP2L-220ENST00000613315 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.21□□□□□ -0.61
UBAP2L-220ENST00000613315 CCDC27Q2M243 656 aa11.21□□□□□ -0.62
UBAP2L-220ENST00000613315 HS1BP3Q53T59 392 aa11.21□□□□□ -0.62
UBAP2L-220ENST00000613315 ZBTB7CA1YPR0 619 aa11.21□□□□□ -0.62
UBAP2L-220ENST00000613315 RIPK4P57078 832 aa11.2□□□□□ -0.62
UBAP2L-220ENST00000613315 SYCP2Q9BX26 1530 aa11.18□□□□□ -0.62
UBAP2L-220ENST00000613315 RUNDC1Q96C34 613 aa11.18□□□□□ -0.62
UBAP2L-220ENST00000613315 ERVK-7P63135 1459 aa11.18□□□□□ -0.62
UBAP2L-220ENST00000613315 NASPP49321 788 aaPredicted RBP11.18□□□□□ -0.62
UBAP2L-220ENST00000613315 JPH4Q96JJ6 628 aa11.18□□□□□ -0.62
UBAP2L-220ENST00000613315 TRPM2O94759 1503 aa11.18□□□□□ -0.62
UBAP2L-220ENST00000613315 CT47B1P0C2W7 299 aaPredicted RBP11.17□□□□□ -0.62
UBAP2L-220ENST00000613315 NEURL4Q96JN8 1562 aa11.17□□□□□ -0.62
UBAP2L-220ENST00000613315 ZNF500O60304 480 aaPredicted RBP11.17□□□□□ -0.62
UBAP2L-220ENST00000613315 KLHL40Q2TBA0 621 aa11.17□□□□□ -0.62
UBAP2L-220ENST00000613315 CARD14Q9BXL6 1004 aa11.17□□□□□ -0.62
UBAP2L-220ENST00000613315 ZKSCAN2Q63HK3 967 aa11.16□□□□□ -0.62
UBAP2L-220ENST00000613315 MSNP26038 577 aaKnown RBP11.16□□□□□ -0.62
UBAP2L-220ENST00000613315 NUTM2DQ5VT03 806 aaPredicted RBP11.16□□□□□ -0.62
UBAP2L-220ENST00000613315 ADGRL1O94910 1474 aa11.15□□□□□ -0.62
UBAP2L-220ENST00000613315 ZNF445P59923 1031 aa11.15□□□□□ -0.62
UBAP2L-220ENST00000613315 MTERF4Q7Z6M4 381 aaKnown RBP11.15□□□□□ -0.62
UBAP2L-220ENST00000613315 DZIP1LQ8IYY4 767 aaKnown RBP11.15□□□□□ -0.62
UBAP2L-220ENST00000613315 TCP11L2Q8N4U5 519 aa11.15□□□□□ -0.62
UBAP2L-220ENST00000613315 MYO3AQ8NEV4 1616 aa11.15□□□□□ -0.62
UBAP2L-220ENST00000613315 ANP32BQ92688 251 aaKnown RBP11.15□□□□□ -0.62
UBAP2L-220ENST00000613315 KIF2CQ99661 725 aa11.15□□□□□ -0.62
UBAP2L-220ENST00000613315 NOL7Q9UMY1 257 aaKnown RBP11.15□□□□□ -0.62
UBAP2L-220ENST00000613315 ADGRB2O60241 1585 aa11.15□□□□□ -0.62
UBAP2L-220ENST00000613315 PDLIM2Q96JY6 352 aa11.15□□□□□ -0.63
UBAP2L-220ENST00000613315 PTPRTO14522 1441 aa11.14□□□□□ -0.63
UBAP2L-220ENST00000613315 HSP90AB1P08238 724 aaKnown RBP11.14□□□□□ -0.63
UBAP2L-220ENST00000613315 USP32Q8NFA0 1604 aa11.14□□□□□ -0.63
UBAP2L-220ENST00000613315 SMAP1Q8IYB5 467 aaPredicted RBP11.14□□□□□ -0.63
UBAP2L-220ENST00000613315 SBNO2Q9Y2G9 1366 aa11.14□□□□□ -0.63
UBAP2L-220ENST00000613315 CFAP74Q9C0B2 1584 aa11.14□□□□□ -0.63
UBAP2L-220ENST00000613315 ERCC6L2Q5T890 1561 aa11.13□□□□□ -0.63
UBAP2L-220ENST00000613315 PODXL2Q9NZ53 605 aa11.13□□□□□ -0.63
UBAP2L-220ENST00000613315 DDX19BQ9UMR2 479 aa11.13□□□□□ -0.63
UBAP2L-220ENST00000613315 GOLGA6L22H0YM25 854 aa11.13□□□□□ -0.63
UBAP2L-220ENST00000613315 SAFB2Q14151 953 aaKnown RBP eCLIP11.13□□□□□ -0.63
UBAP2L-220ENST00000613315 ZNF518AQ6AHZ1 1483 aa11.13□□□□□ -0.63
UBAP2L-220ENST00000613315 K7ELQ4 463 aaPredicted RBP11.12□□□□□ -0.63
UBAP2L-220ENST00000613315 FTSJ3Q8IY81 847 aaKnown RBP11.12□□□□□ -0.63
UBAP2L-220ENST00000613315 KIF16BQ96L93 1317 aa11.12□□□□□ -0.63
UBAP2L-220ENST00000613315 NUCB1Q02818 461 aa11.12□□□□□ -0.63
UBAP2L-220ENST00000613315 CLTCL1P53675 1640 aa11.12□□□□□ -0.63
UBAP2L-220ENST00000613315 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
UBAP2L-220ENST00000613315 MCM5P33992 734 aa11.12□□□□□ -0.63
UBAP2L-220ENST00000613315 BMP2KLQ5H9B9 411 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms