RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 ARHGEF28Q8N1W1 1705 aaKnown RBP26.14■■□□□ 1.78
SEMA3B-211ENST00000612509 NEUROD1Q13562 356 aa26.14■■□□□ 1.78
SEMA3B-211ENST00000612509 SIRT1Q96EB6 747 aa26.14■■□□□ 1.78
SEMA3B-211ENST00000612509 BRINP3Q76B58 766 aa26.13■■□□□ 1.77
SEMA3B-211ENST00000612509 L3MBTL2Q969R5 705 aa26.13■■□□□ 1.77
SEMA3B-211ENST00000612509 FMN2Q9NZ56 1722 aa26.12■■□□□ 1.77
SEMA3B-211ENST00000612509 MED1Q15648 1581 aaPredicted RBP26.12■■□□□ 1.77
SEMA3B-211ENST00000612509 ADGRB2O60241 1585 aa26.11■■□□□ 1.77
SEMA3B-211ENST00000612509 PRAM1Q96QH2 718 aa26.09■■□□□ 1.77
SEMA3B-211ENST00000612509 PCGF6Q9BYE7 350 aa26.09■■□□□ 1.77
SEMA3B-211ENST00000612509 TRPM1Q7Z4N2 1603 aa26.08■■□□□ 1.77
SEMA3B-211ENST00000612509 TRAK1Q9UPV9 953 aa26.08■■□□□ 1.77
SEMA3B-211ENST00000612509 SAFB2Q14151 953 aaKnown RBP eCLIP26.04■■□□□ 1.76
SEMA3B-211ENST00000612509 POGKQ9P215 609 aa26.04■■□□□ 1.76
SEMA3B-211ENST00000612509 TONSLQ96HA7 1378 aa26.03■■□□□ 1.76
SEMA3B-211ENST00000612509 DISP3Q9P2K9 1392 aa26.02■■□□□ 1.76
SEMA3B-211ENST00000612509 SHPRHQ149N8 1683 aa26.01■■□□□ 1.75
SEMA3B-211ENST00000612509 NBPF1Q3BBV0 1214 aa26.01■■□□□ 1.75
SEMA3B-211ENST00000612509 JCADQ9P266 1359 aa26.01■■□□□ 1.75
SEMA3B-211ENST00000612509 KIF1AQ12756 1690 aa25.99■■□□□ 1.75
SEMA3B-211ENST00000612509 ORAI2Q96SN7 254 aa25.99■■□□□ 1.75
SEMA3B-211ENST00000612509 USP32Q8NFA0 1604 aa25.97■■□□□ 1.75
SEMA3B-211ENST00000612509 RGPD8O14715 1765 aaPredicted RBP25.97■■□□□ 1.75
SEMA3B-211ENST00000612509 NUTM2FA1L443 756 aa25.96■■□□□ 1.75
SEMA3B-211ENST00000612509 DDX17Q92841 729 aaKnown RBP25.96■■□□□ 1.75
SEMA3B-211ENST00000612509 TULP4Q9NRJ4 1543 aa25.94■■□□□ 1.74
SEMA3B-211ENST00000612509 MINK1Q8N4C8 1332 aaPredicted RBP25.94■■□□□ 1.74
SEMA3B-211ENST00000612509 ESCO1Q5FWF5 840 aa25.94■■□□□ 1.74
SEMA3B-211ENST00000612509 ANKARQ7Z5J8 1434 aa25.94■■□□□ 1.74
SEMA3B-211ENST00000612509 HIRIP3Q9BW71 556 aaPredicted RBP25.93■■□□□ 1.74
SEMA3B-211ENST00000612509 ROCK2O75116 1388 aaKnown RBP25.93■■□□□ 1.74
SEMA3B-211ENST00000612509 QRICH2Q9H0J4 1663 aa25.92■■□□□ 1.74
SEMA3B-211ENST00000612509 EIF3AQ14152 1382 aaKnown RBP25.92■■□□□ 1.74
SEMA3B-211ENST00000612509 NBPF8Q3BBV2 869 aa25.91■■□□□ 1.74
SEMA3B-211ENST00000612509 RALGAPBQ86X10 1494 aa25.91■■□□□ 1.74
SEMA3B-211ENST00000612509 PXDNQ92626 1479 aa25.91■■□□□ 1.74
SEMA3B-211ENST00000612509 SOS2Q07890 1332 aaPredicted RBP25.89■■□□□ 1.74
SEMA3B-211ENST00000612509 NPHP3Q7Z494 1330 aa25.89■■□□□ 1.74
SEMA3B-211ENST00000612509 GPRASP1Q5JY77 1395 aa25.89■■□□□ 1.74
SEMA3B-211ENST00000612509 LRP6O75581 1613 aa25.88■■□□□ 1.73
SEMA3B-211ENST00000612509 SPATA31A6Q5VVP1 1343 aa25.88■■□□□ 1.73
SEMA3B-211ENST00000612509 CLSPNQ9HAW4 1339 aa25.88■■□□□ 1.73
SEMA3B-211ENST00000612509 ITSN1Q15811 1721 aa25.87■■□□□ 1.73
SEMA3B-211ENST00000612509 PNPLA6Q8IY17 1366 aa25.86■■□□□ 1.73
SEMA3B-211ENST00000612509 WASLO00401 505 aaPredicted RBP25.86■■□□□ 1.73
SEMA3B-211ENST00000612509 LRRC59Q96AG4 307 aaKnown RBP25.86■■□□□ 1.73
SEMA3B-211ENST00000612509 CENPJQ9HC77 1338 aaPredicted RBP25.86■■□□□ 1.73
SEMA3B-211ENST00000612509 ATP7BP35670 1465 aa25.85■■□□□ 1.73
SEMA3B-211ENST00000612509 PRR36Q9H6K5 1346 aa25.84■■□□□ 1.73
SEMA3B-211ENST00000612509 TOPAZ1Q8N9V7 1692 aa25.83■■□□□ 1.73
SEMA3B-211ENST00000612509 FOXO3O43524 673 aa25.83■■□□□ 1.73
SEMA3B-211ENST00000612509 ILDR2Q71H61 639 aa25.83■■□□□ 1.73
SEMA3B-211ENST00000612509 PHF23Q9BUL5 403 aaPredicted RBP25.83■■□□□ 1.73
SEMA3B-211ENST00000612509 PHF8Q9UPP1 1060 aa25.83■■□□□ 1.73
SEMA3B-211ENST00000612509 COL22A1Q8NFW1 1626 aaPredicted RBP25.83■■□□□ 1.73
SEMA3B-211ENST00000612509 XPCQ01831 940 aaPredicted RBP25.8■■□□□ 1.72
SEMA3B-211ENST00000612509 CDK19Q9BWU1 502 aa25.76■■□□□ 1.71
SEMA3B-211ENST00000612509 TRPM3Q9HCF6 1732 aaPredicted RBP25.75■■□□□ 1.71
SEMA3B-211ENST00000612509 PMFBP1Q8TBY8 1022 aa25.75■■□□□ 1.71
SEMA3B-211ENST00000612509 CARD11Q9BXL7 1154 aa25.75■■□□□ 1.71
SEMA3B-211ENST00000612509 TNS3Q68CZ2 1445 aa25.74■■□□□ 1.71
SEMA3B-211ENST00000612509 CCER1Q8TC90 406 aaPredicted RBP25.74■■□□□ 1.71
SEMA3B-211ENST00000612509 NUTM2BA6NNL0 878 aaPredicted RBP25.73■■□□□ 1.71
SEMA3B-211ENST00000612509 NUTM2EB1AL46 878 aaPredicted RBP25.73■■□□□ 1.71
SEMA3B-211ENST00000612509 NUTM2AQ8IVF1 878 aaPredicted RBP25.73■■□□□ 1.71
SEMA3B-211ENST00000612509 NUDT16Q96DE0 195 aaKnown RBP25.73■■□□□ 1.71
SEMA3B-211ENST00000612509 MEX3CQ5U5Q3 659 aaKnown RBP25.72■■□□□ 1.71
SEMA3B-211ENST00000612509 KRT28Q7Z3Y7 464 aa25.72■■□□□ 1.71
SEMA3B-211ENST00000612509 SBNO1A3KN83 1393 aa25.71■■□□□ 1.71
SEMA3B-211ENST00000612509 SPATA31A3Q5VYP0 1347 aa25.7■■□□□ 1.71
SEMA3B-211ENST00000612509 RGS17Q9UGC6 210 aaPredicted RBP25.7■■□□□ 1.7
SEMA3B-211ENST00000612509 TIMELESSQ9UNS1 1208 aa25.7■■□□□ 1.7
SEMA3B-211ENST00000612509 SBNO2Q9Y2G9 1366 aa25.69■■□□□ 1.7
SEMA3B-211ENST00000612509 SRPK2P78362 688 aaKnown RBP25.69■■□□□ 1.7
SEMA3B-211ENST00000612509 ALS2Q96Q42 1657 aa25.68■■□□□ 1.7
SEMA3B-211ENST00000612509 PSME1Q06323 249 aa25.68■■□□□ 1.7
SEMA3B-211ENST00000612509 ABCA3Q99758 1704 aa25.67■■□□□ 1.7
SEMA3B-211ENST00000612509 EVC2Q86UK5 1308 aa25.66■■□□□ 1.7
SEMA3B-211ENST00000612509 CABP2Q9NPB3 220 aa25.66■■□□□ 1.7
SEMA3B-211ENST00000612509 CCDC61Q9Y6R9 512 aa25.66■■□□□ 1.7
SEMA3B-211ENST00000612509 MARF1Q9Y4F3 1742 aaKnown RBP25.66■■□□□ 1.7
SEMA3B-211ENST00000612509 PPIP5K1Q6PFW1 1433 aa25.65■■□□□ 1.7
SEMA3B-211ENST00000612509 NGDNQ8NEJ9 315 aaKnown RBP25.65■■□□□ 1.7
SEMA3B-211ENST00000612509 POLR3AO14802 1390 aaPredicted RBP25.65■■□□□ 1.7
SEMA3B-211ENST00000612509 ARHGEF10O15013 1369 aa25.64■■□□□ 1.69
SEMA3B-211ENST00000612509 SOCS7O14512 581 aa25.62■■□□□ 1.69
SEMA3B-211ENST00000612509 PLEKHG3A1L390 1219 aa25.61■■□□□ 1.69
SEMA3B-211ENST00000612509 ADAMTS2O95450 1211 aa25.6■■□□□ 1.69
SEMA3B-211ENST00000612509 C8orf37Q96NL8 207 aa25.6■■□□□ 1.69
SEMA3B-211ENST00000612509 ACEP12821 1306 aa25.6■■□□□ 1.69
SEMA3B-211ENST00000612509 CRYBG1Q9Y4K1 1723 aa25.59■■□□□ 1.69
SEMA3B-211ENST00000612509 POTEAQ6S8J7 498 aa25.58■■□□□ 1.69
SEMA3B-211ENST00000612509 AFF2P51816 1311 aa25.58■■□□□ 1.69
SEMA3B-211ENST00000612509 ATAD2Q6PL18 1390 aa25.57■■□□□ 1.68
SEMA3B-211ENST00000612509 USP47Q96K76 1375 aa25.57■■□□□ 1.68
SEMA3B-211ENST00000612509 LMOD2Q6P5Q4 547 aa25.57■■□□□ 1.68
SEMA3B-211ENST00000612509 ZNF772Q68DY9 489 aaPredicted RBP25.56■■□□□ 1.68
SEMA3B-211ENST00000612509 AKAP12Q02952 1782 aa25.54■■□□□ 1.68
SEMA3B-211ENST00000612509 PHRF1Q9P1Y6 1649 aaKnown RBP25.52■■□□□ 1.68
SEMA3B-211ENST00000612509 ST20-MTHFSA0A0A6YYL1 179 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms