RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 SALL2Q9Y467 1007 aaPredicted RBP25.05■■□□□ 1.6
SEMA3B-210ENST00000611067 MYO3AQ8NEV4 1616 aa25.05■■□□□ 1.6
SEMA3B-210ENST00000611067 TNRQ92752 1358 aa25.04■■□□□ 1.6
SEMA3B-210ENST00000611067 TMEM132EQ6IEE7 984 aa25.03■■□□□ 1.6
SEMA3B-210ENST00000611067 TRAK1Q9UPV9 953 aa25.02■■□□□ 1.6
SEMA3B-210ENST00000611067 FER1L4A9Z1Z3 1794 aa25.01■■□□□ 1.59
SEMA3B-210ENST00000611067 CENPJQ9HC77 1338 aaPredicted RBP25.01■■□□□ 1.59
SEMA3B-210ENST00000611067 CDCA7LQ96GN5 454 aa25.01■■□□□ 1.59
SEMA3B-210ENST00000611067 SBNO2Q9Y2G9 1366 aa24.99■■□□□ 1.59
SEMA3B-210ENST00000611067 RIMS2Q9UQ26 1411 aa24.99■■□□□ 1.59
SEMA3B-210ENST00000611067 BLMP54132 1417 aaPredicted RBP24.98■■□□□ 1.59
SEMA3B-210ENST00000611067 KDM5AP29375 1690 aaKnown RBP24.98■■□□□ 1.59
SEMA3B-210ENST00000611067 PER1O15534 1290 aaPredicted RBP24.98■■□□□ 1.59
SEMA3B-210ENST00000611067 CRBNQ96SW2 442 aa24.96■■□□□ 1.59
SEMA3B-210ENST00000611067 SENP3Q9H4L4 574 aaPredicted RBP24.96■■□□□ 1.59
SEMA3B-210ENST00000611067 QRICH2Q9H0J4 1663 aa24.96■■□□□ 1.59
SEMA3B-210ENST00000611067 PLIN1O60240 522 aa24.95■■□□□ 1.58
SEMA3B-210ENST00000611067 C3P01024 1663 aa24.94■■□□□ 1.58
SEMA3B-210ENST00000611067 ARHGEF28Q8N1W1 1705 aaKnown RBP24.94■■□□□ 1.58
SEMA3B-210ENST00000611067 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.93■■□□□ 1.58
SEMA3B-210ENST00000611067 PANK3Q9H999 370 aa24.93■■□□□ 1.58
SEMA3B-210ENST00000611067 RTN4Q9NQC3 1192 aaKnown RBP24.93■■□□□ 1.58
SEMA3B-210ENST00000611067 ASXL1Q8IXJ9 1541 aa24.93■■□□□ 1.58
SEMA3B-210ENST00000611067 ALKQ9UM73 1620 aa24.92■■□□□ 1.58
SEMA3B-210ENST00000611067 CEBPAP49715 358 aaPredicted RBP24.92■■□□□ 1.58
SEMA3B-210ENST00000611067 NLRP1Q9C000 1473 aa24.92■■□□□ 1.58
SEMA3B-210ENST00000611067 HDGFP51858 240 aaKnown RBP24.91■■□□□ 1.58
SEMA3B-210ENST00000611067 UBR1Q8IWV7 1749 aa24.91■■□□□ 1.58
SEMA3B-210ENST00000611067 MYOM1P52179 1685 aa24.89■■□□□ 1.58
SEMA3B-210ENST00000611067 GSE1Q14687 1217 aa24.89■■□□□ 1.57
SEMA3B-210ENST00000611067 KDM2BQ8NHM5 1336 aa24.88■■□□□ 1.57
SEMA3B-210ENST00000611067 STK26Q9P289 416 aa24.87■■□□□ 1.57
SEMA3B-210ENST00000611067 NFKBIBQ15653 356 aa24.87■■□□□ 1.57
SEMA3B-210ENST00000611067 PLPPR3Q6T4P5 718 aa24.87■■□□□ 1.57
SEMA3B-210ENST00000611067 SKAP1Q86WV1 359 aa24.87■■□□□ 1.57
SEMA3B-210ENST00000611067 YTHDC2Q9H6S0 1430 aaKnown RBP24.87■■□□□ 1.57
SEMA3B-210ENST00000611067 TMEM2Q9UHN6 1383 aa24.85■■□□□ 1.57
SEMA3B-210ENST00000611067 CENPQQ7L2Z9 268 aaPredicted RBP24.83■■□□□ 1.57
SEMA3B-210ENST00000611067 KNSTRNQ9Y448 316 aa24.83■■□□□ 1.57
SEMA3B-210ENST00000611067 CC2D1BQ5T0F9 858 aaKnown RBP24.83■■□□□ 1.57
SEMA3B-210ENST00000611067 SETD1AO15047 1707 aaKnown RBP24.81■■□□□ 1.56
SEMA3B-210ENST00000611067 PTPRMP28827 1452 aa24.81■■□□□ 1.56
SEMA3B-210ENST00000611067 EVC2Q86UK5 1308 aa24.81■■□□□ 1.56
SEMA3B-210ENST00000611067 NRXN3Q9Y4C0 1643 aa24.8■■□□□ 1.56
SEMA3B-210ENST00000611067 C20orf194Q5TEA3 1177 aa24.8■■□□□ 1.56
SEMA3B-210ENST00000611067 DAXXQ9UER7 740 aaPredicted RBP24.79■■□□□ 1.56
SEMA3B-210ENST00000611067 SAFB2Q14151 953 aaKnown RBP eCLIP24.79■■□□□ 1.56
SEMA3B-210ENST00000611067 POGKQ9P215 609 aa24.79■■□□□ 1.56
SEMA3B-210ENST00000611067 RIMS1Q86UR5 1692 aaKnown RBP24.79■■□□□ 1.56
SEMA3B-210ENST00000611067 FAM161AQ3B820 660 aa24.78■■□□□ 1.56
SEMA3B-210ENST00000611067 PRAM1Q96QH2 718 aa24.77■■□□□ 1.56
SEMA3B-210ENST00000611067 BRPF3Q9ULD4 1205 aa24.77■■□□□ 1.56
SEMA3B-210ENST00000611067 TULP4Q9NRJ4 1543 aa24.76■■□□□ 1.55
SEMA3B-210ENST00000611067 SLC4A3P48751 1232 aa24.75■■□□□ 1.55
SEMA3B-210ENST00000611067 C8orf34Q49A92 452 aa24.75■■□□□ 1.55
SEMA3B-210ENST00000611067 PUS7Q96PZ0 661 aaKnown RBP24.75■■□□□ 1.55
SEMA3B-210ENST00000611067 DLC1Q96QB1 1528 aa24.74■■□□□ 1.55
SEMA3B-210ENST00000611067 FRAT1Q92837 279 aaPredicted RBP24.74■■□□□ 1.55
SEMA3B-210ENST00000611067 EID1Q9Y6B2 187 aa24.73■■□□□ 1.55
SEMA3B-210ENST00000611067 DUSP27Q5VZP5 1158 aa24.72■■□□□ 1.55
SEMA3B-210ENST00000611067 ADAMTS8Q9UP79 889 aa24.72■■□□□ 1.55
SEMA3B-210ENST00000611067 ABCC11Q96J66 1382 aa24.71■■□□□ 1.55
SEMA3B-210ENST00000611067 AMER1Q5JTC6 1135 aaPredicted RBP24.71■■□□□ 1.55
SEMA3B-210ENST00000611067 THEMISQ8N1K5 641 aaPredicted RBP24.71■■□□□ 1.55
SEMA3B-210ENST00000611067 ADAMTSL3P82987 1691 aa24.71■■□□□ 1.55
SEMA3B-210ENST00000611067 SLIT1O75093 1534 aa24.71■■□□□ 1.55
SEMA3B-210ENST00000611067 METP08581 1390 aa24.71■■□□□ 1.55
SEMA3B-210ENST00000611067 PLEKHG1Q9ULL1 1385 aa24.71■■□□□ 1.55
SEMA3B-210ENST00000611067 MINK1Q8N4C8 1332 aaPredicted RBP24.7■■□□□ 1.55
SEMA3B-210ENST00000611067 TXNDC2Q86VQ3 553 aa24.7■■□□□ 1.55
SEMA3B-210ENST00000611067 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.7■■□□□ 1.54
SEMA3B-210ENST00000611067 NPC1L1Q9UHC9 1359 aa24.7■■□□□ 1.54
SEMA3B-210ENST00000611067 ARHGAP23Q9P227 1491 aa24.69■■□□□ 1.54
SEMA3B-210ENST00000611067 LTKP29376 864 aa24.69■■□□□ 1.54
SEMA3B-210ENST00000611067 PLEKHH1Q9ULM0 1364 aa24.68■■□□□ 1.54
SEMA3B-210ENST00000611067 SRPK2P78362 688 aaKnown RBP24.68■■□□□ 1.54
SEMA3B-210ENST00000611067 ZNF521Q96K83 1311 aa24.68■■□□□ 1.54
SEMA3B-210ENST00000611067 CABP2Q9NPB3 220 aa24.68■■□□□ 1.54
SEMA3B-210ENST00000611067 SLC12A5Q9H2X9 1139 aa24.67■■□□□ 1.54
SEMA3B-210ENST00000611067 KNDC1Q76NI1 1749 aa24.66■■□□□ 1.54
SEMA3B-210ENST00000611067 CEP170BQ9Y4F5 1589 aaPredicted RBP24.66■■□□□ 1.54
SEMA3B-210ENST00000611067 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.65■■□□□ 1.54
SEMA3B-210ENST00000611067 ADAMTS13Q76LX8 1427 aa24.65■■□□□ 1.54
SEMA3B-210ENST00000611067 GOLGA2Q08379 1002 aa24.65■■□□□ 1.54
SEMA3B-210ENST00000611067 ATAD2Q6PL18 1390 aa24.64■■□□□ 1.54
SEMA3B-210ENST00000611067 CARD14Q9BXL6 1004 aa24.64■■□□□ 1.54
SEMA3B-210ENST00000611067 NINLQ9Y2I6 1382 aa24.64■■□□□ 1.53
SEMA3B-210ENST00000611067 WDR43Q15061 677 aaKnown RBP eCLIP24.63■■□□□ 1.537e-9■■■□□ 15.1
SEMA3B-210ENST00000611067 WAPLQ7Z5K2 1190 aa24.63■■□□□ 1.53
SEMA3B-210ENST00000611067 TECPR2O15040 1411 aa24.63■■□□□ 1.53
SEMA3B-210ENST00000611067 NSD3Q9BZ95 1437 aa24.63■■□□□ 1.53
SEMA3B-210ENST00000611067 PPP2R1AP30153 589 aa24.61■■□□□ 1.53
SEMA3B-210ENST00000611067 CPS1P31327 1500 aa24.61■■□□□ 1.53
SEMA3B-210ENST00000611067 ANKRD36BQ8N2N9 1353 aa24.61■■□□□ 1.53
SEMA3B-210ENST00000611067 FAM135BQ49AJ0 1406 aa24.61■■□□□ 1.53
SEMA3B-210ENST00000611067 FRAT2O75474 233 aaPredicted RBP24.6■■□□□ 1.53
SEMA3B-210ENST00000611067 SIRT1Q96EB6 747 aa24.59■■□□□ 1.53
SEMA3B-210ENST00000611067 CDK19Q9BWU1 502 aa24.59■■□□□ 1.53
SEMA3B-210ENST00000611067 SLFN5Q08AF3 891 aa24.58■■□□□ 1.53
SEMA3B-210ENST00000611067 RGS3P49796 1198 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms