RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 GOLGA6L6A8MZA4 724 aa5.86□□□□□ -1.47
HDDC2-208ENST00000609021 BECN1Q14457 450 aa5.86□□□□□ -1.47
HDDC2-208ENST00000609021 LRCH2Q5VUJ6 765 aa5.86□□□□□ -1.47
HDDC2-208ENST00000609021 SLC4A2P04920 1241 aa5.86□□□□□ -1.47
HDDC2-208ENST00000609021 MRE11P49959 708 aa5.86□□□□□ -1.47
HDDC2-208ENST00000609021 RBM26Q5T8P6 1007 aaKnown RBP5.86□□□□□ -1.47
HDDC2-208ENST00000609021 NBPF10Q6P3W6 841 aaKnown RBP5.86□□□□□ -1.47
HDDC2-208ENST00000609021 TSHZ1Q6ZSZ6 1077 aa5.86□□□□□ -1.47
HDDC2-208ENST00000609021 GOLGA6L1Q8N7Z2 621 aa5.86□□□□□ -1.47
HDDC2-208ENST00000609021 KCNH8Q96L42 1107 aa5.86□□□□□ -1.47
HDDC2-208ENST00000609021 VPS8Q8N3P4 1428 aa5.85□□□□□ -1.47
HDDC2-208ENST00000609021 IPO8O15397 1037 aaKnown RBP5.85□□□□□ -1.47
HDDC2-208ENST00000609021 RAPGEF6Q8TEU7 1601 aa5.85□□□□□ -1.47
HDDC2-208ENST00000609021 DHX16O60231 1041 aaKnown RBP5.85□□□□□ -1.47
HDDC2-208ENST00000609021 OFD1O75665 1012 aa5.85□□□□□ -1.47
HDDC2-208ENST00000609021 CDC42BPBQ9Y5S2 1711 aa5.85□□□□□ -1.47
HDDC2-208ENST00000609021 H0YHG0 523 aa5.85□□□□□ -1.47
HDDC2-208ENST00000609021 SARNPP82979 210 aaKnown RBP5.85□□□□□ -1.47
HDDC2-208ENST00000609021 HNRNPUQ00839 825 aaKnown RBP eCLIP5.85□□□□□ -1.47
HDDC2-208ENST00000609021 CARMIL1Q5VZK9 1371 aa5.84□□□□□ -1.47
HDDC2-208ENST00000609021 CT47B1P0C2W7 299 aaPredicted RBP5.84□□□□□ -1.47
HDDC2-208ENST00000609021 LIG1P18858 919 aa5.84□□□□□ -1.47
HDDC2-208ENST00000609021 NAP1L1P55209 391 aaKnown RBP5.84□□□□□ -1.47
HDDC2-208ENST00000609021 RIPK4P57078 832 aa5.84□□□□□ -1.47
HDDC2-208ENST00000609021 C1QBPQ07021 282 aaKnown RBP5.84□□□□□ -1.47
HDDC2-208ENST00000609021 ZRSR2Q15696 482 aaKnown RBP5.84□□□□□ -1.47
HDDC2-208ENST00000609021 CCDC96Q2M329 555 aa5.84□□□□□ -1.47
HDDC2-208ENST00000609021 GOLGA6L22H0YM25 854 aa5.84□□□□□ -1.47
HDDC2-208ENST00000609021 XRCC6P12956 609 aaKnown RBP eCLIP5.84□□□□□ -1.47
HDDC2-208ENST00000609021 BIRC2Q13490 618 aa5.84□□□□□ -1.47
HDDC2-208ENST00000609021 CSPP1Q1MSJ5 1256 aa5.84□□□□□ -1.47
HDDC2-208ENST00000609021 TMX4Q9H1E5 349 aaPredicted RBP5.84□□□□□ -1.47
HDDC2-208ENST00000609021 BSDC1Q9NW68 430 aaPredicted RBP5.84□□□□□ -1.47
HDDC2-208ENST00000609021 FYCO1Q9BQS8 1478 aa5.84□□□□□ -1.47
HDDC2-208ENST00000609021 CT47A1Q5JQC4 288 aaPredicted RBP5.83□□□□□ -1.48
HDDC2-208ENST00000609021 SLC26A8Q96RN1 970 aa5.83□□□□□ -1.48
HDDC2-208ENST00000609021 TDRD9Q8NDG6 1382 aaKnown RBP5.83□□□□□ -1.48
HDDC2-208ENST00000609021 KIF1CO43896 1103 aaKnown RBP5.83□□□□□ -1.48
HDDC2-208ENST00000609021 TPM3P06753 285 aa5.83□□□□□ -1.48
HDDC2-208ENST00000609021 SGSM3Q96HU1 749 aa5.83□□□□□ -1.48
HDDC2-208ENST00000609021 KIAA0586Q9BVV6 1533 aa5.83□□□□□ -1.48
HDDC2-208ENST00000609021 KDM5BQ9UGL1 1544 aa5.83□□□□□ -1.48
HDDC2-208ENST00000609021 PES1O00541 588 aaKnown RBP5.83□□□□□ -1.48
HDDC2-208ENST00000609021 ABCB7O75027 752 aa5.83□□□□□ -1.48
HDDC2-208ENST00000609021 NBPF3Q9H094 633 aa5.83□□□□□ -1.48
HDDC2-208ENST00000609021 NUCKS1Q9H1E3 243 aaKnown RBP5.83□□□□□ -1.48
HDDC2-208ENST00000609021 DEF6Q9H4E7 631 aa5.83□□□□□ -1.48
HDDC2-208ENST00000609021 IPO7O95373 1038 aaKnown RBP5.82□□□□□ -1.48
HDDC2-208ENST00000609021 BRPF1P55201 1214 aaPredicted RBP5.82□□□□□ -1.48
HDDC2-208ENST00000609021 POGKQ9P215 609 aa5.82□□□□□ -1.48
HDDC2-208ENST00000609021 CCER2I3L3R5 266 aa5.82□□□□□ -1.48
HDDC2-208ENST00000609021 MFAP1P55081 439 aaKnown RBP5.82□□□□□ -1.48
HDDC2-208ENST00000609021 CREBRFQ8IUR6 639 aa5.82□□□□□ -1.48
HDDC2-208ENST00000609021 TOMM22Q9NS69 142 aa5.82□□□□□ -1.48
HDDC2-208ENST00000609021 KNSTRNQ9Y448 316 aa5.82□□□□□ -1.48
HDDC2-208ENST00000609021 GCC2Q8IWJ2 1684 aa5.81□□□□□ -1.48
HDDC2-208ENST00000609021 HMGN5P82970 282 aaKnown RBP5.81□□□□□ -1.48
HDDC2-208ENST00000609021 GZF1Q9H116 711 aaPredicted RBP5.81□□□□□ -1.48
HDDC2-208ENST00000609021 RSPH14Q9UHP6 348 aa5.81□□□□□ -1.48
HDDC2-208ENST00000609021 ANAPC4Q9UJX5 808 aa5.81□□□□□ -1.48
HDDC2-208ENST00000609021 KIF14Q15058 1648 aa5.81□□□□□ -1.48
HDDC2-208ENST00000609021 PDE4AP27815 886 aa5.81□□□□□ -1.48
HDDC2-208ENST00000609021 CCDC181Q5TID7 509 aa5.81□□□□□ -1.48
HDDC2-208ENST00000609021 ZSCAN30Q86W11 494 aa5.81□□□□□ -1.48
HDDC2-208ENST00000609021 TRERF1Q96PN7 1200 aa5.81□□□□□ -1.48
HDDC2-208ENST00000609021 BRMS1Q9HCU9 246 aa5.81□□□□□ -1.48
HDDC2-208ENST00000609021 PPRC1Q5VV67 1664 aaKnown RBP5.81□□□□□ -1.48
HDDC2-208ENST00000609021 CASKIN1Q8WXD9 1431 aa5.81□□□□□ -1.48
HDDC2-208ENST00000609021 ARID3CA6NKF2 412 aa5.81□□□□□ -1.48
HDDC2-208ENST00000609021 SLC4A3P48751 1232 aa5.81□□□□□ -1.48
HDDC2-208ENST00000609021 HECW1Q76N89 1606 aa5.8□□□□□ -1.48
HDDC2-208ENST00000609021 NUP153P49790 1475 aaKnown RBP5.8□□□□□ -1.48
HDDC2-208ENST00000609021 MLECQ14165 292 aa5.8□□□□□ -1.48
HDDC2-208ENST00000609021 GORABQ5T7V8 394 aa5.8□□□□□ -1.48
HDDC2-208ENST00000609021 FAM210AQ96ND0 272 aa5.8□□□□□ -1.48
HDDC2-208ENST00000609021 DONSONQ9NYP3 566 aa5.8□□□□□ -1.48
HDDC2-208ENST00000609021 ZCCHC11Q5TAX3 1644 aaKnown RBP5.8□□□□□ -1.48
HDDC2-208ENST00000609021 ITFG2Q969R8 447 aa5.8□□□□□ -1.48
HDDC2-208ENST00000609021 NOL10Q9BSC4 688 aaKnown RBP5.8□□□□□ -1.48
HDDC2-208ENST00000609021 GOLGA6CA6NDK9 693 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 GOLGA6BA6NDN3 693 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 BRD1O95696 1058 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 GOLGA6DP0CG33 693 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 SETSIPP0DME0 302 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 MTA1Q13330 715 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 SETDB1Q15047 1291 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 MFSD4BQ5TF39 518 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 ICE2Q659A1 982 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 CCDC91Q7Z6B0 441 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 MSL3Q8N5Y2 521 aaKnown RBP5.79□□□□□ -1.48
HDDC2-208ENST00000609021 GOLGA6AQ9NYA3 693 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 RRBP1Q9P2E9 1410 aaKnown RBP5.79□□□□□ -1.48
HDDC2-208ENST00000609021 MYBPC2Q14324 1141 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 ACRBPQ8NEB7 543 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 TSPAN18Q96SJ8 248 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 ISY1Q9ULR0 285 aaKnown RBP5.79□□□□□ -1.48
HDDC2-208ENST00000609021 SUPT6HQ7KZ85 1726 aaKnown RBP5.79□□□□□ -1.48
HDDC2-208ENST00000609021 PPP1R12AO14974 1030 aaPredicted RBP5.79□□□□□ -1.48
HDDC2-208ENST00000609021 CCP110O43303 1012 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 ATL2Q8NHH9 583 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms