RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 NOL7Q9UMY1 257 aaKnown RBP15.76■□□□□ 0.11
CTCFL-218ENST00000608440 CD109Q6YHK3 1445 aa15.75■□□□□ 0.11
CTCFL-218ENST00000608440 ADGRL1O94910 1474 aa15.75■□□□□ 0.11
CTCFL-218ENST00000608440 MAST1Q9Y2H9 1570 aa15.75■□□□□ 0.11
CTCFL-218ENST00000608440 RALBP1Q15311 655 aa15.75■□□□□ 0.11
CTCFL-218ENST00000608440 TNPO1Q92973 898 aaKnown RBP15.75■□□□□ 0.11
CTCFL-218ENST00000608440 FAM177BA6PVY3 158 aa15.74■□□□□ 0.11
CTCFL-218ENST00000608440 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.74■□□□□ 0.11
CTCFL-218ENST00000608440 PZPP20742 1482 aa15.74■□□□□ 0.11
CTCFL-218ENST00000608440 CERS3Q8IU89 383 aa15.74■□□□□ 0.11
CTCFL-218ENST00000608440 USP47Q96K76 1375 aa15.73■□□□□ 0.11
CTCFL-218ENST00000608440 NLRP13Q86W25 1043 aa15.73■□□□□ 0.11
CTCFL-218ENST00000608440 SCAPERQ9BY12 1400 aa15.73■□□□□ 0.11
CTCFL-218ENST00000608440 CSPP1Q1MSJ5 1256 aa15.73■□□□□ 0.11
CTCFL-218ENST00000608440 SPAG9O60271 1321 aaKnown RBP15.72■□□□□ 0.11
CTCFL-218ENST00000608440 MAPK8IP3Q9UPT6 1336 aa15.72■□□□□ 0.11
CTCFL-218ENST00000608440 ZNF710Q8N1W2 664 aa15.72■□□□□ 0.11
CTCFL-218ENST00000608440 SECISBP2LQ93073 1101 aaKnown RBP15.72■□□□□ 0.11
CTCFL-218ENST00000608440 PLXNC1O60486 1568 aa15.72■□□□□ 0.11
CTCFL-218ENST00000608440 NUP155O75694 1391 aa15.71■□□□□ 0.11
CTCFL-218ENST00000608440 ZNF771Q7L3S4 317 aaPredicted RBP15.71■□□□□ 0.11
CTCFL-218ENST00000608440 ZNF692Q9BU19 519 aaPredicted RBP15.71■□□□□ 0.11
CTCFL-218ENST00000608440 DHX37Q8IY37 1157 aaKnown RBP15.7■□□□□ 0.1
CTCFL-218ENST00000608440 ZFYVE16Q7Z3T8 1539 aa15.7■□□□□ 0.1
CTCFL-218ENST00000608440 MFAP1P55081 439 aaKnown RBP15.7■□□□□ 0.1
CTCFL-218ENST00000608440 SKOR2Q2VWA4 1001 aaPredicted RBP15.7■□□□□ 0.1
CTCFL-218ENST00000608440 HSCBQ8IWL3 235 aa15.7■□□□□ 0.1
CTCFL-218ENST00000608440 GBP4Q96PP9 640 aa15.7■□□□□ 0.1
CTCFL-218ENST00000608440 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
CTCFL-218ENST00000608440 ZKSCAN5Q9Y2L8 839 aa15.69■□□□□ 0.1
CTCFL-218ENST00000608440 IRX5P78411 483 aaPredicted RBP15.69■□□□□ 0.1
CTCFL-218ENST00000608440 TAF3Q5VWG9 929 aa15.69■□□□□ 0.1
CTCFL-218ENST00000608440 BCORL1Q5H9F3 1711 aa15.69■□□□□ 0.1
CTCFL-218ENST00000608440 POLR1AO95602 1720 aaPredicted RBP15.68■□□□□ 0.1
CTCFL-218ENST00000608440 KCNJ4P48050 445 aa15.68■□□□□ 0.1
CTCFL-218ENST00000608440 DUSP27Q5VZP5 1158 aa15.68■□□□□ 0.1
CTCFL-218ENST00000608440 AEBP1Q8IUX7 1158 aa15.67■□□□□ 0.1
CTCFL-218ENST00000608440 C22orf23Q9BZE7 217 aa15.67■□□□□ 0.1
CTCFL-218ENST00000608440 PKD2Q13563 968 aa15.67■□□□□ 0.1
CTCFL-218ENST00000608440 DUOX2Q9NRD8 1548 aa15.67■□□□□ 0.1
CTCFL-218ENST00000608440 BCAR3O75815 825 aa15.67■□□□□ 0.1
CTCFL-218ENST00000608440 HS1BP3Q53T59 392 aa15.67■□□□□ 0.1
CTCFL-218ENST00000608440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.67■□□□□ 0.11e-10■□□□□ 8.3
CTCFL-218ENST00000608440 DDX49Q9Y6V7 483 aaKnown RBP15.67■□□□□ 0.1
CTCFL-218ENST00000608440 ANKRD30BQ9BXX2 1392 aa15.66■□□□□ 0.1
CTCFL-218ENST00000608440 IRX3P78415 501 aaPredicted RBP15.66■□□□□ 0.1
CTCFL-218ENST00000608440 ATP7AQ04656 1500 aa15.66■□□□□ 0.1
CTCFL-218ENST00000608440 TEX2Q8IWB9 1127 aa15.65■□□□□ 0.1
CTCFL-218ENST00000608440 MYRIPQ8NFW9 859 aa15.65■□□□□ 0.1
CTCFL-218ENST00000608440 VIRMAQ69YN4 1812 aaKnown RBP15.64■□□□□ 0.09
CTCFL-218ENST00000608440 CFAP74Q9C0B2 1584 aa15.64■□□□□ 0.09
CTCFL-218ENST00000608440 INO80Q9ULG1 1556 aaPredicted RBP15.64■□□□□ 0.09
CTCFL-218ENST00000608440 FAM69CQ0P6D2 419 aa15.64■□□□□ 0.09
CTCFL-218ENST00000608440 CC2D1BQ5T0F9 858 aaKnown RBP15.64■□□□□ 0.09
CTCFL-218ENST00000608440 KDM5DQ9BY66 1539 aa15.64■□□□□ 0.09
CTCFL-218ENST00000608440 ROCK2O75116 1388 aaKnown RBP15.64■□□□□ 0.09
CTCFL-218ENST00000608440 RTEL1-TNFRSF6BF6WH68 1400 aa15.64■□□□□ 0.09
CTCFL-218ENST00000608440 ERBINQ96RT1 1412 aa15.64■□□□□ 0.09
CTCFL-218ENST00000608440 RBSNQ9H1K0 784 aa15.63■□□□□ 0.09
CTCFL-218ENST00000608440 ZNF518AQ6AHZ1 1483 aa15.63■□□□□ 0.09
CTCFL-218ENST00000608440 POGZQ7Z3K3 1410 aa15.63■□□□□ 0.09
CTCFL-218ENST00000608440 ZBTB9Q96C00 473 aa15.62■□□□□ 0.09
CTCFL-218ENST00000608440 MAP3K4Q9Y6R4 1608 aa15.62■□□□□ 0.09
CTCFL-218ENST00000608440 DIP2BQ9P265 1576 aa15.62■□□□□ 0.09
CTCFL-218ENST00000608440 FAM135AQ9P2D6 1515 aa15.62■□□□□ 0.09
CTCFL-218ENST00000608440 TEX14Q8IWB6 1497 aa15.62■□□□□ 0.09
CTCFL-218ENST00000608440 COG6Q9Y2V7 657 aa15.62■□□□□ 0.09
CTCFL-218ENST00000608440 U2AF2P26368 475 aaKnown RBP eCLIP15.61■□□□□ 0.09
CTCFL-218ENST00000608440 EIF3AQ14152 1382 aaKnown RBP15.61■□□□□ 0.09
CTCFL-218ENST00000608440 UNC13BO14795 1591 aa15.61■□□□□ 0.09
CTCFL-218ENST00000608440 HSP90AB1P08238 724 aaKnown RBP15.6■□□□□ 0.09
CTCFL-218ENST00000608440 MPNDQ8N594 471 aa15.6■□□□□ 0.09
CTCFL-218ENST00000608440 RGS22Q8NE09 1264 aa15.6■□□□□ 0.09
CTCFL-218ENST00000608440 NEO1Q92859 1461 aa15.6■□□□□ 0.09
CTCFL-218ENST00000608440 RAB3GAP1Q15042 981 aa15.6■□□□□ 0.09
CTCFL-218ENST00000608440 CAVIN1Q6NZI2 390 aaKnown RBP15.6■□□□□ 0.09
CTCFL-218ENST00000608440 CLUAP1Q96AJ1 413 aa15.6■□□□□ 0.09
CTCFL-218ENST00000608440 PDLIM2Q96JY6 352 aa15.6■□□□□ 0.09
CTCFL-218ENST00000608440 ADAMTS8Q9UP79 889 aa15.6■□□□□ 0.09
CTCFL-218ENST00000608440 GLI2P10070 1586 aa15.6■□□□□ 0.09
CTCFL-218ENST00000608440 RPRD2Q5VT52 1461 aaKnown RBP15.6■□□□□ 0.09
CTCFL-218ENST00000608440 DDIT3P35638 169 aa15.59■□□□□ 0.09
CTCFL-218ENST00000608440 PANK1Q8TE04 598 aa15.59■□□□□ 0.09
CTCFL-218ENST00000608440 RAPGEF3O95398 923 aa15.59■□□□□ 0.09
CTCFL-218ENST00000608440 GOLGA2Q08379 1002 aa15.59■□□□□ 0.09
CTCFL-218ENST00000608440 PDCL2Q8N4E4 241 aa15.59■□□□□ 0.09
CTCFL-218ENST00000608440 PDZRN3Q9UPQ7 1066 aa15.59■□□□□ 0.09
CTCFL-218ENST00000608440 PLEKHH1Q9ULM0 1364 aa15.58■□□□□ 0.09
CTCFL-218ENST00000608440 ST20-MTHFSA0A0A6YYL1 179 aa15.58■□□□□ 0.08
CTCFL-218ENST00000608440 GOLGA6L22H0YM25 854 aa15.58■□□□□ 0.08
CTCFL-218ENST00000608440 PTMAP06454 111 aaKnown RBP15.58■□□□□ 0.08
CTCFL-218ENST00000608440 SSFA2P28290 1259 aa15.58■□□□□ 0.08
CTCFL-218ENST00000608440 PRIM1P49642 420 aaKnown RBP15.57■□□□□ 0.08
CTCFL-218ENST00000608440 CARD11Q9BXL7 1154 aa15.57■□□□□ 0.08
CTCFL-218ENST00000608440 CCDC39Q9UFE4 941 aa15.57■□□□□ 0.08
CTCFL-218ENST00000608440 KIDINS220Q9ULH0 1771 aa15.57■□□□□ 0.08
CTCFL-218ENST00000608440 KDM5CP41229 1560 aa15.57■□□□□ 0.08
CTCFL-218ENST00000608440 BRD2P25440 801 aaKnown RBP15.57■□□□□ 0.08
CTCFL-218ENST00000608440 MCM5P33992 734 aa15.57■□□□□ 0.08
CTCFL-218ENST00000608440 KLHL40Q2TBA0 621 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms