RNA–Protein interactions for RNA: ENST00000606248.5

MED16-210, Transcript of mediator complex subunit 16, humanhuman

TSL 1 (best)

Gene MED16, Length 3,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-210ENST00000606248 ABCA6Q8N139 1617 aa17.88■□□□□ 0.45
MED16-210ENST00000606248 FBLN1P23142 703 aa17.88■□□□□ 0.45
MED16-210ENST00000606248 GGNBP2Q9H3C7 697 aa17.88■□□□□ 0.45
MED16-210ENST00000606248 NPC1L1Q9UHC9 1359 aa17.87■□□□□ 0.45
MED16-210ENST00000606248 EIF5BO60841 1220 aaKnown RBP17.87■□□□□ 0.45
MED16-210ENST00000606248 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
MED16-210ENST00000606248 ADGRL1O94910 1474 aa17.86■□□□□ 0.45
MED16-210ENST00000606248 ATP7AQ04656 1500 aa17.86■□□□□ 0.45
MED16-210ENST00000606248 FTSJ3Q8IY81 847 aaKnown RBP17.84■□□□□ 0.45
MED16-210ENST00000606248 POLR3AO14802 1390 aaPredicted RBP17.84■□□□□ 0.45
MED16-210ENST00000606248 EXOSC9Q06265 439 aaKnown RBP17.83■□□□□ 0.44
MED16-210ENST00000606248 STAC3Q96MF2 364 aa17.83■□□□□ 0.44
MED16-210ENST00000606248 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.44
MED16-210ENST00000606248 MFAP1P55081 439 aaKnown RBP17.83■□□□□ 0.44
MED16-210ENST00000606248 GZF1Q9H116 711 aaPredicted RBP17.83■□□□□ 0.44
MED16-210ENST00000606248 RTEL1-TNFRSF6BF6WH68 1400 aa17.83■□□□□ 0.44
MED16-210ENST00000606248 SRPK2P78362 688 aaKnown RBP17.82■□□□□ 0.44
MED16-210ENST00000606248 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
MED16-210ENST00000606248 TET3O43151 1660 aa17.82■□□□□ 0.44
MED16-210ENST00000606248 CFAP53Q96M91 514 aa17.82■□□□□ 0.44
MED16-210ENST00000606248 SMC4Q9NTJ3 1288 aa17.82■□□□□ 0.44
MED16-210ENST00000606248 MROH2AA6NES4 1674 aa17.81■□□□□ 0.44
MED16-210ENST00000606248 ITPRIPQ8IWB1 547 aa17.81■□□□□ 0.44
MED16-210ENST00000606248 MAPK8IP3Q9UPT6 1336 aa17.81■□□□□ 0.44
MED16-210ENST00000606248 C14orf93Q9H972 538 aaKnown RBP17.81■□□□□ 0.44
MED16-210ENST00000606248 RAPGEF3O95398 923 aa17.8■□□□□ 0.44
MED16-210ENST00000606248 MINK1Q8N4C8 1332 aaPredicted RBP17.79■□□□□ 0.44
MED16-210ENST00000606248 PMFBP1Q8TBY8 1022 aa17.79■□□□□ 0.44
MED16-210ENST00000606248 TBC1D2Q9BYX2 928 aa17.79■□□□□ 0.44
MED16-210ENST00000606248 BECN1Q14457 450 aa17.78■□□□□ 0.44
MED16-210ENST00000606248 KIF1BO60333 1816 aa17.78■□□□□ 0.44
MED16-210ENST00000606248 UPF2Q9HAU5 1272 aaKnown RBP17.78■□□□□ 0.44
MED16-210ENST00000606248 DZIP1LQ8IYY4 767 aaKnown RBP17.77■□□□□ 0.44
MED16-210ENST00000606248 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.44
MED16-210ENST00000606248 RWDD1Q9H446 243 aaPredicted RBP17.77■□□□□ 0.44
MED16-210ENST00000606248 MVPQ14764 893 aaKnown RBP17.76■□□□□ 0.43
MED16-210ENST00000606248 ZKSCAN2Q63HK3 967 aa17.76■□□□□ 0.43
MED16-210ENST00000606248 TRIM27P14373 513 aa17.76■□□□□ 0.43
MED16-210ENST00000606248 WDR63Q8IWG1 891 aa17.76■□□□□ 0.43
MED16-210ENST00000606248 ELL2O00472 640 aaPredicted RBP17.75■□□□□ 0.43
MED16-210ENST00000606248 MYH16Q9H6N6 1097 aa17.75■□□□□ 0.43
MED16-210ENST00000606248 NOB1Q9ULX3 412 aaKnown RBP17.75■□□□□ 0.43
MED16-210ENST00000606248 DEPDC5O75140 1603 aa17.75■□□□□ 0.43
MED16-210ENST00000606248 MROH1Q8NDA8 1641 aa17.75■□□□□ 0.43
MED16-210ENST00000606248 NPATQ14207 1427 aa17.74■□□□□ 0.43
MED16-210ENST00000606248 PPRC1Q5VV67 1664 aaKnown RBP17.74■□□□□ 0.43
MED16-210ENST00000606248 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
MED16-210ENST00000606248 TBC1D32Q96NH3 1257 aa17.74■□□□□ 0.43
MED16-210ENST00000606248 SLC24A1O60721 1099 aa17.73■□□□□ 0.43
MED16-210ENST00000606248 THUMPD2Q9BTF0 503 aaKnown RBP17.73■□□□□ 0.43
MED16-210ENST00000606248 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.73■□□□□ 0.43
MED16-210ENST00000606248 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
MED16-210ENST00000606248 EVC2Q86UK5 1308 aa17.73■□□□□ 0.43
MED16-210ENST00000606248 RIPK4P57078 832 aa17.73■□□□□ 0.43
MED16-210ENST00000606248 MYOM2P54296 1465 aa17.72■□□□□ 0.43
MED16-210ENST00000606248 TMPOP42166 694 aaKnown RBP17.72■□□□□ 0.43
MED16-210ENST00000606248 TMEM57Q8N5G2 664 aa17.72■□□□□ 0.43
MED16-210ENST00000606248 ASXL2Q76L83 1435 aa17.72■□□□□ 0.43
MED16-210ENST00000606248 C1orf115Q9H7X2 142 aa17.72■□□□□ 0.43
MED16-210ENST00000606248 TRIM35Q9UPQ4 493 aa17.72■□□□□ 0.43
MED16-210ENST00000606248 INO80Q9ULG1 1556 aaPredicted RBP17.71■□□□□ 0.43
MED16-210ENST00000606248 NLRP1Q9C000 1473 aa17.71■□□□□ 0.43
MED16-210ENST00000606248 LNPKQ9C0E8 428 aa17.71■□□□□ 0.43
MED16-210ENST00000606248 NGEFQ8N5V2 710 aa17.71■□□□□ 0.43
MED16-210ENST00000606248 FOXD4L1Q9NU39 408 aa17.71■□□□□ 0.42
MED16-210ENST00000606248 VWDEQ8N2E2 1590 aa17.7■□□□□ 0.42
MED16-210ENST00000606248 EFCAB6Q5THR3 1501 aa17.7■□□□□ 0.42
MED16-210ENST00000606248 UHRF1BP1LA0JNW5 1464 aa17.7■□□□□ 0.42
MED16-210ENST00000606248 ZNF518AQ6AHZ1 1483 aa17.7■□□□□ 0.42
MED16-210ENST00000606248 IDI1Q13907 227 aa17.7■□□□□ 0.42
MED16-210ENST00000606248 ANTXR1Q9H6X2 564 aa17.7■□□□□ 0.42
MED16-210ENST00000606248 HMOX1P09601 288 aa17.69■□□□□ 0.42
MED16-210ENST00000606248 C22orf23Q9BZE7 217 aa17.69■□□□□ 0.42
MED16-210ENST00000606248 QRICH2Q9H0J4 1663 aa17.69■□□□□ 0.42
MED16-210ENST00000606248 KIAA1210Q9ULL0 1709 aa17.68■□□□□ 0.42
MED16-210ENST00000606248 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
MED16-210ENST00000606248 PRAM1Q96QH2 718 aa17.68■□□□□ 0.42
MED16-210ENST00000606248 A0A1W2PP64 1363 aa17.68■□□□□ 0.42
MED16-210ENST00000606248 IQSEC2Q5JU85 1478 aa17.68■□□□□ 0.42
MED16-210ENST00000606248 KIDINS220Q9ULH0 1771 aa17.67■□□□□ 0.42
MED16-210ENST00000606248 FYB1O15117 783 aa17.67■□□□□ 0.42
MED16-210ENST00000606248 CD109Q6YHK3 1445 aa17.67■□□□□ 0.42
MED16-210ENST00000606248 ATF7IPQ6VMQ6 1270 aa17.67■□□□□ 0.42
MED16-210ENST00000606248 SBNO2Q9Y2G9 1366 aa17.66■□□□□ 0.42
MED16-210ENST00000606248 NINLQ9Y2I6 1382 aa17.66■□□□□ 0.42
MED16-210ENST00000606248 PLEKHF1Q96S99 279 aa17.66■□□□□ 0.42
MED16-210ENST00000606248 VGFO15240 615 aaPredicted RBP17.65■□□□□ 0.42
MED16-210ENST00000606248 PANK2Q9BZ23 570 aa17.65■□□□□ 0.42
MED16-210ENST00000606248 CABP1Q9NZU7 370 aa17.65■□□□□ 0.42
MED16-210ENST00000606248 ABCA9Q8IUA7 1624 aa17.64■□□□□ 0.42
MED16-210ENST00000606248 CCDC27Q2M243 656 aa17.64■□□□□ 0.41
MED16-210ENST00000606248 ANKRD36BQ8N2N9 1353 aa17.64■□□□□ 0.41
MED16-210ENST00000606248 FBXO31Q5XUX0 539 aaPredicted RBP17.64■□□□□ 0.41
MED16-210ENST00000606248 VIRMAQ69YN4 1812 aaKnown RBP17.64■□□□□ 0.41
MED16-210ENST00000606248 ADGRB1O14514 1584 aa17.63■□□□□ 0.41
MED16-210ENST00000606248 IFT172Q9UG01 1749 aa17.63■□□□□ 0.41
MED16-210ENST00000606248 NRXN1Q9ULB1 1477 aa17.63■□□□□ 0.41
MED16-210ENST00000606248 ADGRB3O60242 1522 aa17.63■□□□□ 0.41
MED16-210ENST00000606248 TULP4Q9NRJ4 1543 aa17.62■□□□□ 0.41
MED16-210ENST00000606248 PRKAR2BP31323 418 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms