RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ABCC11Q96J66 1382 aa18.02■□□□□ 0.47
CTSA-210ENST00000606000 DCAF11Q8TEB1 546 aa18.01■□□□□ 0.47
CTSA-210ENST00000606000 JCADQ9P266 1359 aa18.01■□□□□ 0.47
CTSA-210ENST00000606000 LRP6O75581 1613 aa18.01■□□□□ 0.47
CTSA-210ENST00000606000 FMN2Q9NZ56 1722 aa18■□□□□ 0.47
CTSA-210ENST00000606000 ORAI2Q96SN7 254 aa17.98■□□□□ 0.47
CTSA-210ENST00000606000 RGS17Q9UGC6 210 aaPredicted RBP17.97■□□□□ 0.47
CTSA-210ENST00000606000 RGPD8O14715 1765 aaPredicted RBP17.95■□□□□ 0.46
CTSA-210ENST00000606000 DLC1Q96QB1 1528 aa17.95■□□□□ 0.46
CTSA-210ENST00000606000 NUTM2FA1L443 756 aa17.95■□□□□ 0.46
CTSA-210ENST00000606000 SAFB2Q14151 953 aaKnown RBP eCLIP17.94■□□□□ 0.46
CTSA-210ENST00000606000 ARHGEF28Q8N1W1 1705 aaKnown RBP17.94■□□□□ 0.46
CTSA-210ENST00000606000 PRAM1Q96QH2 718 aa17.93■□□□□ 0.46
CTSA-210ENST00000606000 TRAK1Q9UPV9 953 aa17.91■□□□□ 0.46
CTSA-210ENST00000606000 SPATA31A6Q5VVP1 1343 aa17.91■□□□□ 0.46
CTSA-210ENST00000606000 ADGRB2O60241 1585 aa17.91■□□□□ 0.46
CTSA-210ENST00000606000 USP32Q8NFA0 1604 aa17.9■□□□□ 0.46
CTSA-210ENST00000606000 ESCO1Q5FWF5 840 aa17.9■□□□□ 0.46
CTSA-210ENST00000606000 SIRT1Q96EB6 747 aa17.9■□□□□ 0.46
CTSA-210ENST00000606000 SIN3AQ96ST3 1273 aa17.9■□□□□ 0.46
CTSA-210ENST00000606000 PNPLA6Q8IY17 1366 aa17.9■□□□□ 0.46
CTSA-210ENST00000606000 KIAA1210Q9ULL0 1709 aa17.89■□□□□ 0.46
CTSA-210ENST00000606000 NUTM2BA6NNL0 878 aaPredicted RBP17.89■□□□□ 0.45
CTSA-210ENST00000606000 NUTM2EB1AL46 878 aaPredicted RBP17.89■□□□□ 0.45
CTSA-210ENST00000606000 SOCS7O14512 581 aa17.89■□□□□ 0.45
CTSA-210ENST00000606000 NUTM2AQ8IVF1 878 aaPredicted RBP17.89■□□□□ 0.45
CTSA-210ENST00000606000 PXDNQ92626 1479 aa17.88■□□□□ 0.45
CTSA-210ENST00000606000 KIF1AQ12756 1690 aa17.88■□□□□ 0.45
CTSA-210ENST00000606000 SOS2Q07890 1332 aaPredicted RBP17.88■□□□□ 0.45
CTSA-210ENST00000606000 XPCQ01831 940 aaPredicted RBP17.87■□□□□ 0.45
CTSA-210ENST00000606000 POTEAQ6S8J7 498 aa17.87■□□□□ 0.45
CTSA-210ENST00000606000 LRRC59Q96AG4 307 aaKnown RBP17.86■□□□□ 0.45
CTSA-210ENST00000606000 HIRIP3Q9BW71 556 aaPredicted RBP17.86■□□□□ 0.45
CTSA-210ENST00000606000 POGKQ9P215 609 aa17.86■□□□□ 0.45
CTSA-210ENST00000606000 MEX3CQ5U5Q3 659 aaKnown RBP17.85■□□□□ 0.45
CTSA-210ENST00000606000 COL22A1Q8NFW1 1626 aaPredicted RBP17.85■□□□□ 0.45
CTSA-210ENST00000606000 STAC3Q96MF2 364 aa17.85■□□□□ 0.45
CTSA-210ENST00000606000 MINK1Q8N4C8 1332 aaPredicted RBP17.84■□□□□ 0.45
CTSA-210ENST00000606000 FOXO3O43524 673 aa17.84■□□□□ 0.45
CTSA-210ENST00000606000 TRIM26Q12899 539 aaPredicted RBP17.83■□□□□ 0.44
CTSA-210ENST00000606000 NEUROD1Q13562 356 aa17.83■□□□□ 0.44
CTSA-210ENST00000606000 NPHP3Q7Z494 1330 aa17.82■□□□□ 0.44
CTSA-210ENST00000606000 NBPF1Q3BBV0 1214 aa17.82■□□□□ 0.44
CTSA-210ENST00000606000 L3MBTL2Q969R5 705 aa17.82■□□□□ 0.44
CTSA-210ENST00000606000 TRPM1Q7Z4N2 1603 aa17.82■□□□□ 0.44
CTSA-210ENST00000606000 TULP4Q9NRJ4 1543 aa17.8■□□□□ 0.44
CTSA-210ENST00000606000 PRR36Q9H6K5 1346 aa17.79■□□□□ 0.44
CTSA-210ENST00000606000 ANKARQ7Z5J8 1434 aa17.79■□□□□ 0.44
CTSA-210ENST00000606000 PHF8Q9UPP1 1060 aa17.78■□□□□ 0.44
CTSA-210ENST00000606000 ADAMTS2O95450 1211 aa17.77■□□□□ 0.44
CTSA-210ENST00000606000 MARF1Q9Y4F3 1742 aaKnown RBP17.77■□□□□ 0.44
CTSA-210ENST00000606000 QRICH2Q9H0J4 1663 aa17.77■□□□□ 0.43
CTSA-210ENST00000606000 AFF2P51816 1311 aa17.76■□□□□ 0.43
CTSA-210ENST00000606000 TRPM3Q9HCF6 1732 aaPredicted RBP17.76■□□□□ 0.43
CTSA-210ENST00000606000 PMFBP1Q8TBY8 1022 aa17.76■□□□□ 0.43
CTSA-210ENST00000606000 C8orf37Q96NL8 207 aa17.76■□□□□ 0.43
CTSA-210ENST00000606000 ATP7BP35670 1465 aa17.75■□□□□ 0.43
CTSA-210ENST00000606000 ABCA3Q99758 1704 aa17.75■□□□□ 0.43
CTSA-210ENST00000606000 TOPAZ1Q8N9V7 1692 aa17.75■□□□□ 0.43
CTSA-210ENST00000606000 WASLO00401 505 aaPredicted RBP17.75■□□□□ 0.43
CTSA-210ENST00000606000 ITSN1Q15811 1721 aa17.75■□□□□ 0.43
CTSA-210ENST00000606000 KRT28Q7Z3Y7 464 aa17.74■□□□□ 0.43
CTSA-210ENST00000606000 SPATA31A3Q5VYP0 1347 aa17.73■□□□□ 0.43
CTSA-210ENST00000606000 TNS3Q68CZ2 1445 aa17.73■□□□□ 0.43
CTSA-210ENST00000606000 ZNF772Q68DY9 489 aaPredicted RBP17.72■□□□□ 0.43
CTSA-210ENST00000606000 EIF3AQ14152 1382 aaKnown RBP17.71■□□□□ 0.43
CTSA-210ENST00000606000 PLEKHG5O94827 1062 aa17.71■□□□□ 0.43
CTSA-210ENST00000606000 ALS2Q96Q42 1657 aa17.71■□□□□ 0.42
CTSA-210ENST00000606000 NBPF8Q3BBV2 869 aa17.7■□□□□ 0.42
CTSA-210ENST00000606000 PSME1Q06323 249 aa17.68■□□□□ 0.42
CTSA-210ENST00000606000 NGLY1Q96IV0 654 aa17.68■□□□□ 0.42
CTSA-210ENST00000606000 CDK19Q9BWU1 502 aa17.68■□□□□ 0.42
CTSA-210ENST00000606000 CENPJQ9HC77 1338 aaPredicted RBP17.68■□□□□ 0.42
CTSA-210ENST00000606000 SBNO1A3KN83 1393 aa17.67■□□□□ 0.42
CTSA-210ENST00000606000 ROCK2O75116 1388 aaKnown RBP17.67■□□□□ 0.42
CTSA-210ENST00000606000 CABLES1Q8TDN4 633 aa17.67■□□□□ 0.42
CTSA-210ENST00000606000 NUDT16Q96DE0 195 aaKnown RBP17.67■□□□□ 0.42
CTSA-210ENST00000606000 CRYBG1Q9Y4K1 1723 aa17.67■□□□□ 0.42
CTSA-210ENST00000606000 LMOD2Q6P5Q4 547 aa17.66■□□□□ 0.42
CTSA-210ENST00000606000 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
CTSA-210ENST00000606000 PLCH1Q4KWH8 1693 aa17.65■□□□□ 0.42
CTSA-210ENST00000606000 RGS12O14924 1447 aa17.64■□□□□ 0.41
CTSA-210ENST00000606000 RXRBP28702 533 aa17.63■□□□□ 0.41
CTSA-210ENST00000606000 NGDNQ8NEJ9 315 aaKnown RBP17.63■□□□□ 0.41
CTSA-210ENST00000606000 QTRT2Q9H974 415 aaKnown RBP17.63■□□□□ 0.41
CTSA-210ENST00000606000 USP21Q9UK80 565 aa17.63■□□□□ 0.41
CTSA-210ENST00000606000 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.63■□□□□ 0.41
CTSA-210ENST00000606000 GPRASP1Q5JY77 1395 aa17.63■□□□□ 0.41
CTSA-210ENST00000606000 BCL9LQ86UU0 1499 aa17.63■□□□□ 0.41
CTSA-210ENST00000606000 FNBP4Q8N3X1 1017 aaPredicted RBP17.62■□□□□ 0.41
CTSA-210ENST00000606000 CABP2Q9NPB3 220 aa17.62■□□□□ 0.41
CTSA-210ENST00000606000 ARHGEF10O15013 1369 aa17.62■□□□□ 0.41
CTSA-210ENST00000606000 RALGAPBQ86X10 1494 aa17.62■□□□□ 0.41
CTSA-210ENST00000606000 SRPK2P78362 688 aaKnown RBP17.61■□□□□ 0.41
CTSA-210ENST00000606000 ATRNO75882 1429 aa17.61■□□□□ 0.41
CTSA-210ENST00000606000 CDK12Q9NYV4 1490 aaPredicted RBP17.61■□□□□ 0.41
CTSA-210ENST00000606000 PHRF1Q9P1Y6 1649 aaKnown RBP17.61■□□□□ 0.41
CTSA-210ENST00000606000 PPIP5K1Q6PFW1 1433 aa17.6■□□□□ 0.41
CTSA-210ENST00000606000 SLIT2O94813 1529 aa17.6■□□□□ 0.41
CTSA-210ENST00000606000 POLR3AO14802 1390 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms