RNA–Protein interactions for RNA: ENST00000604609.2

GDF15-205, Transcript of growth differentiation factor 15, humanhuman

TSL 3

Gene GDF15, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-205ENST00000604609 ADGRL3Q9HAR2 1447 aa13.97□□□□□ -0.17
GDF15-205ENST00000604609 TESK2Q96S53 571 aa13.96□□□□□ -0.17
GDF15-205ENST00000604609 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.95□□□□□ -0.18
GDF15-205ENST00000604609 KNDC1Q76NI1 1749 aa13.94□□□□□ -0.18
GDF15-205ENST00000604609 PRR36Q9H6K5 1346 aa13.93□□□□□ -0.18
GDF15-205ENST00000604609 ARHGEF28Q8N1W1 1705 aaKnown RBP13.93□□□□□ -0.18
GDF15-205ENST00000604609 C19orf44Q9H6X5 657 aa13.93□□□□□ -0.18
GDF15-205ENST00000604609 MSH6P52701 1360 aa13.93□□□□□ -0.18
GDF15-205ENST00000604609 CABP2Q9NPB3 220 aa13.92□□□□□ -0.18
GDF15-205ENST00000604609 DISP3Q9P2K9 1392 aa13.92□□□□□ -0.18
GDF15-205ENST00000604609 NALCNQ8IZF0 1738 aa13.92□□□□□ -0.18
GDF15-205ENST00000604609 TULP4Q9NRJ4 1543 aa13.91□□□□□ -0.18
GDF15-205ENST00000604609 C11orf95C9JLR9 678 aaPredicted RBP13.91□□□□□ -0.18
GDF15-205ENST00000604609 UBAP1LF5GYI3 381 aa13.91□□□□□ -0.18
GDF15-205ENST00000604609 CDK19Q9BWU1 502 aa13.91□□□□□ -0.18
GDF15-205ENST00000604609 XIRP1Q702N8 1843 aaKnown RBP13.91□□□□□ -0.18
GDF15-205ENST00000604609 EIF3AQ14152 1382 aaKnown RBP13.91□□□□□ -0.18
GDF15-205ENST00000604609 MST1RQ04912 1400 aa13.9□□□□□ -0.18
GDF15-205ENST00000604609 WASLO00401 505 aaPredicted RBP13.9□□□□□ -0.18
GDF15-205ENST00000604609 ZEB1P37275 1124 aaPredicted RBP13.9□□□□□ -0.18
GDF15-205ENST00000604609 EIF4G2P78344 907 aaKnown RBP eCLIP13.9□□□□□ -0.18
GDF15-205ENST00000604609 PIP4K2BP78356 416 aa13.9□□□□□ -0.18
GDF15-205ENST00000604609 NCOA3Q9Y6Q9 1424 aa13.9□□□□□ -0.19
GDF15-205ENST00000604609 ATF3P18847 181 aa13.89□□□□□ -0.19
GDF15-205ENST00000604609 DDX17Q92841 729 aaKnown RBP13.89□□□□□ -0.19
GDF15-205ENST00000604609 ORAI2Q96SN7 254 aa13.89□□□□□ -0.19
GDF15-205ENST00000604609 SRPK2P78362 688 aaKnown RBP13.87□□□□□ -0.19
GDF15-205ENST00000604609 SLAIN2Q9P270 581 aa13.87□□□□□ -0.19
GDF15-205ENST00000604609 CDC42BPGQ6DT37 1551 aa13.87□□□□□ -0.19
GDF15-205ENST00000604609 SCAF1Q9H7N4 1312 aaKnown RBP13.87□□□□□ -0.19
GDF15-205ENST00000604609 C1orf167Q5SNV9 1468 aa13.87□□□□□ -0.19
GDF15-205ENST00000604609 CADPS2Q86UW7 1296 aa13.86□□□□□ -0.19
GDF15-205ENST00000604609 ADGRB2O60241 1585 aa13.86□□□□□ -0.19
GDF15-205ENST00000604609 QRICH2Q9H0J4 1663 aa13.85□□□□□ -0.19
GDF15-205ENST00000604609 SBNO2Q9Y2G9 1366 aa13.85□□□□□ -0.19
GDF15-205ENST00000604609 DCCP43146 1447 aa13.85□□□□□ -0.19
GDF15-205ENST00000604609 BRINP3Q76B58 766 aa13.85□□□□□ -0.19
GDF15-205ENST00000604609 NUDT16Q96DE0 195 aaKnown RBP13.85□□□□□ -0.19
GDF15-205ENST00000604609 ATP7BP35670 1465 aa13.85□□□□□ -0.19
GDF15-205ENST00000604609 XPCQ01831 940 aaPredicted RBP13.84□□□□□ -0.19
GDF15-205ENST00000604609 ESCO1Q5FWF5 840 aa13.84□□□□□ -0.19
GDF15-205ENST00000604609 PMFBP1Q8TBY8 1022 aa13.84□□□□□ -0.19
GDF15-205ENST00000604609 POLR3GLQ9BT43 218 aa13.84□□□□□ -0.19
GDF15-205ENST00000604609 IQSEC2Q5JU85 1478 aa13.84□□□□□ -0.19
GDF15-205ENST00000604609 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
GDF15-205ENST00000604609 TOM1O60784 492 aa13.83□□□□□ -0.2
GDF15-205ENST00000604609 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
GDF15-205ENST00000604609 TMF1P82094 1093 aa13.81□□□□□ -0.2
GDF15-205ENST00000604609 CABP1Q9NZU7 370 aa13.81□□□□□ -0.2
GDF15-205ENST00000604609 SLC12A5Q9H2X9 1139 aa13.8□□□□□ -0.2
GDF15-205ENST00000604609 PHF8Q9UPP1 1060 aa13.8□□□□□ -0.2
GDF15-205ENST00000604609 FMN2Q9NZ56 1722 aa13.8□□□□□ -0.2
GDF15-205ENST00000604609 KIF7Q2M1P5 1343 aa13.8□□□□□ -0.2
GDF15-205ENST00000604609 FOXO3O43524 673 aa13.79□□□□□ -0.2
GDF15-205ENST00000604609 WASHC2AQ641Q2 1341 aa13.79□□□□□ -0.2
GDF15-205ENST00000604609 PPIP5K1Q6PFW1 1433 aa13.79□□□□□ -0.2
GDF15-205ENST00000604609 ANKARQ7Z5J8 1434 aa13.79□□□□□ -0.2
GDF15-205ENST00000604609 TMC1Q8TDI8 760 aa13.78□□□□□ -0.2
GDF15-205ENST00000604609 CCDC61Q9Y6R9 512 aa13.78□□□□□ -0.2
GDF15-205ENST00000604609 HSPA1LP34931 641 aa13.77□□□□□ -0.21
GDF15-205ENST00000604609 ACEP12821 1306 aa13.76□□□□□ -0.21
GDF15-205ENST00000604609 CD163L1Q9NR16 1453 aa13.75□□□□□ -0.21
GDF15-205ENST00000604609 ATAD2Q6PL18 1390 aa13.75□□□□□ -0.21
GDF15-205ENST00000604609 CCDC7Q96M83 1385 aa13.75□□□□□ -0.21
GDF15-205ENST00000604609 PLEKHG3A1L390 1219 aa13.75□□□□□ -0.21
GDF15-205ENST00000604609 ROBO1Q9Y6N7 1651 aa13.75□□□□□ -0.21
GDF15-205ENST00000604609 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
GDF15-205ENST00000604609 NGDNQ8NEJ9 315 aaKnown RBP13.74□□□□□ -0.21
GDF15-205ENST00000604609 A0A1W2PP64 1363 aa13.72□□□□□ -0.21
GDF15-205ENST00000604609 POLR3AO14802 1390 aaPredicted RBP13.72□□□□□ -0.21
GDF15-205ENST00000604609 KRT28Q7Z3Y7 464 aa13.72□□□□□ -0.21
GDF15-205ENST00000604609 CARD14Q9BXL6 1004 aa13.72□□□□□ -0.21
GDF15-205ENST00000604609 PXDNQ92626 1479 aa13.72□□□□□ -0.21
GDF15-205ENST00000604609 TOPAZ1Q8N9V7 1692 aa13.72□□□□□ -0.21
GDF15-205ENST00000604609 SOS2Q07890 1332 aaPredicted RBP13.71□□□□□ -0.21
GDF15-205ENST00000604609 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
GDF15-205ENST00000604609 PSME1Q06323 249 aa13.7□□□□□ -0.22
GDF15-205ENST00000604609 NUTM2GQ5VZR2 741 aa13.7□□□□□ -0.22
GDF15-205ENST00000604609 PUS7Q96PZ0 661 aaKnown RBP13.7□□□□□ -0.22
GDF15-205ENST00000604609 CPSF1Q10570 1443 aaKnown RBP13.7□□□□□ -0.22
GDF15-205ENST00000604609 NPHP3Q7Z494 1330 aa13.69□□□□□ -0.22
GDF15-205ENST00000604609 CDCA8Q53HL2 280 aa13.69□□□□□ -0.22
GDF15-205ENST00000604609 ILDR2Q71H61 639 aa13.69□□□□□ -0.22
GDF15-205ENST00000604609 PANK3Q9H999 370 aa13.69□□□□□ -0.22
GDF15-205ENST00000604609 RGPD8O14715 1765 aaPredicted RBP13.68□□□□□ -0.22
GDF15-205ENST00000604609 USP6P35125 1406 aa13.68□□□□□ -0.22
GDF15-205ENST00000604609 SSH2Q76I76 1423 aa13.68□□□□□ -0.22
GDF15-205ENST00000604609 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
GDF15-205ENST00000604609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.68□□□□□ -0.22
GDF15-205ENST00000604609 AHDC1Q5TGY3 1603 aaPredicted RBP13.68□□□□□ -0.22
GDF15-205ENST00000604609 LMOD2Q6P5Q4 547 aa13.67□□□□□ -0.22
GDF15-205ENST00000604609 NME9Q86XW9 330 aa13.67□□□□□ -0.22
GDF15-205ENST00000604609 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
GDF15-205ENST00000604609 ANKRD36BQ8N2N9 1353 aa13.67□□□□□ -0.22
GDF15-205ENST00000604609 SPATA31A3Q5VYP0 1347 aa13.66□□□□□ -0.22
GDF15-205ENST00000604609 TTC21BQ7Z4L5 1316 aa13.66□□□□□ -0.22
GDF15-205ENST00000604609 MYOM1P52179 1685 aa13.66□□□□□ -0.22
GDF15-205ENST00000604609 COL16A1Q07092 1604 aaPredicted RBP13.66□□□□□ -0.22
GDF15-205ENST00000604609 ZNF316A6NFI3 1004 aaPredicted RBP13.66□□□□□ -0.22
GDF15-205ENST00000604609 SLC24A1O60721 1099 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms