RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 CDK12Q9NYV4 1490 aaPredicted RBP30■■■□□ 2.39
GRAMD1A-214ENST00000603907 MST1RQ04912 1400 aa29.99■■■□□ 2.39
GRAMD1A-214ENST00000603907 TIMELESSQ9UNS1 1208 aa29.98■■■□□ 2.39
GRAMD1A-214ENST00000603907 KDM2AQ9Y2K7 1162 aa29.98■■■□□ 2.39
GRAMD1A-214ENST00000603907 AFF2P51816 1311 aa29.97■■■□□ 2.39
GRAMD1A-214ENST00000603907 LRRC59Q96AG4 307 aaKnown RBP29.97■■■□□ 2.39
GRAMD1A-214ENST00000603907 C14orf93Q9H972 538 aaKnown RBP29.93■■■□□ 2.38
GRAMD1A-214ENST00000603907 METP08581 1390 aa29.92■■■□□ 2.38
GRAMD1A-214ENST00000603907 ADGRL3Q9HAR2 1447 aa29.92■■■□□ 2.38
GRAMD1A-214ENST00000603907 LAMC1P11047 1609 aa29.92■■■□□ 2.38
GRAMD1A-214ENST00000603907 PRAG1Q86YV5 1406 aa29.89■■■□□ 2.38
GRAMD1A-214ENST00000603907 NALCNQ8IZF0 1738 aa29.88■■■□□ 2.37
GRAMD1A-214ENST00000603907 C8orf37Q96NL8 207 aa29.87■■■□□ 2.37
GRAMD1A-214ENST00000603907 PNPLA6Q8IY17 1366 aa29.87■■■□□ 2.37
GRAMD1A-214ENST00000603907 CFAP70Q5T0N1 1121 aa29.85■■■□□ 2.37
GRAMD1A-214ENST00000603907 QTRT2Q9H974 415 aaKnown RBP29.84■■■□□ 2.37
GRAMD1A-214ENST00000603907 RBM6P78332 1123 aaKnown RBP29.83■■■□□ 2.37
GRAMD1A-214ENST00000603907 KIAA1210Q9ULL0 1709 aa29.82■■■□□ 2.36
GRAMD1A-214ENST00000603907 DDX17Q92841 729 aaKnown RBP29.82■■■□□ 2.36
GRAMD1A-214ENST00000603907 RGS12O14924 1447 aa29.81■■■□□ 2.36
GRAMD1A-214ENST00000603907 C1orf167Q5SNV9 1468 aa29.79■■■□□ 2.36
GRAMD1A-214ENST00000603907 LRPPRCP42704 1394 aaKnown RBP29.77■■■□□ 2.36
GRAMD1A-214ENST00000603907 NGLY1Q96IV0 654 aa29.77■■■□□ 2.36
GRAMD1A-214ENST00000603907 ADGRB1O14514 1584 aa29.76■■■□□ 2.35
GRAMD1A-214ENST00000603907 ADAMTS2O95450 1211 aa29.75■■■□□ 2.35
GRAMD1A-214ENST00000603907 PTCH1Q13635 1447 aa29.75■■■□□ 2.35
GRAMD1A-214ENST00000603907 TMEM132EQ6IEE7 984 aa29.75■■■□□ 2.35
GRAMD1A-214ENST00000603907 YTHDC2Q9H6S0 1430 aaKnown RBP29.75■■■□□ 2.35
GRAMD1A-214ENST00000603907 ABCC11Q96J66 1382 aa29.75■■■□□ 2.35
GRAMD1A-214ENST00000603907 TECPR2O15040 1411 aa29.74■■■□□ 2.35
GRAMD1A-214ENST00000603907 NBPF8Q3BBV2 869 aa29.72■■■□□ 2.35
GRAMD1A-214ENST00000603907 TRPM1Q7Z4N2 1603 aa29.71■■■□□ 2.35
GRAMD1A-214ENST00000603907 SIRT1Q96EB6 747 aa29.7■■■□□ 2.35
GRAMD1A-214ENST00000603907 KNDC1Q76NI1 1749 aa29.7■■■□□ 2.34
GRAMD1A-214ENST00000603907 SOS2Q07890 1332 aaPredicted RBP29.7■■■□□ 2.34
GRAMD1A-214ENST00000603907 ATAD2Q6PL18 1390 aa29.67■■■□□ 2.34
GRAMD1A-214ENST00000603907 ROBO2Q9HCK4 1378 aa29.67■■■□□ 2.34
GRAMD1A-214ENST00000603907 ORAI2Q96SN7 254 aa29.67■■■□□ 2.34
GRAMD1A-214ENST00000603907 RALGAPBQ86X10 1494 aa29.67■■■□□ 2.34
GRAMD1A-214ENST00000603907 NBPF1Q3BBV0 1214 aa29.66■■■□□ 2.34
GRAMD1A-214ENST00000603907 STK26Q9P289 416 aa29.66■■■□□ 2.34
GRAMD1A-214ENST00000603907 USP21Q9UK80 565 aa29.66■■■□□ 2.34
GRAMD1A-214ENST00000603907 DLC1Q96QB1 1528 aa29.66■■■□□ 2.34
GRAMD1A-214ENST00000603907 ROCK2O75116 1388 aaKnown RBP29.65■■■□□ 2.34
GRAMD1A-214ENST00000603907 GPRASP1Q5JY77 1395 aa29.65■■■□□ 2.34
GRAMD1A-214ENST00000603907 TRPC5Q9UL62 973 aaPredicted RBP29.65■■■□□ 2.34
GRAMD1A-214ENST00000603907 COL22A1Q8NFW1 1626 aaPredicted RBP29.63■■■□□ 2.33
GRAMD1A-214ENST00000603907 FNBP4Q8N3X1 1017 aaPredicted RBP29.59■■■□□ 2.33
GRAMD1A-214ENST00000603907 TRAK1Q9UPV9 953 aa29.59■■■□□ 2.33
GRAMD1A-214ENST00000603907 NPHP3Q7Z494 1330 aa29.57■■■□□ 2.32
GRAMD1A-214ENST00000603907 ATRNO75882 1429 aa29.56■■■□□ 2.32
GRAMD1A-214ENST00000603907 CDC42BPGQ6DT37 1551 aa29.56■■■□□ 2.32
GRAMD1A-214ENST00000603907 CARD11Q9BXL7 1154 aa29.55■■■□□ 2.32
GRAMD1A-214ENST00000603907 MARF1Q9Y4F3 1742 aaKnown RBP29.54■■■□□ 2.32
GRAMD1A-214ENST00000603907 ESCO1Q5FWF5 840 aa29.53■■■□□ 2.32
GRAMD1A-214ENST00000603907 WAPLQ7Z5K2 1190 aa29.53■■■□□ 2.32
GRAMD1A-214ENST00000603907 PRAM1Q96QH2 718 aa29.53■■■□□ 2.32
GRAMD1A-214ENST00000603907 POGKQ9P215 609 aa29.53■■■□□ 2.32
GRAMD1A-214ENST00000603907 EIF3AQ14152 1382 aaKnown RBP29.52■■■□□ 2.32
GRAMD1A-214ENST00000603907 ARHGEF28Q8N1W1 1705 aaKnown RBP29.51■■■□□ 2.32
GRAMD1A-214ENST00000603907 PLEKHH1Q9ULM0 1364 aa29.5■■■□□ 2.31
GRAMD1A-214ENST00000603907 PXDNQ92626 1479 aa29.49■■■□□ 2.31
GRAMD1A-214ENST00000603907 ZRANB1Q9UGI0 708 aa29.48■■■□□ 2.31
GRAMD1A-214ENST00000603907 CCDC125Q86Z20 511 aa29.46■■■□□ 2.31
GRAMD1A-214ENST00000603907 BCL9LQ86UU0 1499 aa29.45■■■□□ 2.31
GRAMD1A-214ENST00000603907 FOXO3O43524 673 aa29.45■■■□□ 2.31
GRAMD1A-214ENST00000603907 CENPJQ9HC77 1338 aaPredicted RBP29.45■■■□□ 2.3
GRAMD1A-214ENST00000603907 XPCQ01831 940 aaPredicted RBP29.42■■■□□ 2.3
GRAMD1A-214ENST00000603907 SAFB2Q14151 953 aaKnown RBP eCLIP29.41■■■□□ 2.3
GRAMD1A-214ENST00000603907 GJD4Q96KN9 370 aaPredicted RBP29.41■■■□□ 2.3
GRAMD1A-214ENST00000603907 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.41■■■□□ 2.3
GRAMD1A-214ENST00000603907 ADGRB2O60241 1585 aa29.4■■■□□ 2.3
GRAMD1A-214ENST00000603907 NUTM2FA1L443 756 aa29.38■■■□□ 2.29
GRAMD1A-214ENST00000603907 ZEB1P37275 1124 aaPredicted RBP29.38■■■□□ 2.29
GRAMD1A-214ENST00000603907 KIF1AQ12756 1690 aa29.37■■■□□ 2.29
GRAMD1A-214ENST00000603907 USP47Q96K76 1375 aa29.37■■■□□ 2.29
GRAMD1A-214ENST00000603907 MINK1Q8N4C8 1332 aaPredicted RBP29.36■■■□□ 2.29
GRAMD1A-214ENST00000603907 SBNO2Q9Y2G9 1366 aa29.36■■■□□ 2.29
GRAMD1A-214ENST00000603907 FMN2Q9NZ56 1722 aa29.34■■■□□ 2.29
GRAMD1A-214ENST00000603907 SLC24A1O60721 1099 aa29.34■■■□□ 2.29
GRAMD1A-214ENST00000603907 QRICH2Q9H0J4 1663 aa29.34■■■□□ 2.29
GRAMD1A-214ENST00000603907 EP400Q96L91 3159 aa29.33■■■□□ 2.29
GRAMD1A-214ENST00000603907 UNC5CLQ8IV45 518 aa29.33■■■□□ 2.29
GRAMD1A-214ENST00000603907 SPATA31A3Q5VYP0 1347 aa29.32■■■□□ 2.28
GRAMD1A-214ENST00000603907 SLIT2O94813 1529 aa29.31■■■□□ 2.28
GRAMD1A-214ENST00000603907 WASLO00401 505 aaPredicted RBP29.31■■■□□ 2.28
GRAMD1A-214ENST00000603907 SRCAPQ6ZRS2 3230 aa29.3■■■□□ 2.28
GRAMD1A-214ENST00000603907 HIRIP3Q9BW71 556 aaPredicted RBP29.3■■■□□ 2.28
GRAMD1A-214ENST00000603907 GLI3P10071 1580 aa29.3■■■□□ 2.28
GRAMD1A-214ENST00000603907 USP32Q8NFA0 1604 aa29.29■■■□□ 2.28
GRAMD1A-214ENST00000603907 ST20-MTHFSA0A0A6YYL1 179 aa29.28■■■□□ 2.28
GRAMD1A-214ENST00000603907 BLMP54132 1417 aaPredicted RBP29.28■■■□□ 2.28
GRAMD1A-214ENST00000603907 HAP1P54257 671 aaPredicted RBP29.27■■■□□ 2.28
GRAMD1A-214ENST00000603907 EIF4G2P78344 907 aaKnown RBP eCLIP29.27■■■□□ 2.28
GRAMD1A-214ENST00000603907 ANKARQ7Z5J8 1434 aa29.27■■■□□ 2.28
GRAMD1A-214ENST00000603907 KRT28Q7Z3Y7 464 aa29.26■■■□□ 2.27
GRAMD1A-214ENST00000603907 EVC2Q86UK5 1308 aa29.25■■■□□ 2.27
GRAMD1A-214ENST00000603907 BRWD3Q6RI45 1802 aa29.24■■■□□ 2.27
GRAMD1A-214ENST00000603907 TULP4Q9NRJ4 1543 aa29.24■■■□□ 2.27
GRAMD1A-214ENST00000603907 PSME1Q06323 249 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms