RNA–Protein interactions for RNA: ENST00000602837.1

UBE2E3-211, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-211ENST00000602837 NPDC1Q9NQX5 325 aaPredicted RBP11.04□□□□□ -0.64
UBE2E3-211ENST00000602837 MINK1Q8N4C8 1332 aaPredicted RBP11.04□□□□□ -0.64
UBE2E3-211ENST00000602837 FRMPD1Q5SYB0 1578 aa11.03□□□□□ -0.64
UBE2E3-211ENST00000602837 MYOM3Q5VTT5 1437 aa11.03□□□□□ -0.64
UBE2E3-211ENST00000602837 FOSBP53539 338 aa11.03□□□□□ -0.64
UBE2E3-211ENST00000602837 PDE4DQ08499 809 aa11.03□□□□□ -0.64
UBE2E3-211ENST00000602837 TYW1BQ6NUM6 668 aa11.03□□□□□ -0.64
UBE2E3-211ENST00000602837 RICTORQ6R327 1708 aa11.03□□□□□ -0.64
UBE2E3-211ENST00000602837 ABCC1P33527 1531 aa11.03□□□□□ -0.64
UBE2E3-211ENST00000602837 PLEKHH2Q8IVE3 1493 aa11.02□□□□□ -0.65
UBE2E3-211ENST00000602837 ZNF454Q8N9F8 522 aa11.02□□□□□ -0.65
UBE2E3-211ENST00000602837 SYCP2Q9BX26 1530 aa11.02□□□□□ -0.65
UBE2E3-211ENST00000602837 ARID4BQ4LE39 1312 aaPredicted RBP11.02□□□□□ -0.65
UBE2E3-211ENST00000602837 CAMSAP2Q08AD1 1489 aa11.01□□□□□ -0.65
UBE2E3-211ENST00000602837 ZNF518AQ6AHZ1 1483 aa11.01□□□□□ -0.65
UBE2E3-211ENST00000602837 FAM50AQ14320 339 aaKnown RBP11.01□□□□□ -0.65
UBE2E3-211ENST00000602837 ZNF710Q8N1W2 664 aa11.01□□□□□ -0.65
UBE2E3-211ENST00000602837 SPAG9O60271 1321 aaKnown RBP11.01□□□□□ -0.65
UBE2E3-211ENST00000602837 YEATS2Q9ULM3 1422 aa11.01□□□□□ -0.65
UBE2E3-211ENST00000602837 KIAA1107Q9UPP5 1409 aa11.01□□□□□ -0.65
UBE2E3-211ENST00000602837 RIMBP2O15034 1052 aa11□□□□□ -0.65
UBE2E3-211ENST00000602837 FBXW7Q969H0 707 aa10.99□□□□□ -0.65
UBE2E3-211ENST00000602837 ZSWIM6Q9HCJ5 1215 aa10.99□□□□□ -0.65
UBE2E3-211ENST00000602837 MIA2Q96PC5 1412 aa10.99□□□□□ -0.65
UBE2E3-211ENST00000602837 ZFYVE16Q7Z3T8 1539 aa10.99□□□□□ -0.65
UBE2E3-211ENST00000602837 TSPY4P0CV99 314 aa10.98□□□□□ -0.65
UBE2E3-211ENST00000602837 TSPY10P0CW01 314 aa10.98□□□□□ -0.65
UBE2E3-211ENST00000602837 KDM4CQ9H3R0 1056 aa10.98□□□□□ -0.65
UBE2E3-211ENST00000602837 LHX6Q9UPM6 363 aa10.98□□□□□ -0.65
UBE2E3-211ENST00000602837 FGD6Q6ZV73 1430 aa10.98□□□□□ -0.65
UBE2E3-211ENST00000602837 MBD5Q9P267 1494 aa10.98□□□□□ -0.65
UBE2E3-211ENST00000602837 ZMYM4Q5VZL5 1548 aa10.98□□□□□ -0.65
UBE2E3-211ENST00000602837 MLECQ14165 292 aa10.97□□□□□ -0.65
UBE2E3-211ENST00000602837 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
UBE2E3-211ENST00000602837 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
UBE2E3-211ENST00000602837 ADAM33Q9BZ11 813 aa10.97□□□□□ -0.65
UBE2E3-211ENST00000602837 GTF3C3Q9Y5Q9 886 aa10.97□□□□□ -0.65
UBE2E3-211ENST00000602837 MAGI2Q86UL8 1455 aa10.97□□□□□ -0.65
UBE2E3-211ENST00000602837 PTPN23Q9H3S7 1636 aa10.96□□□□□ -0.65
UBE2E3-211ENST00000602837 KDM5CP41229 1560 aa10.96□□□□□ -0.65
UBE2E3-211ENST00000602837 ATP10AO60312 1499 aa10.96□□□□□ -0.65
UBE2E3-211ENST00000602837 C6orf132Q5T0Z8 1188 aa10.96□□□□□ -0.65
UBE2E3-211ENST00000602837 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
UBE2E3-211ENST00000602837 HECW2Q9P2P5 1572 aa10.95□□□□□ -0.66
UBE2E3-211ENST00000602837 ARHGEF40Q8TER5 1519 aa10.95□□□□□ -0.66
UBE2E3-211ENST00000602837 MLH3Q9UHC1 1453 aa10.95□□□□□ -0.66
UBE2E3-211ENST00000602837 ITGAEP38570 1179 aa10.95□□□□□ -0.66
UBE2E3-211ENST00000602837 CHIC2Q9UKJ5 165 aa10.95□□□□□ -0.66
UBE2E3-211ENST00000602837 CCDC141Q6ZP82 1450 aa10.94□□□□□ -0.66
UBE2E3-211ENST00000602837 IL27Q8NEV9 243 aa10.94□□□□□ -0.66
UBE2E3-211ENST00000602837 FAM161AQ3B820 660 aa10.93□□□□□ -0.66
UBE2E3-211ENST00000602837 ATP7AQ04656 1500 aa10.93□□□□□ -0.66
UBE2E3-211ENST00000602837 TCOF1Q13428 1488 aaKnown RBP10.93□□□□□ -0.66
UBE2E3-211ENST00000602837 KIDINS220Q9ULH0 1771 aa10.93□□□□□ -0.66
UBE2E3-211ENST00000602837 C9orf84Q5VXU9 1444 aa10.92□□□□□ -0.66
UBE2E3-211ENST00000602837 ARHGEF5Q12774 1597 aa10.92□□□□□ -0.66
UBE2E3-211ENST00000602837 DIP2CQ9Y2E4 1556 aa10.92□□□□□ -0.66
UBE2E3-211ENST00000602837 AMHR2Q16671 573 aa10.92□□□□□ -0.66
UBE2E3-211ENST00000602837 PARP9Q8IXQ6 854 aa10.92□□□□□ -0.66
UBE2E3-211ENST00000602837 ABCC5O15440 1437 aa10.92□□□□□ -0.66
UBE2E3-211ENST00000602837 ABCA6Q8N139 1617 aa10.91□□□□□ -0.66
UBE2E3-211ENST00000602837 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
UBE2E3-211ENST00000602837 RTEL1-TNFRSF6BF6WH68 1400 aa10.91□□□□□ -0.66
UBE2E3-211ENST00000602837 PADI6Q6TGC4 694 aa10.9□□□□□ -0.66
UBE2E3-211ENST00000602837 DAPK1P53355 1430 aa10.9□□□□□ -0.66
UBE2E3-211ENST00000602837 INO80Q9ULG1 1556 aaPredicted RBP10.9□□□□□ -0.67
UBE2E3-211ENST00000602837 A2MP01023 1474 aa10.89□□□□□ -0.67
UBE2E3-211ENST00000602837 SNPHO15079 494 aa10.89□□□□□ -0.67
UBE2E3-211ENST00000602837 HOXB1P14653 301 aaPredicted RBP10.89□□□□□ -0.67
UBE2E3-211ENST00000602837 PHOX2BQ99453 314 aa10.89□□□□□ -0.67
UBE2E3-211ENST00000602837 FAM117AQ9C073 453 aa10.89□□□□□ -0.67
UBE2E3-211ENST00000602837 SIGLEC1Q9BZZ2 1709 aa10.89□□□□□ -0.67
UBE2E3-211ENST00000602837 PPP4R3BQ5MIZ7 849 aa10.88□□□□□ -0.67
UBE2E3-211ENST00000602837 GGT6Q6P531 493 aa10.88□□□□□ -0.67
UBE2E3-211ENST00000602837 KIF3BO15066 747 aa10.87□□□□□ -0.67
UBE2E3-211ENST00000602837 COL9A1P20849 921 aa10.87□□□□□ -0.67
UBE2E3-211ENST00000602837 TTLL12Q14166 644 aaPredicted RBP10.87□□□□□ -0.67
UBE2E3-211ENST00000602837 REPIN1Q9BWE0 567 aaKnown RBP10.87□□□□□ -0.67
UBE2E3-211ENST00000602837 ESF1Q9H501 851 aaKnown RBP10.87□□□□□ -0.67
UBE2E3-211ENST00000602837 DHX29Q7Z478 1369 aaKnown RBP10.87□□□□□ -0.67
UBE2E3-211ENST00000602837 DNMT1P26358 1616 aaKnown RBP10.87□□□□□ -0.67
UBE2E3-211ENST00000602837 LHX8Q68G74 356 aa10.86□□□□□ -0.67
UBE2E3-211ENST00000602837 CERKQ8TCT0 537 aa10.86□□□□□ -0.67
UBE2E3-211ENST00000602837 BCORL1Q5H9F3 1711 aa10.86□□□□□ -0.67
UBE2E3-211ENST00000602837 MAST1Q9Y2H9 1570 aa10.86□□□□□ -0.67
UBE2E3-211ENST00000602837 NLRP7Q8WX94 980 aa10.85□□□□□ -0.67
UBE2E3-211ENST00000602837 ANKRD30AQ9BXX3 1397 aa10.85□□□□□ -0.67
UBE2E3-211ENST00000602837 KIF15Q9NS87 1388 aa10.85□□□□□ -0.67
UBE2E3-211ENST00000602837 ADGBQ8N7X0 1667 aa10.85□□□□□ -0.67
UBE2E3-211ENST00000602837 PTPRKQ15262 1439 aa10.84□□□□□ -0.67
UBE2E3-211ENST00000602837 RRBP1Q9P2E9 1410 aaKnown RBP10.84□□□□□ -0.67
UBE2E3-211ENST00000602837 CDCA7LQ96GN5 454 aa10.84□□□□□ -0.67
UBE2E3-211ENST00000602837 SHANK2Q9UPX8 1470 aa10.84□□□□□ -0.67
UBE2E3-211ENST00000602837 REREQ9P2R6 1566 aa10.84□□□□□ -0.67
UBE2E3-211ENST00000602837 CROCC2H7BZ55 1655 aa10.84□□□□□ -0.67
UBE2E3-211ENST00000602837 ADAMTSL3P82987 1691 aa10.83□□□□□ -0.68
UBE2E3-211ENST00000602837 PRSS12P56730 875 aa10.83□□□□□ -0.68
UBE2E3-211ENST00000602837 GIGYF2Q6Y7W6 1299 aaKnown RBP10.83□□□□□ -0.68
UBE2E3-211ENST00000602837 TTC13Q8NBP0 860 aa10.83□□□□□ -0.68
UBE2E3-211ENST00000602837 BCL2L12Q9HB09 334 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms