RNA–Protein interactions for RNA: ENST00000601399.3

AC090004.1-202, humanhuman

TSL 5

Gene AC090004.1, Length 787 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090004.1-202ENST00000601399 TRAK1Q9UPV9 953 aa16■□□□□ 0.15
AC090004.1-202ENST00000601399 NBPF1Q3BBV0 1214 aa15.99■□□□□ 0.15
AC090004.1-202ENST00000601399 PRAM1Q96QH2 718 aa15.99■□□□□ 0.15
AC090004.1-202ENST00000601399 ARHGEF28Q8N1W1 1705 aaKnown RBP15.99■□□□□ 0.15
AC090004.1-202ENST00000601399 CDC42BPGQ6DT37 1551 aa15.97■□□□□ 0.15
AC090004.1-202ENST00000601399 NBPF8Q3BBV2 869 aa15.97■□□□□ 0.15
AC090004.1-202ENST00000601399 ROCK2O75116 1388 aaKnown RBP15.97■□□□□ 0.15
AC090004.1-202ENST00000601399 PLEKHH1Q9ULM0 1364 aa15.97■□□□□ 0.15
AC090004.1-202ENST00000601399 ROBO1Q9Y6N7 1651 aa15.96■□□□□ 0.15
AC090004.1-202ENST00000601399 RALGAPBQ86X10 1494 aa15.94■□□□□ 0.14
AC090004.1-202ENST00000601399 MST1RQ04912 1400 aa15.94■□□□□ 0.14
AC090004.1-202ENST00000601399 GPRASP1Q5JY77 1395 aa15.93■□□□□ 0.14
AC090004.1-202ENST00000601399 SAFB2Q14151 953 aaKnown RBP eCLIP15.93■□□□□ 0.14
AC090004.1-202ENST00000601399 FMN2Q9NZ56 1722 aa15.93■□□□□ 0.14
AC090004.1-202ENST00000601399 ADGRB2O60241 1585 aa15.92■□□□□ 0.14
AC090004.1-202ENST00000601399 EIF3AQ14152 1382 aaKnown RBP15.91■□□□□ 0.14
AC090004.1-202ENST00000601399 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
AC090004.1-202ENST00000601399 CARD11Q9BXL7 1154 aa15.9■□□□□ 0.14
AC090004.1-202ENST00000601399 CENPJQ9HC77 1338 aaPredicted RBP15.9■□□□□ 0.14
AC090004.1-202ENST00000601399 QRICH2Q9H0J4 1663 aa15.89■□□□□ 0.13
AC090004.1-202ENST00000601399 HSPA1LP34931 641 aa15.89■□□□□ 0.13
AC090004.1-202ENST00000601399 MINK1Q8N4C8 1332 aaPredicted RBP15.89■□□□□ 0.13
AC090004.1-202ENST00000601399 PHLPP1O60346 1717 aa15.88■□□□□ 0.13
AC090004.1-202ENST00000601399 RGPD8O14715 1765 aaPredicted RBP15.88■□□□□ 0.13
AC090004.1-202ENST00000601399 BRINP3Q76B58 766 aa15.88■□□□□ 0.13
AC090004.1-202ENST00000601399 WASLO00401 505 aaPredicted RBP15.87■□□□□ 0.13
AC090004.1-202ENST00000601399 HIRIP3Q9BW71 556 aaPredicted RBP15.86■□□□□ 0.13
AC090004.1-202ENST00000601399 NHSL1Q5SYE7 1610 aa15.86■□□□□ 0.13
AC090004.1-202ENST00000601399 AHDC1Q5TGY3 1603 aaPredicted RBP15.86■□□□□ 0.13
AC090004.1-202ENST00000601399 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
AC090004.1-202ENST00000601399 ESCO1Q5FWF5 840 aa15.85■□□□□ 0.13
AC090004.1-202ENST00000601399 KIF1AQ12756 1690 aa15.84■□□□□ 0.13
AC090004.1-202ENST00000601399 NUTM2FA1L443 756 aa15.84■□□□□ 0.13
AC090004.1-202ENST00000601399 ORAI2Q96SN7 254 aa15.84■□□□□ 0.13
AC090004.1-202ENST00000601399 TULP4Q9NRJ4 1543 aa15.84■□□□□ 0.13
AC090004.1-202ENST00000601399 ITSN1Q15811 1721 aa15.83■□□□□ 0.13
AC090004.1-202ENST00000601399 USP32Q8NFA0 1604 aa15.83■□□□□ 0.12
AC090004.1-202ENST00000601399 CDK19Q9BWU1 502 aa15.82■□□□□ 0.12
AC090004.1-202ENST00000601399 SLC24A1O60721 1099 aa15.81■□□□□ 0.12
AC090004.1-202ENST00000601399 COL16A1Q07092 1604 aaPredicted RBP15.81■□□□□ 0.12
AC090004.1-202ENST00000601399 SBNO2Q9Y2G9 1366 aa15.8■□□□□ 0.12
AC090004.1-202ENST00000601399 EVC2Q86UK5 1308 aa15.8■□□□□ 0.12
AC090004.1-202ENST00000601399 PHF8Q9UPP1 1060 aa15.8■□□□□ 0.12
AC090004.1-202ENST00000601399 NPHP3Q7Z494 1330 aa15.79■□□□□ 0.12
AC090004.1-202ENST00000601399 NUDT16Q96DE0 195 aaKnown RBP15.79■□□□□ 0.12
AC090004.1-202ENST00000601399 SRPK2P78362 688 aaKnown RBP15.78■□□□□ 0.12
AC090004.1-202ENST00000601399 LRRC59Q96AG4 307 aaKnown RBP15.78■□□□□ 0.12
AC090004.1-202ENST00000601399 ATP7BP35670 1465 aa15.77■□□□□ 0.11
AC090004.1-202ENST00000601399 TOPAZ1Q8N9V7 1692 aa15.76■□□□□ 0.11
AC090004.1-202ENST00000601399 USP47Q96K76 1375 aa15.76■□□□□ 0.11
AC090004.1-202ENST00000601399 JCADQ9P266 1359 aa15.76■□□□□ 0.11
AC090004.1-202ENST00000601399 SOS2Q07890 1332 aaPredicted RBP15.76■□□□□ 0.11
AC090004.1-202ENST00000601399 PRR36Q9H6K5 1346 aa15.76■□□□□ 0.11
AC090004.1-202ENST00000601399 FOXO3O43524 673 aa15.76■□□□□ 0.11
AC090004.1-202ENST00000601399 CCDC61Q9Y6R9 512 aa15.76■□□□□ 0.11
AC090004.1-202ENST00000601399 SHPRHQ149N8 1683 aa15.76■□□□□ 0.11
AC090004.1-202ENST00000601399 ST20-MTHFSA0A0A6YYL1 179 aa15.75■□□□□ 0.11
AC090004.1-202ENST00000601399 PSME1Q06323 249 aa15.75■□□□□ 0.11
AC090004.1-202ENST00000601399 DDX17Q92841 729 aaKnown RBP15.75■□□□□ 0.11
AC090004.1-202ENST00000601399 PXDNQ92626 1479 aa15.74■□□□□ 0.11
AC090004.1-202ENST00000601399 PMFBP1Q8TBY8 1022 aa15.74■□□□□ 0.11
AC090004.1-202ENST00000601399 CABP2Q9NPB3 220 aa15.74■□□□□ 0.11
AC090004.1-202ENST00000601399 ZEB1P37275 1124 aaPredicted RBP15.73■□□□□ 0.11
AC090004.1-202ENST00000601399 KRT28Q7Z3Y7 464 aa15.73■□□□□ 0.11
AC090004.1-202ENST00000601399 NGDNQ8NEJ9 315 aaKnown RBP15.73■□□□□ 0.11
AC090004.1-202ENST00000601399 PLEKHG3A1L390 1219 aa15.72■□□□□ 0.11
AC090004.1-202ENST00000601399 PUS7Q96PZ0 661 aaKnown RBP15.72■□□□□ 0.11
AC090004.1-202ENST00000601399 TESK2Q96S53 571 aa15.72■□□□□ 0.11
AC090004.1-202ENST00000601399 PPIP5K1Q6PFW1 1433 aa15.71■□□□□ 0.11
AC090004.1-202ENST00000601399 ATAD2Q6PL18 1390 aa15.71■□□□□ 0.11
AC090004.1-202ENST00000601399 SPATA31A6Q5VVP1 1343 aa15.7■□□□□ 0.1
AC090004.1-202ENST00000601399 EIF4G2P78344 907 aaKnown RBP eCLIP15.7■□□□□ 0.1
AC090004.1-202ENST00000601399 POLR3AO14802 1390 aaPredicted RBP15.7■□□□□ 0.1
AC090004.1-202ENST00000601399 TMF1P82094 1093 aa15.69■□□□□ 0.1
AC090004.1-202ENST00000601399 XPCQ01831 940 aaPredicted RBP15.69■□□□□ 0.1
AC090004.1-202ENST00000601399 SBNO1A3KN83 1393 aa15.69■□□□□ 0.1
AC090004.1-202ENST00000601399 ACEP12821 1306 aa15.68■□□□□ 0.1
AC090004.1-202ENST00000601399 PNPLA6Q8IY17 1366 aa15.68■□□□□ 0.1
AC090004.1-202ENST00000601399 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
AC090004.1-202ENST00000601399 CABP1Q9NZU7 370 aa15.68■□□□□ 0.1
AC090004.1-202ENST00000601399 TRPM3Q9HCF6 1732 aaPredicted RBP15.68■□□□□ 0.1
AC090004.1-202ENST00000601399 COL22A1Q8NFW1 1626 aaPredicted RBP15.68■□□□□ 0.1
AC090004.1-202ENST00000601399 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
AC090004.1-202ENST00000601399 MED1Q15648 1581 aaPredicted RBP15.66■□□□□ 0.1
AC090004.1-202ENST00000601399 AKAP12Q02952 1782 aa15.66■□□□□ 0.1
AC090004.1-202ENST00000601399 TNS3Q68CZ2 1445 aa15.66■□□□□ 0.1
AC090004.1-202ENST00000601399 ARHGEF10O15013 1369 aa15.65■□□□□ 0.1
AC090004.1-202ENST00000601399 BRD4O60885 1362 aaPredicted RBP15.65■□□□□ 0.1
AC090004.1-202ENST00000601399 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
AC090004.1-202ENST00000601399 ALS2Q96Q42 1657 aa15.64■□□□□ 0.09
AC090004.1-202ENST00000601399 HSPA5P11021 654 aaKnown RBP15.64■□□□□ 0.09
AC090004.1-202ENST00000601399 NINLQ9Y2I6 1382 aa15.63■□□□□ 0.09
AC090004.1-202ENST00000601399 PAK3O75914 559 aaPredicted RBP15.63■□□□□ 0.09
AC090004.1-202ENST00000601399 DISP3Q9P2K9 1392 aa15.62■□□□□ 0.09
AC090004.1-202ENST00000601399 NUTM2BA6NNL0 878 aaPredicted RBP15.62■□□□□ 0.09
AC090004.1-202ENST00000601399 NUTM2EB1AL46 878 aaPredicted RBP15.62■□□□□ 0.09
AC090004.1-202ENST00000601399 LMOD2Q6P5Q4 547 aa15.62■□□□□ 0.09
AC090004.1-202ENST00000601399 NUTM2AQ8IVF1 878 aaPredicted RBP15.62■□□□□ 0.09
AC090004.1-202ENST00000601399 TMC1Q8TDI8 760 aa15.62■□□□□ 0.09
AC090004.1-202ENST00000601399 MEX3CQ5U5Q3 659 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms