RNA–Protein interactions for RNA: ENST00000599004.1

C19orf48-211, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 5

Gene C19orf48, Length 866 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-211ENST00000599004 CLTCL1P53675 1640 aa18.21■□□□□ 0.51
C19orf48-211ENST00000599004 NPHP3Q7Z494 1330 aa18.21■□□□□ 0.51
C19orf48-211ENST00000599004 KIF1BO60333 1816 aa18.19■□□□□ 0.5
C19orf48-211ENST00000599004 ITGAEP38570 1179 aa18.19■□□□□ 0.5
C19orf48-211ENST00000599004 BLMP54132 1417 aaPredicted RBP18.19■□□□□ 0.5
C19orf48-211ENST00000599004 ESCO1Q5FWF5 840 aa18.19■□□□□ 0.5
C19orf48-211ENST00000599004 HFM1A2PYH4 1435 aa18.17■□□□□ 0.5
C19orf48-211ENST00000599004 PRAG1Q86YV5 1406 aa18.17■□□□□ 0.5
C19orf48-211ENST00000599004 VGFO15240 615 aaPredicted RBP18.17■□□□□ 0.5
C19orf48-211ENST00000599004 PXDNQ92626 1479 aa18.17■□□□□ 0.5
C19orf48-211ENST00000599004 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.16■□□□□ 0.5
C19orf48-211ENST00000599004 XPCQ01831 940 aaPredicted RBP18.16■□□□□ 0.5
C19orf48-211ENST00000599004 FOXO3O43524 673 aa18.15■□□□□ 0.5
C19orf48-211ENST00000599004 DEFB132Q7Z7B7 95 aa18.15■□□□□ 0.5
C19orf48-211ENST00000599004 RALGAPBQ86X10 1494 aa18.14■□□□□ 0.5
C19orf48-211ENST00000599004 GLI3P10071 1580 aa18.14■□□□□ 0.49
C19orf48-211ENST00000599004 SF3B2Q13435 895 aaKnown RBP18.14■□□□□ 0.49
C19orf48-211ENST00000599004 UNC5CLQ8IV45 518 aa18.14■□□□□ 0.49
C19orf48-211ENST00000599004 CDC42BPGQ6DT37 1551 aa18.13■□□□□ 0.49
C19orf48-211ENST00000599004 LRPPRCP42704 1394 aaKnown RBP18.13■□□□□ 0.49
C19orf48-211ENST00000599004 LRP5O75197 1615 aa18.12■□□□□ 0.49
C19orf48-211ENST00000599004 BRWD3Q6RI45 1802 aa18.12■□□□□ 0.49
C19orf48-211ENST00000599004 SLIT2O94813 1529 aa18.11■□□□□ 0.49
C19orf48-211ENST00000599004 RPGRIP1LQ68CZ1 1315 aa18.08■□□□□ 0.49
C19orf48-211ENST00000599004 NUTM2FA1L443 756 aa18.08■□□□□ 0.48
C19orf48-211ENST00000599004 SEPT12Q8IYM1 358 aa18.08■□□□□ 0.48
C19orf48-211ENST00000599004 NAIPQ13075 1403 aa18.07■□□□□ 0.48
C19orf48-211ENST00000599004 USP32Q8NFA0 1604 aa18.06■□□□□ 0.48
C19orf48-211ENST00000599004 PPLO60437 1756 aa18.06■□□□□ 0.48
C19orf48-211ENST00000599004 SPATA31A3Q5VYP0 1347 aa18.05■□□□□ 0.48
C19orf48-211ENST00000599004 HAP1P54257 671 aaPredicted RBP18.04■□□□□ 0.48
C19orf48-211ENST00000599004 VPS72Q15906 364 aa18.04■□□□□ 0.48
C19orf48-211ENST00000599004 PSDA5PKW4 1024 aaPredicted RBP18.03■□□□□ 0.48
C19orf48-211ENST00000599004 KRT27Q7Z3Y8 459 aa18.03■□□□□ 0.48
C19orf48-211ENST00000599004 CCDC9Q9Y3X0 531 aaKnown RBP18.03■□□□□ 0.48
C19orf48-211ENST00000599004 CCDC144AA2RUR9 1427 aa18.03■□□□□ 0.48
C19orf48-211ENST00000599004 WAPLQ7Z5K2 1190 aa18.02■□□□□ 0.48
C19orf48-211ENST00000599004 STK26Q9P289 416 aa18.02■□□□□ 0.48
C19orf48-211ENST00000599004 KIF1AQ12756 1690 aa18.02■□□□□ 0.47
C19orf48-211ENST00000599004 ONECUT3O60422 494 aaPredicted RBP18.01■□□□□ 0.47
C19orf48-211ENST00000599004 HRCP23327 699 aa18.01■□□□□ 0.47
C19orf48-211ENST00000599004 BAG6P46379 1132 aa18.01■□□□□ 0.47
C19orf48-211ENST00000599004 KRT28Q7Z3Y7 464 aa18.01■□□□□ 0.47
C19orf48-211ENST00000599004 PLCH1Q4KWH8 1693 aa18■□□□□ 0.47
C19orf48-211ENST00000599004 NWD2Q9ULI1 1742 aa18■□□□□ 0.47
C19orf48-211ENST00000599004 TECPR2O15040 1411 aa17.99■□□□□ 0.47
C19orf48-211ENST00000599004 FMN2Q9NZ56 1722 aa17.99■□□□□ 0.47
C19orf48-211ENST00000599004 A0A0G2JS52 829 aa17.98■□□□□ 0.47
C19orf48-211ENST00000599004 PLEKHG5O94827 1062 aa17.98■□□□□ 0.47
C19orf48-211ENST00000599004 MYT1Q01538 1121 aa17.98■□□□□ 0.47
C19orf48-211ENST00000599004 CABLES1Q8TDN4 633 aa17.98■□□□□ 0.47
C19orf48-211ENST00000599004 TNS3Q68CZ2 1445 aa17.98■□□□□ 0.47
C19orf48-211ENST00000599004 PLEKHH1Q9ULM0 1364 aa17.97■□□□□ 0.47
C19orf48-211ENST00000599004 PPARGC1BQ86YN6 1023 aaKnown RBP17.97■□□□□ 0.47
C19orf48-211ENST00000599004 ADGRF5Q8IZF2 1346 aa17.97■□□□□ 0.47
C19orf48-211ENST00000599004 PSME1Q06323 249 aa17.96■□□□□ 0.47
C19orf48-211ENST00000599004 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
C19orf48-211ENST00000599004 ABCC11Q96J66 1382 aa17.95■□□□□ 0.46
C19orf48-211ENST00000599004 RRBP1Q9P2E9 1410 aaKnown RBP17.95■□□□□ 0.46
C19orf48-211ENST00000599004 LMOD2Q6P5Q4 547 aa17.94■□□□□ 0.46
C19orf48-211ENST00000599004 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
C19orf48-211ENST00000599004 ABCA3Q99758 1704 aa17.93■□□□□ 0.46
C19orf48-211ENST00000599004 EN1Q05925 392 aaPredicted RBP17.93■□□□□ 0.46
C19orf48-211ENST00000599004 TMEM132EQ6IEE7 984 aa17.93■□□□□ 0.46
C19orf48-211ENST00000599004 PHF8Q9UPP1 1060 aa17.93■□□□□ 0.46
C19orf48-211ENST00000599004 RGPD8O14715 1765 aaPredicted RBP17.93■□□□□ 0.46
C19orf48-211ENST00000599004 FAM98CQ17RN3 349 aaKnown RBP17.92■□□□□ 0.46
C19orf48-211ENST00000599004 SBNO1A3KN83 1393 aa17.91■□□□□ 0.46
C19orf48-211ENST00000599004 ARHGEF10O15013 1369 aa17.91■□□□□ 0.46
C19orf48-211ENST00000599004 FAM83GA6ND36 823 aa17.91■□□□□ 0.46
C19orf48-211ENST00000599004 R3HDM1Q15032 1099 aaKnown RBP17.91■□□□□ 0.46
C19orf48-211ENST00000599004 RGPD1P0DJD0 1748 aa17.91■□□□□ 0.46
C19orf48-211ENST00000599004 IFT172Q9UG01 1749 aa17.91■□□□□ 0.46
C19orf48-211ENST00000599004 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
C19orf48-211ENST00000599004 ANKRD30BQ9BXX2 1392 aa17.9■□□□□ 0.46
C19orf48-211ENST00000599004 YTHDC2Q9H6S0 1430 aaKnown RBP17.89■□□□□ 0.46
C19orf48-211ENST00000599004 NRAPQ86VF7 1730 aa17.89■□□□□ 0.45
C19orf48-211ENST00000599004 NRXN1Q9ULB1 1477 aa17.88■□□□□ 0.45
C19orf48-211ENST00000599004 BTG4Q9NY30 223 aa17.87■□□□□ 0.45
C19orf48-211ENST00000599004 FAM182BQ5T319 152 aa17.86■□□□□ 0.45
C19orf48-211ENST00000599004 SIRT1Q96EB6 747 aa17.86■□□□□ 0.45
C19orf48-211ENST00000599004 PIK3C2GO75747 1445 aa17.86■□□□□ 0.45
C19orf48-211ENST00000599004 DISP2A7MBM2 1401 aa17.85■□□□□ 0.45
C19orf48-211ENST00000599004 SPATA31E1Q6ZUB1 1445 aa17.85■□□□□ 0.45
C19orf48-211ENST00000599004 COL14A1Q05707 1796 aaKnown RBP17.84■□□□□ 0.45
C19orf48-211ENST00000599004 TNS1Q9HBL0 1735 aaKnown RBP17.84■□□□□ 0.45
C19orf48-211ENST00000599004 EZH2Q15910 746 aaKnown RBP17.83■□□□□ 0.44
C19orf48-211ENST00000599004 PMFBP1Q8TBY8 1022 aa17.83■□□□□ 0.44
C19orf48-211ENST00000599004 SPATA31A5Q5VU36 1347 aa17.82■□□□□ 0.44
C19orf48-211ENST00000599004 SPATA31A7Q8IWB4 1347 aa17.82■□□□□ 0.44
C19orf48-211ENST00000599004 YY1P25490 414 aa17.81■□□□□ 0.44
C19orf48-211ENST00000599004 SAFB2Q14151 953 aaKnown RBP eCLIP17.81■□□□□ 0.44
C19orf48-211ENST00000599004 ADGRB2O60241 1585 aa17.8■□□□□ 0.44
C19orf48-211ENST00000599004 TRPM3Q9HCF6 1732 aaPredicted RBP17.8■□□□□ 0.44
C19orf48-211ENST00000599004 THSD7AQ9UPZ6 1657 aa17.8■□□□□ 0.44
C19orf48-211ENST00000599004 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
C19orf48-211ENST00000599004 PRAM1Q96QH2 718 aa17.79■□□□□ 0.44
C19orf48-211ENST00000599004 C14orf93Q9H972 538 aaKnown RBP17.79■□□□□ 0.44
C19orf48-211ENST00000599004 ANKARQ7Z5J8 1434 aa17.79■□□□□ 0.44
C19orf48-211ENST00000599004 TRIM37O94972 964 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms