RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	SBNO2	Q9Y2G9	1366 aa		7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	SOX12	O15370	315 aa		7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	VAMP1	P23763	118 aa		7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	LMOD1	P29536	600 aa	Predicted RBP	7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	TMEM259	Q4ZIN3	620 aa		7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	CDCA8	Q53HL2	280 aa		7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	NOP9	Q86U38	636 aa	Known RBP	7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	ADAMTS19	Q8TE59	1207 aa		7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	NAP1L5	Q96NT1	182 aa	Predicted RBP	7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	PRM3	Q9NNZ6	103 aa		7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	PRDM10	Q9NQV6	1147 aa		7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	TBC1D2B	Q9UPU7	963 aa		7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	ERBB3	P21860	1342 aa		7.25	□□□□□ -1.25
PAF1-208	ENST00000598594	ATG7	O95352	703 aa		7.24	□□□□□ -1.25
PAF1-208	ENST00000598594	SSTR3	P32745	418 aa	Predicted RBP	7.24	□□□□□ -1.25
PAF1-208	ENST00000598594	EFCAB3	Q8N7B9	438 aa		7.24	□□□□□ -1.25
PAF1-208	ENST00000598594	BEGAIN	Q9BUH8	593 aa		7.24	□□□□□ -1.25
PAF1-208	ENST00000598594	METTL14	Q9HCE5	456 aa	Known RBP	7.24	□□□□□ -1.25
PAF1-208	ENST00000598594	TMA7	Q9Y2S6	64 aa	Known RBP	7.24	□□□□□ -1.25
PAF1-208	ENST00000598594	FCHSD2	O94868	740 aa		7.23	□□□□□ -1.25
PAF1-208	ENST00000598594	MORC4	Q8TE76	937 aa		7.23	□□□□□ -1.25
PAF1-208	ENST00000598594	TMUB1	Q9BVT8	246 aa		7.23	□□□□□ -1.25
PAF1-208	ENST00000598594	GRXCR2	A6NFK2	248 aa		7.22	□□□□□ -1.25
PAF1-208	ENST00000598594	PTMS	P20962	102 aa		7.22	□□□□□ -1.25
PAF1-208	ENST00000598594	MCCD1	P59942	119 aa	Predicted RBP	7.22	□□□□□ -1.25
PAF1-208	ENST00000598594	CCDC181	Q5TID7	509 aa		7.22	□□□□□ -1.25
PAF1-208	ENST00000598594	MYSM1	Q5VVJ2	828 aa		7.22	□□□□□ -1.25
PAF1-208	ENST00000598594	FBXO31	Q5XUX0	539 aa	Predicted RBP	7.22	□□□□□ -1.25
PAF1-208	ENST00000598594	SPTY2D1	Q68D10	685 aa	Predicted RBP	7.22	□□□□□ -1.25
PAF1-208	ENST00000598594	MICALL2	Q8IY33	904 aa		7.22	□□□□□ -1.25
PAF1-208	ENST00000598594	GPATCH3	Q96I76	525 aa		7.22	□□□□□ -1.25
PAF1-208	ENST00000598594	KLHL42	Q9P2K6	505 aa		7.22	□□□□□ -1.25
PAF1-208	ENST00000598594	TLDC2	A0PJX2	215 aa		7.21	□□□□□ -1.26
PAF1-208	ENST00000598594	PALM3	A6NDB9	673 aa	Predicted RBP	7.21	□□□□□ -1.26
PAF1-208	ENST00000598594	MAP4K4	O95819	1239 aa	Predicted RBP	7.21	□□□□□ -1.26
PAF1-208	ENST00000598594	RECK	O95980	971 aa		7.21	□□□□□ -1.26
PAF1-208	ENST00000598594	CLCN1	P35523	988 aa		7.21	□□□□□ -1.26
PAF1-208	ENST00000598594	ZEB1	P37275	1124 aa	Predicted RBP	7.21	□□□□□ -1.26
PAF1-208	ENST00000598594	CLK2	P49760	499 aa	Known RBP	7.21	□□□□□ -1.26
PAF1-208	ENST00000598594	MARS	P56192	900 aa	Known RBP	7.21	□□□□□ -1.26
PAF1-208	ENST00000598594	IGBP1	P78318	339 aa		7.21	□□□□□ -1.26
PAF1-208	ENST00000598594	FAM50A	Q14320	339 aa	Known RBP	7.21	□□□□□ -1.26
PAF1-208	ENST00000598594	LARGE2	Q8N3Y3	721 aa		7.21	□□□□□ -1.26
PAF1-208	ENST00000598594	VTI1A	Q96AJ9	217 aa		7.21	□□□□□ -1.26
PAF1-208	ENST00000598594	PEX14	O75381	377 aa		7.2	□□□□□ -1.26
PAF1-208	ENST00000598594	ERCC5	P28715	1186 aa	Predicted RBP	7.2	□□□□□ -1.26
PAF1-208	ENST00000598594	NPAS4	Q8IUM7	802 aa		7.2	□□□□□ -1.26
PAF1-208	ENST00000598594	RNF166	Q96A37	237 aa	Predicted RBP	7.2	□□□□□ -1.26
PAF1-208	ENST00000598594	DNAJC2	Q99543	621 aa	Known RBP	7.2	□□□□□ -1.26
PAF1-208	ENST00000598594	LNPK	Q9C0E8	428 aa		7.2	□□□□□ -1.26
PAF1-208	ENST00000598594	GPCPD1	Q9NPB8	672 aa		7.2	□□□□□ -1.26
PAF1-208	ENST00000598594	ANKRD33B	A6NCL7	494 aa		7.19	□□□□□ -1.26
PAF1-208	ENST00000598594	PTGER2	P43116	358 aa		7.19	□□□□□ -1.26
PAF1-208	ENST00000598594	MDM2	Q00987	491 aa	Predicted RBP	7.19	□□□□□ -1.26
PAF1-208	ENST00000598594	VARS2	Q5ST30	1063 aa	Known RBP	7.19	□□□□□ -1.26
PAF1-208	ENST00000598594	PPP1R15B	Q5SWA1	713 aa		7.19	□□□□□ -1.26
PAF1-208	ENST00000598594	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	7.19	□□□□□ -1.26
PAF1-208	ENST00000598594	EMILIN3	Q9NT22	766 aa		7.19	□□□□□ -1.26
PAF1-208	ENST00000598594	LAS1L	Q9Y4W2	734 aa	Known RBP	7.19	□□□□□ -1.26
PAF1-208	ENST00000598594	hCG_2014768	A0A024R1R8	64 aa		7.18	□□□□□ -1.26
PAF1-208	ENST00000598594	RALBP1	Q15311	655 aa		7.18	□□□□□ -1.26
PAF1-208	ENST00000598594	PARN	O95453	639 aa	Known RBP	7.17	□□□□□ -1.26
PAF1-208	ENST00000598594	PTPRO	Q16827	1216 aa		7.17	□□□□□ -1.26
PAF1-208	ENST00000598594	TSNAXIP1	Q2TAA8	658 aa		7.17	□□□□□ -1.26
PAF1-208	ENST00000598594	EGFLAM	Q63HQ2	1017 aa		7.17	□□□□□ -1.26
PAF1-208	ENST00000598594	TMEM92	Q6UXU6	159 aa		7.17	□□□□□ -1.26
PAF1-208	ENST00000598594	ZNF687	Q8N1G0	1237 aa		7.17	□□□□□ -1.26
PAF1-208	ENST00000598594	GPATCH11	Q8N954	259 aa		7.17	□□□□□ -1.26
PAF1-208	ENST00000598594	TFIP11	Q9UBB9	837 aa	Known RBP	7.17	□□□□□ -1.26
PAF1-208	ENST00000598594	MAGEC2	Q9UBF1	373 aa	Predicted RBP	7.17	□□□□□ -1.26
PAF1-208	ENST00000598594	SOWAHD	A6NJG2	315 aa		7.16	□□□□□ -1.26
PAF1-208	ENST00000598594	HMGB1P1	B2RPK0	211 aa	Predicted RBP	7.16	□□□□□ -1.26
PAF1-208	ENST00000598594	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.16	□□□□□ -1.26
PAF1-208	ENST00000598594	PPP2R2D	Q66LE6	453 aa		7.16	□□□□□ -1.26
PAF1-208	ENST00000598594	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.16	□□□□□ -1.26
PAF1-208	ENST00000598594	SPACA7	Q96KW9	195 aa		7.16	□□□□□ -1.26
PAF1-208	ENST00000598594	TANGO6	Q9C0B7	1094 aa		7.16	□□□□□ -1.26
PAF1-208	ENST00000598594	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.16	□□□□□ -1.26
PAF1-208	ENST00000598594	TERF2IP	Q9NYB0	399 aa		7.16	□□□□□ -1.26
PAF1-208	ENST00000598594	SOCS7	O14512	581 aa		7.15	□□□□□ -1.26
PAF1-208	ENST00000598594	ARID4A	P29374	1257 aa	Predicted RBP	7.15	□□□□□ -1.26
PAF1-208	ENST00000598594	TAGLN	Q01995	201 aa	Known RBP	7.15	□□□□□ -1.26
PAF1-208	ENST00000598594	SDE2	Q6IQ49	451 aa		7.15	□□□□□ -1.26
PAF1-208	ENST00000598594	PHLDB3	Q6NSJ2	640 aa		7.15	□□□□□ -1.26
PAF1-208	ENST00000598594	GPR153	Q6NV75	609 aa		7.15	□□□□□ -1.26
PAF1-208	ENST00000598594	SMC5	Q8IY18	1101 aa		7.15	□□□□□ -1.26
PAF1-208	ENST00000598594	SGSM3	Q96HU1	749 aa		7.15	□□□□□ -1.26
PAF1-208	ENST00000598594	OSBP	P22059	807 aa		7.14	□□□□□ -1.27
PAF1-208	ENST00000598594	CCDC144B	Q3MJ40	725 aa		7.14	□□□□□ -1.27
PAF1-208	ENST00000598594	TMTC2	Q8N394	836 aa		7.14	□□□□□ -1.27
PAF1-208	ENST00000598594	KCNB2	Q92953	911 aa		7.14	□□□□□ -1.27
PAF1-208	ENST00000598594	MS4A4A	Q96JQ5	239 aa		7.14	□□□□□ -1.27
PAF1-208	ENST00000598594	UBA5	Q9GZZ9	404 aa		7.14	□□□□□ -1.27
PAF1-208	ENST00000598594	BIN2	Q9UBW5	565 aa	Predicted RBP	7.14	□□□□□ -1.27
PAF1-208	ENST00000598594	IBSP	P21815	317 aa	Predicted RBP	7.13	□□□□□ -1.27
PAF1-208	ENST00000598594	PSME1	Q06323	249 aa		7.13	□□□□□ -1.27
PAF1-208	ENST00000598594	WASHC4	Q2M389	1173 aa		7.13	□□□□□ -1.27
PAF1-208	ENST00000598594	CCDC194	A0A1B0GVG4	234 aa		7.12	□□□□□ -1.27
PAF1-208	ENST00000598594	HSP90AB2P	Q58FF8	381 aa		7.12	□□□□□ -1.27
PAF1-208	ENST00000598594	C9orf131	Q5VYM1	1079 aa		7.12	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms