RNA–Protein interactions for RNA: ENST00000598127.1

PAF1-207, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-207ENST00000598127 POGKQ9P215 609 aa29.9■■■□□ 2.38
PAF1-207ENST00000598127 NBPF1Q3BBV0 1214 aa29.89■■■□□ 2.38
PAF1-207ENST00000598127 BRINP3Q76B58 766 aa29.88■■■□□ 2.37
PAF1-207ENST00000598127 CDC42BPGQ6DT37 1551 aa29.88■■■□□ 2.37
PAF1-207ENST00000598127 TONSLQ96HA7 1378 aa29.88■■■□□ 2.37
PAF1-207ENST00000598127 C1orf167Q5SNV9 1468 aa29.86■■■□□ 2.37
PAF1-207ENST00000598127 SAFB2Q14151 953 aaKnown RBP eCLIP29.85■■■□□ 2.37
PAF1-207ENST00000598127 CLSPNQ9HAW4 1339 aa29.84■■■□□ 2.37
PAF1-207ENST00000598127 PHLPP1O60346 1717 aa29.84■■■□□ 2.37
PAF1-207ENST00000598127 ARHGEF28Q8N1W1 1705 aaKnown RBP29.82■■■□□ 2.36
PAF1-207ENST00000598127 TRPM1Q7Z4N2 1603 aa29.82■■■□□ 2.36
PAF1-207ENST00000598127 AHDC1Q5TGY3 1603 aaPredicted RBP29.8■■■□□ 2.36
PAF1-207ENST00000598127 NBPF8Q3BBV2 869 aa29.79■■■□□ 2.36
PAF1-207ENST00000598127 FMN2Q9NZ56 1722 aa29.79■■■□□ 2.36
PAF1-207ENST00000598127 ORAI2Q96SN7 254 aa29.78■■■□□ 2.36
PAF1-207ENST00000598127 NHSL1Q5SYE7 1610 aa29.75■■■□□ 2.35
PAF1-207ENST00000598127 COL16A1Q07092 1604 aaPredicted RBP29.74■■■□□ 2.35
PAF1-207ENST00000598127 MINK1Q8N4C8 1332 aaPredicted RBP29.74■■■□□ 2.35
PAF1-207ENST00000598127 ADGRB2O60241 1585 aa29.74■■■□□ 2.35
PAF1-207ENST00000598127 NUTM2FA1L443 756 aa29.74■■■□□ 2.35
PAF1-207ENST00000598127 ESCO1Q5FWF5 840 aa29.74■■■□□ 2.35
PAF1-207ENST00000598127 ROCK2O75116 1388 aaKnown RBP29.73■■■□□ 2.35
PAF1-207ENST00000598127 RGPD8O14715 1765 aaPredicted RBP29.72■■■□□ 2.35
PAF1-207ENST00000598127 CCER1Q8TC90 406 aaPredicted RBP29.72■■■□□ 2.35
PAF1-207ENST00000598127 HIRIP3Q9BW71 556 aaPredicted RBP29.72■■■□□ 2.35
PAF1-207ENST00000598127 TIMELESSQ9UNS1 1208 aa29.7■■■□□ 2.35
PAF1-207ENST00000598127 DDX17Q92841 729 aaKnown RBP29.69■■■□□ 2.34
PAF1-207ENST00000598127 WASLO00401 505 aaPredicted RBP29.68■■■□□ 2.34
PAF1-207ENST00000598127 JCADQ9P266 1359 aa29.67■■■□□ 2.34
PAF1-207ENST00000598127 GPRASP1Q5JY77 1395 aa29.66■■■□□ 2.34
PAF1-207ENST00000598127 CENPJQ9HC77 1338 aaPredicted RBP29.66■■■□□ 2.34
PAF1-207ENST00000598127 LRRC59Q96AG4 307 aaKnown RBP29.65■■■□□ 2.34
PAF1-207ENST00000598127 EIF3AQ14152 1382 aaKnown RBP29.64■■■□□ 2.34
PAF1-207ENST00000598127 ANKARQ7Z5J8 1434 aa29.64■■■□□ 2.34
PAF1-207ENST00000598127 RALGAPBQ86X10 1494 aa29.63■■■□□ 2.33
PAF1-207ENST00000598127 SOS2Q07890 1332 aaPredicted RBP29.63■■■□□ 2.33
PAF1-207ENST00000598127 NPHP3Q7Z494 1330 aa29.63■■■□□ 2.33
PAF1-207ENST00000598127 FOXO3O43524 673 aa29.62■■■□□ 2.33
PAF1-207ENST00000598127 USP32Q8NFA0 1604 aa29.62■■■□□ 2.33
PAF1-207ENST00000598127 MED1Q15648 1581 aaPredicted RBP29.61■■■□□ 2.33
PAF1-207ENST00000598127 KIF1AQ12756 1690 aa29.61■■■□□ 2.33
PAF1-207ENST00000598127 CARD11Q9BXL7 1154 aa29.61■■■□□ 2.33
PAF1-207ENST00000598127 PHF8Q9UPP1 1060 aa29.61■■■□□ 2.33
PAF1-207ENST00000598127 TULP4Q9NRJ4 1543 aa29.6■■■□□ 2.33
PAF1-207ENST00000598127 SHPRHQ149N8 1683 aa29.6■■■□□ 2.33
PAF1-207ENST00000598127 QRICH2Q9H0J4 1663 aa29.6■■■□□ 2.33
PAF1-207ENST00000598127 CDK19Q9BWU1 502 aa29.59■■■□□ 2.33
PAF1-207ENST00000598127 DISP3Q9P2K9 1392 aa29.58■■■□□ 2.33
PAF1-207ENST00000598127 PRR36Q9H6K5 1346 aa29.57■■■□□ 2.32
PAF1-207ENST00000598127 SPATA31A6Q5VVP1 1343 aa29.56■■■□□ 2.32
PAF1-207ENST00000598127 NUDT16Q96DE0 195 aaKnown RBP29.54■■■□□ 2.32
PAF1-207ENST00000598127 PXDNQ92626 1479 aa29.54■■■□□ 2.32
PAF1-207ENST00000598127 PMFBP1Q8TBY8 1022 aa29.52■■■□□ 2.32
PAF1-207ENST00000598127 XPCQ01831 940 aaPredicted RBP29.51■■■□□ 2.31
PAF1-207ENST00000598127 KRT28Q7Z3Y7 464 aa29.51■■■□□ 2.31
PAF1-207ENST00000598127 ITSN1Q15811 1721 aa29.51■■■□□ 2.31
PAF1-207ENST00000598127 PNPLA6Q8IY17 1366 aa29.5■■■□□ 2.31
PAF1-207ENST00000598127 ATP7BP35670 1465 aa29.49■■■□□ 2.31
PAF1-207ENST00000598127 PSME1Q06323 249 aa29.48■■■□□ 2.31
PAF1-207ENST00000598127 CCDC61Q9Y6R9 512 aa29.48■■■□□ 2.31
PAF1-207ENST00000598127 EVC2Q86UK5 1308 aa29.47■■■□□ 2.31
PAF1-207ENST00000598127 SRPK2P78362 688 aaKnown RBP29.47■■■□□ 2.31
PAF1-207ENST00000598127 PHF23Q9BUL5 403 aaPredicted RBP29.45■■■□□ 2.31
PAF1-207ENST00000598127 CABP2Q9NPB3 220 aa29.45■■■□□ 2.31
PAF1-207ENST00000598127 NGDNQ8NEJ9 315 aaKnown RBP29.44■■■□□ 2.3
PAF1-207ENST00000598127 SBNO2Q9Y2G9 1366 aa29.43■■■□□ 2.3
PAF1-207ENST00000598127 NUTM2BA6NNL0 878 aaPredicted RBP29.43■■■□□ 2.3
PAF1-207ENST00000598127 NUTM2EB1AL46 878 aaPredicted RBP29.43■■■□□ 2.3
PAF1-207ENST00000598127 NUTM2AQ8IVF1 878 aaPredicted RBP29.43■■■□□ 2.3
PAF1-207ENST00000598127 TOPAZ1Q8N9V7 1692 aa29.43■■■□□ 2.3
PAF1-207ENST00000598127 SPATA31A3Q5VYP0 1347 aa29.43■■■□□ 2.3
PAF1-207ENST00000598127 PLEKHG3A1L390 1219 aa29.42■■■□□ 2.3
PAF1-207ENST00000598127 LRP6O75581 1613 aa29.42■■■□□ 2.3
PAF1-207ENST00000598127 COL22A1Q8NFW1 1626 aaPredicted RBP29.41■■■□□ 2.3
PAF1-207ENST00000598127 SBNO1A3KN83 1393 aa29.4■■■□□ 2.3
PAF1-207ENST00000598127 MEX3CQ5U5Q3 659 aaKnown RBP29.38■■■□□ 2.29
PAF1-207ENST00000598127 POLR3AO14802 1390 aaPredicted RBP29.37■■■□□ 2.29
PAF1-207ENST00000598127 ST20-MTHFSA0A0A6YYL1 179 aa29.36■■■□□ 2.29
PAF1-207ENST00000598127 ACEP12821 1306 aa29.36■■■□□ 2.29
PAF1-207ENST00000598127 TRPM3Q9HCF6 1732 aaPredicted RBP29.36■■■□□ 2.29
PAF1-207ENST00000598127 TNS3Q68CZ2 1445 aa29.36■■■□□ 2.29
PAF1-207ENST00000598127 PPIP5K1Q6PFW1 1433 aa29.36■■■□□ 2.29
PAF1-207ENST00000598127 SLC24A1O60721 1099 aa29.34■■■□□ 2.29
PAF1-207ENST00000598127 RGS17Q9UGC6 210 aaPredicted RBP29.34■■■□□ 2.29
PAF1-207ENST00000598127 USP47Q96K76 1375 aa29.32■■■□□ 2.28
PAF1-207ENST00000598127 TESK2Q96S53 571 aa29.32■■■□□ 2.28
PAF1-207ENST00000598127 CABP1Q9NZU7 370 aa29.32■■■□□ 2.28
PAF1-207ENST00000598127 ARHGEF10O15013 1369 aa29.31■■■□□ 2.28
PAF1-207ENST00000598127 LMOD2Q6P5Q4 547 aa29.31■■■□□ 2.28
PAF1-207ENST00000598127 ATAD2Q6PL18 1390 aa29.29■■■□□ 2.28
PAF1-207ENST00000598127 ALS2Q96Q42 1657 aa29.29■■■□□ 2.28
PAF1-207ENST00000598127 PAK3O75914 559 aaPredicted RBP29.28■■■□□ 2.28
PAF1-207ENST00000598127 ADAMTS2O95450 1211 aa29.28■■■□□ 2.28
PAF1-207ENST00000598127 PUS7Q96PZ0 661 aaKnown RBP29.28■■■□□ 2.28
PAF1-207ENST00000598127 ILDR2Q71H61 639 aa29.26■■■□□ 2.27
PAF1-207ENST00000598127 C8orf37Q96NL8 207 aa29.24■■■□□ 2.27
PAF1-207ENST00000598127 MARF1Q9Y4F3 1742 aaKnown RBP29.24■■■□□ 2.27
PAF1-207ENST00000598127 ZNF772Q68DY9 489 aaPredicted RBP29.22■■■□□ 2.27
PAF1-207ENST00000598127 CABLES1Q8TDN4 633 aa29.22■■■□□ 2.27
PAF1-207ENST00000598127 NGLY1Q96IV0 654 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms