RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 TRAK1Q9UPV9 953 aa24.15■■□□□ 1.46
SSBP4-204ENST00000597724 CDC42BPGQ6DT37 1551 aa24.15■■□□□ 1.46
SSBP4-204ENST00000597724 PHLPP1O60346 1717 aa24.14■■□□□ 1.45
SSBP4-204ENST00000597724 KIAA1210Q9ULL0 1709 aa24.13■■□□□ 1.45
SSBP4-204ENST00000597724 AHDC1Q5TGY3 1603 aaPredicted RBP24.12■■□□□ 1.45
SSBP4-204ENST00000597724 POGKQ9P215 609 aa24.11■■□□□ 1.45
SSBP4-204ENST00000597724 COL16A1Q07092 1604 aaPredicted RBP24.1■■□□□ 1.45
SSBP4-204ENST00000597724 SAFB2Q14151 953 aaKnown RBP eCLIP24.09■■□□□ 1.451e-6■■■■□ 20.5
SSBP4-204ENST00000597724 NBPF1Q3BBV0 1214 aa24.09■■□□□ 1.45
SSBP4-204ENST00000597724 ORAI2Q96SN7 254 aa24.09■■□□□ 1.45
SSBP4-204ENST00000597724 DISP3Q9P2K9 1392 aa24.06■■□□□ 1.44
SSBP4-204ENST00000597724 NHSL1Q5SYE7 1610 aa24.06■■□□□ 1.44
SSBP4-204ENST00000597724 FMN2Q9NZ56 1722 aa24.04■■□□□ 1.44
SSBP4-204ENST00000597724 MED1Q15648 1581 aaPredicted RBP24.04■■□□□ 1.44
SSBP4-204ENST00000597724 NUTM2FA1L443 756 aa24.04■■□□□ 1.44
SSBP4-204ENST00000597724 JCADQ9P266 1359 aa24.03■■□□□ 1.44
SSBP4-204ENST00000597724 ESCO1Q5FWF5 840 aa24.03■■□□□ 1.44
SSBP4-204ENST00000597724 DDX17Q92841 729 aaKnown RBP24.03■■□□□ 1.44
SSBP4-204ENST00000597724 ARHGEF28Q8N1W1 1705 aaKnown RBP24.03■■□□□ 1.44
SSBP4-204ENST00000597724 TONSLQ96HA7 1378 aa24.02■■□□□ 1.44
SSBP4-204ENST00000597724 ADGRB2O60241 1585 aa24■■□□□ 1.43
SSBP4-204ENST00000597724 TRPM1Q7Z4N2 1603 aa24■■□□□ 1.43
SSBP4-204ENST00000597724 HIRIP3Q9BW71 556 aaPredicted RBP24■■□□□ 1.43
SSBP4-204ENST00000597724 MINK1Q8N4C8 1332 aaPredicted RBP24■■□□□ 1.43
SSBP4-204ENST00000597724 NBPF8Q3BBV2 869 aa23.99■■□□□ 1.43
SSBP4-204ENST00000597724 LRRC59Q96AG4 307 aaKnown RBP23.98■■□□□ 1.43
SSBP4-204ENST00000597724 SOS2Q07890 1332 aaPredicted RBP23.97■■□□□ 1.43
SSBP4-204ENST00000597724 NPHP3Q7Z494 1330 aa23.95■■□□□ 1.42
SSBP4-204ENST00000597724 WASLO00401 505 aaPredicted RBP23.95■■□□□ 1.42
SSBP4-204ENST00000597724 SHPRHQ149N8 1683 aa23.95■■□□□ 1.42
SSBP4-204ENST00000597724 RGPD8O14715 1765 aaPredicted RBP23.94■■□□□ 1.42
SSBP4-204ENST00000597724 FOXO3O43524 673 aa23.94■■□□□ 1.42
SSBP4-204ENST00000597724 ANKARQ7Z5J8 1434 aa23.93■■□□□ 1.42
SSBP4-204ENST00000597724 ROCK2O75116 1388 aaKnown RBP23.93■■□□□ 1.42
SSBP4-204ENST00000597724 SPATA31A6Q5VVP1 1343 aa23.93■■□□□ 1.42
SSBP4-204ENST00000597724 CLSPNQ9HAW4 1339 aa23.93■■□□□ 1.42
SSBP4-204ENST00000597724 USP32Q8NFA0 1604 aa23.92■■□□□ 1.42
SSBP4-204ENST00000597724 EIF3AQ14152 1382 aaKnown RBP23.91■■□□□ 1.42
SSBP4-204ENST00000597724 PHF8Q9UPP1 1060 aa23.91■■□□□ 1.42
SSBP4-204ENST00000597724 KIF1AQ12756 1690 aa23.91■■□□□ 1.42
SSBP4-204ENST00000597724 GPRASP1Q5JY77 1395 aa23.91■■□□□ 1.42
SSBP4-204ENST00000597724 CENPJQ9HC77 1338 aaPredicted RBP23.9■■□□□ 1.42
SSBP4-204ENST00000597724 PXDNQ92626 1479 aa23.9■■□□□ 1.42
SSBP4-204ENST00000597724 TULP4Q9NRJ4 1543 aa23.89■■□□□ 1.42
SSBP4-204ENST00000597724 PRR36Q9H6K5 1346 aa23.89■■□□□ 1.42
SSBP4-204ENST00000597724 PHF23Q9BUL5 403 aaPredicted RBP23.89■■□□□ 1.41
SSBP4-204ENST00000597724 PNPLA6Q8IY17 1366 aa23.89■■□□□ 1.41
SSBP4-204ENST00000597724 XPCQ01831 940 aaPredicted RBP23.87■■□□□ 1.41
SSBP4-204ENST00000597724 CDK19Q9BWU1 502 aa23.87■■□□□ 1.41
SSBP4-204ENST00000597724 LRP6O75581 1613 aa23.86■■□□□ 1.41
SSBP4-204ENST00000597724 KRT28Q7Z3Y7 464 aa23.85■■□□□ 1.41
SSBP4-204ENST00000597724 PMFBP1Q8TBY8 1022 aa23.85■■□□□ 1.41
SSBP4-204ENST00000597724 RALGAPBQ86X10 1494 aa23.85■■□□□ 1.41
SSBP4-204ENST00000597724 ILDR2Q71H61 639 aa23.84■■□□□ 1.41
SSBP4-204ENST00000597724 NUDT16Q96DE0 195 aaKnown RBP23.84■■□□□ 1.41
SSBP4-204ENST00000597724 QRICH2Q9H0J4 1663 aa23.83■■□□□ 1.41
SSBP4-204ENST00000597724 NUTM2BA6NNL0 878 aaPredicted RBP23.83■■□□□ 1.41
SSBP4-204ENST00000597724 NUTM2EB1AL46 878 aaPredicted RBP23.83■■□□□ 1.41
SSBP4-204ENST00000597724 NUTM2AQ8IVF1 878 aaPredicted RBP23.83■■□□□ 1.41
SSBP4-204ENST00000597724 CARD11Q9BXL7 1154 aa23.83■■□□□ 1.41
SSBP4-204ENST00000597724 RGS17Q9UGC6 210 aaPredicted RBP23.83■■□□□ 1.41
SSBP4-204ENST00000597724 TIMELESSQ9UNS1 1208 aa23.83■■□□□ 1.41
SSBP4-204ENST00000597724 ATP7BP35670 1465 aa23.82■■□□□ 1.4
SSBP4-204ENST00000597724 CCER1Q8TC90 406 aaPredicted RBP23.82■■□□□ 1.4
SSBP4-204ENST00000597724 PSME1Q06323 249 aa23.8■■□□□ 1.4
SSBP4-204ENST00000597724 SPATA31A3Q5VYP0 1347 aa23.8■■□□□ 1.4
SSBP4-204ENST00000597724 MEX3CQ5U5Q3 659 aaKnown RBP23.79■■□□□ 1.4
SSBP4-204ENST00000597724 COL22A1Q8NFW1 1626 aaPredicted RBP23.78■■□□□ 1.4
SSBP4-204ENST00000597724 CCDC61Q9Y6R9 512 aa23.78■■□□□ 1.4
SSBP4-204ENST00000597724 ITSN1Q15811 1721 aa23.78■■□□□ 1.4
SSBP4-204ENST00000597724 SRPK2P78362 688 aaKnown RBP23.77■■□□□ 1.4
SSBP4-204ENST00000597724 NGDNQ8NEJ9 315 aaKnown RBP23.76■■□□□ 1.39
SSBP4-204ENST00000597724 CABP2Q9NPB3 220 aa23.75■■□□□ 1.39
SSBP4-204ENST00000597724 SBNO1A3KN83 1393 aa23.75■■□□□ 1.39
SSBP4-204ENST00000597724 EVC2Q86UK5 1308 aa23.74■■□□□ 1.39
SSBP4-204ENST00000597724 TNS3Q68CZ2 1445 aa23.74■■□□□ 1.39
SSBP4-204ENST00000597724 TOPAZ1Q8N9V7 1692 aa23.73■■□□□ 1.39
SSBP4-204ENST00000597724 PLEKHG3A1L390 1219 aa23.73■■□□□ 1.39
SSBP4-204ENST00000597724 SBNO2Q9Y2G9 1366 aa23.72■■□□□ 1.39
SSBP4-204ENST00000597724 ADAMTS2O95450 1211 aa23.71■■□□□ 1.39
SSBP4-204ENST00000597724 POTEAQ6S8J7 498 aa23.71■■□□□ 1.39
SSBP4-204ENST00000597724 TRPM3Q9HCF6 1732 aaPredicted RBP23.7■■□□□ 1.39
SSBP4-204ENST00000597724 POLR3AO14802 1390 aaPredicted RBP23.7■■□□□ 1.38
SSBP4-204ENST00000597724 ACEP12821 1306 aa23.7■■□□□ 1.38
SSBP4-204ENST00000597724 PPIP5K1Q6PFW1 1433 aa23.68■■□□□ 1.38
SSBP4-204ENST00000597724 ARHGEF10O15013 1369 aa23.68■■□□□ 1.38
SSBP4-204ENST00000597724 LMOD2Q6P5Q4 547 aa23.68■■□□□ 1.38
SSBP4-204ENST00000597724 C8orf37Q96NL8 207 aa23.68■■□□□ 1.38
SSBP4-204ENST00000597724 ZNF772Q68DY9 489 aaPredicted RBP23.67■■□□□ 1.38
SSBP4-204ENST00000597724 AFF2P51816 1311 aa23.66■■□□□ 1.38
SSBP4-204ENST00000597724 CABP1Q9NZU7 370 aa23.66■■□□□ 1.38
SSBP4-204ENST00000597724 ALS2Q96Q42 1657 aa23.65■■□□□ 1.38
SSBP4-204ENST00000597724 NGLY1Q96IV0 654 aa23.65■■□□□ 1.38
SSBP4-204ENST00000597724 ST20-MTHFSA0A0A6YYL1 179 aa23.64■■□□□ 1.37
SSBP4-204ENST00000597724 PAK3O75914 559 aaPredicted RBP23.64■■□□□ 1.37
SSBP4-204ENST00000597724 CABLES1Q8TDN4 633 aa23.63■■□□□ 1.37
SSBP4-204ENST00000597724 TESK2Q96S53 571 aa23.62■■□□□ 1.37
SSBP4-204ENST00000597724 MARF1Q9Y4F3 1742 aaKnown RBP23.61■■□□□ 1.37
SSBP4-204ENST00000597724 HAP1P54257 671 aaPredicted RBP23.6■■□□□ 1.37
SSBP4-204ENST00000597724 FNBP4Q8N3X1 1017 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms