RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 WDR63Q8IWG1 891 aa15.98■□□□□ 0.15
ZNF558-205ENST00000597304 BCL2L13Q9BXK5 485 aa15.98■□□□□ 0.15
ZNF558-205ENST00000597304 GZF1Q9H116 711 aaPredicted RBP15.98■□□□□ 0.15
ZNF558-205ENST00000597304 TCP11L2Q8N4U5 519 aa15.97■□□□□ 0.15
ZNF558-205ENST00000597304 PANK2Q9BZ23 570 aa15.96■□□□□ 0.15
ZNF558-205ENST00000597304 C22orf23Q9BZE7 217 aa15.96■□□□□ 0.15
ZNF558-205ENST00000597304 PNNQ9H307 717 aaKnown RBP15.96■□□□□ 0.15
ZNF558-205ENST00000597304 DEPDC5O75140 1603 aa15.96■□□□□ 0.15
ZNF558-205ENST00000597304 NEURL4Q96JN8 1562 aa15.96■□□□□ 0.15
ZNF558-205ENST00000597304 PLCH2O75038 1416 aa15.96■□□□□ 0.15
ZNF558-205ENST00000597304 MYO3AQ8NEV4 1616 aa15.96■□□□□ 0.14
ZNF558-205ENST00000597304 CLCN1P35523 988 aa15.96■□□□□ 0.14
ZNF558-205ENST00000597304 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.14
ZNF558-205ENST00000597304 RTEL1-TNFRSF6BF6WH68 1400 aa15.95■□□□□ 0.14
ZNF558-205ENST00000597304 CFAP70Q5T0N1 1121 aa15.95■□□□□ 0.14
ZNF558-205ENST00000597304 MYOM2P54296 1465 aa15.95■□□□□ 0.14
ZNF558-205ENST00000597304 TRAPPC8Q9Y2L5 1435 aa15.95■□□□□ 0.14
ZNF558-205ENST00000597304 TRAK2O60296 914 aa15.95■□□□□ 0.14
ZNF558-205ENST00000597304 MVPQ14764 893 aaKnown RBP15.95■□□□□ 0.14
ZNF558-205ENST00000597304 MORC1Q86VD1 984 aa15.95■□□□□ 0.14
ZNF558-205ENST00000597304 NAP1L5Q96NT1 182 aaPredicted RBP15.95■□□□□ 0.14
ZNF558-205ENST00000597304 EFCAB2Q5VUJ9 269 aa15.94■□□□□ 0.14
ZNF558-205ENST00000597304 NSD3Q9BZ95 1437 aa15.94■□□□□ 0.14
ZNF558-205ENST00000597304 MRE11P49959 708 aa15.94■□□□□ 0.14
ZNF558-205ENST00000597304 MFAP1P55081 439 aaKnown RBP15.94■□□□□ 0.14
ZNF558-205ENST00000597304 KANK1Q14678 1352 aa15.93■□□□□ 0.14
ZNF558-205ENST00000597304 CCDC27Q2M243 656 aa15.93■□□□□ 0.14
ZNF558-205ENST00000597304 MYH16Q9H6N6 1097 aa15.93■□□□□ 0.14
ZNF558-205ENST00000597304 SBNO2Q9Y2G9 1366 aa15.93■□□□□ 0.14
ZNF558-205ENST00000597304 DDX11L8A8MPP1 907 aa15.92■□□□□ 0.14
ZNF558-205ENST00000597304 SPAG9O60271 1321 aaKnown RBP15.92■□□□□ 0.14
ZNF558-205ENST00000597304 ZFYVE16Q7Z3T8 1539 aa15.92■□□□□ 0.14
ZNF558-205ENST00000597304 TNNT2P45379 298 aaPredicted RBP15.92■□□□□ 0.14
ZNF558-205ENST00000597304 HSCBQ8IWL3 235 aa15.92■□□□□ 0.14
ZNF558-205ENST00000597304 FTSJ3Q8IY81 847 aaKnown RBP15.92■□□□□ 0.14
ZNF558-205ENST00000597304 ZKSCAN2Q63HK3 967 aa15.91■□□□□ 0.14
ZNF558-205ENST00000597304 KIF1BO60333 1816 aa15.9■□□□□ 0.14
ZNF558-205ENST00000597304 GLIPR1L2Q4G1C9 344 aa15.9■□□□□ 0.14
ZNF558-205ENST00000597304 IFT172Q9UG01 1749 aa15.9■□□□□ 0.14
ZNF558-205ENST00000597304 DZIP1LQ8IYY4 767 aaKnown RBP15.9■□□□□ 0.14
ZNF558-205ENST00000597304 ADGRF5Q8IZF2 1346 aa15.9■□□□□ 0.14
ZNF558-205ENST00000597304 ZNF518AQ6AHZ1 1483 aa15.9■□□□□ 0.14
ZNF558-205ENST00000597304 ISY1Q9ULR0 285 aaKnown RBP15.89■□□□□ 0.13
ZNF558-205ENST00000597304 CFAP53Q96M91 514 aa15.89■□□□□ 0.13
ZNF558-205ENST00000597304 GRPEL1Q9HAV7 217 aa15.89■□□□□ 0.13
ZNF558-205ENST00000597304 VWDEQ8N2E2 1590 aa15.88■□□□□ 0.13
ZNF558-205ENST00000597304 USP32Q8NFA0 1604 aa15.88■□□□□ 0.13
ZNF558-205ENST00000597304 UGGT1Q9NYU2 1555 aa15.87■□□□□ 0.13
ZNF558-205ENST00000597304 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
ZNF558-205ENST00000597304 NCOA3Q9Y6Q9 1424 aa15.87■□□□□ 0.13
ZNF558-205ENST00000597304 ZC3H13Q5T200 1668 aaKnown RBP15.86■□□□□ 0.13
ZNF558-205ENST00000597304 HDAC1Q13547 482 aaPredicted RBP15.86■□□□□ 0.13
ZNF558-205ENST00000597304 ZNF692Q9BU19 519 aaPredicted RBP15.86■□□□□ 0.13
ZNF558-205ENST00000597304 HSP90AA1P07900 732 aaKnown RBP15.86■□□□□ 0.13
ZNF558-205ENST00000597304 CT47B1P0C2W7 299 aaPredicted RBP15.86■□□□□ 0.13
ZNF558-205ENST00000597304 MTHFSP49914 203 aa15.86■□□□□ 0.13
ZNF558-205ENST00000597304 ADGRB2O60241 1585 aa15.86■□□□□ 0.13
ZNF558-205ENST00000597304 MROH2AA6NES4 1674 aa15.85■□□□□ 0.13
ZNF558-205ENST00000597304 QRICH2Q9H0J4 1663 aa15.85■□□□□ 0.13
ZNF558-205ENST00000597304 ADGRL1O94910 1474 aa15.85■□□□□ 0.13
ZNF558-205ENST00000597304 ZCCHC11Q5TAX3 1644 aaKnown RBP15.85■□□□□ 0.13
ZNF558-205ENST00000597304 SETBP1Q9Y6X0 1596 aa15.85■□□□□ 0.13
ZNF558-205ENST00000597304 SMC4Q9NTJ3 1288 aa15.84■□□□□ 0.13
ZNF558-205ENST00000597304 DDX19BQ9UMR2 479 aa15.84■□□□□ 0.13
ZNF558-205ENST00000597304 NRXN1Q9ULB1 1477 aa15.84■□□□□ 0.13
ZNF558-205ENST00000597304 CHD1O14646 1710 aa15.84■□□□□ 0.13
ZNF558-205ENST00000597304 AFAP1Q8N556 730 aa15.84■□□□□ 0.13
ZNF558-205ENST00000597304 SLC12A5Q9H2X9 1139 aa15.84■□□□□ 0.13
ZNF558-205ENST00000597304 ESPNB1AK53 854 aa15.83■□□□□ 0.13
ZNF558-205ENST00000597304 ITPRIPQ8IWB1 547 aa15.83■□□□□ 0.12
ZNF558-205ENST00000597304 RRP9O43818 475 aaKnown RBP15.82■□□□□ 0.12
ZNF558-205ENST00000597304 TRIM27P14373 513 aa15.82■□□□□ 0.12
ZNF558-205ENST00000597304 DDIT3P35638 169 aa15.82■□□□□ 0.12
ZNF558-205ENST00000597304 HSP90AA2PQ14568 343 aaPredicted RBP15.82■□□□□ 0.12
ZNF558-205ENST00000597304 RBM25P49756 843 aaKnown RBP15.82■□□□□ 0.12
ZNF558-205ENST00000597304 SMC5Q8IY18 1101 aa15.82■□□□□ 0.12
ZNF558-205ENST00000597304 SNX21Q969T3 373 aa15.82■□□□□ 0.12
ZNF558-205ENST00000597304 ATP7AQ04656 1500 aa15.82■□□□□ 0.12
ZNF558-205ENST00000597304 U2AF1L5P0DN76 240 aaPredicted RBP15.81■□□□□ 0.12
ZNF558-205ENST00000597304 U2AF1Q01081 240 aaKnown RBP eCLIP15.81■□□□□ 0.12
ZNF558-205ENST00000597304 TRIM44Q96DX7 344 aaPredicted RBP15.81■□□□□ 0.12
ZNF558-205ENST00000597304 INO80Q9ULG1 1556 aaPredicted RBP15.81■□□□□ 0.12
ZNF558-205ENST00000597304 TSR2Q969E8 191 aaKnown RBP15.81■□□□□ 0.12
ZNF558-205ENST00000597304 GBP4Q96PP9 640 aa15.81■□□□□ 0.12
ZNF558-205ENST00000597304 CIZ1Q9ULV3 898 aaPredicted RBP15.81■□□□□ 0.12
ZNF558-205ENST00000597304 ERCC6L2Q5T890 1561 aa15.8■□□□□ 0.12
ZNF558-205ENST00000597304 KIF3BO15066 747 aa15.8■□□□□ 0.12
ZNF558-205ENST00000597304 ATF7IPQ6VMQ6 1270 aa15.8■□□□□ 0.12
ZNF558-205ENST00000597304 TNPO1Q92973 898 aaKnown RBP15.8■□□□□ 0.12
ZNF558-205ENST00000597304 ARAP3Q8WWN8 1544 aa15.8■□□□□ 0.12
ZNF558-205ENST00000597304 TRAK1Q9UPV9 953 aa15.8■□□□□ 0.12
ZNF558-205ENST00000597304 HSP90AB1P08238 724 aaKnown RBP15.79■□□□□ 0.12
ZNF558-205ENST00000597304 EXOSC9Q06265 439 aaKnown RBP15.79■□□□□ 0.12
ZNF558-205ENST00000597304 MROH1Q8NDA8 1641 aa15.79■□□□□ 0.12
ZNF558-205ENST00000597304 EFCAB6Q5THR3 1501 aa15.79■□□□□ 0.12
ZNF558-205ENST00000597304 NOS1P29475 1434 aa15.79■□□□□ 0.12
ZNF558-205ENST00000597304 ERBB4Q15303 1308 aa15.79■□□□□ 0.12
ZNF558-205ENST00000597304 PTMSP20962 102 aa15.79■□□□□ 0.12
ZNF558-205ENST00000597304 SKOR2Q2VWA4 1001 aaPredicted RBP15.78■□□□□ 0.12
ZNF558-205ENST00000597304 SSH1Q8WYL5 1049 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms