RNA–Protein interactions for RNA: ENST00000596962.5

PGPEP1-205, Transcript of pyroglutamyl-peptidase I, humanhuman

TSL 1 (best)

Gene PGPEP1, Length 1,237 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGPEP1-205ENST00000596962 PTCH1Q13635 1447 aa20.27■□□□□ 0.83
PGPEP1-205ENST00000596962 C14orf37Q86TY3 774 aa20.26■□□□□ 0.83
PGPEP1-205ENST00000596962 TRAK1Q9UPV9 953 aa20.26■□□□□ 0.83
PGPEP1-205ENST00000596962 TECPR2O15040 1411 aa20.26■□□□□ 0.83
PGPEP1-205ENST00000596962 EIF4G2P78344 907 aaKnown RBP eCLIP20.25■□□□□ 0.83
PGPEP1-205ENST00000596962 ROBO2Q9HCK4 1378 aa20.24■□□□□ 0.83
PGPEP1-205ENST00000596962 DCCP43146 1447 aa20.24■□□□□ 0.83
PGPEP1-205ENST00000596962 PHLPP1O60346 1717 aa20.23■□□□□ 0.83
PGPEP1-205ENST00000596962 SLC24A1O60721 1099 aa20.23■□□□□ 0.83
PGPEP1-205ENST00000596962 CADPS2Q86UW7 1296 aa20.23■□□□□ 0.83
PGPEP1-205ENST00000596962 ADGRL3Q9HAR2 1447 aa20.23■□□□□ 0.83
PGPEP1-205ENST00000596962 SLAIN2Q9P270 581 aa20.23■□□□□ 0.83
PGPEP1-205ENST00000596962 DLC1Q96QB1 1528 aa20.22■□□□□ 0.83
PGPEP1-205ENST00000596962 USP47Q96K76 1375 aa20.22■□□□□ 0.83
PGPEP1-205ENST00000596962 SOCS7O14512 581 aa20.22■□□□□ 0.83
PGPEP1-205ENST00000596962 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
PGPEP1-205ENST00000596962 C19orf44Q9H6X5 657 aa20.22■□□□□ 0.83
PGPEP1-205ENST00000596962 POGKQ9P215 609 aa20.22■□□□□ 0.83
PGPEP1-205ENST00000596962 PRAM1Q96QH2 718 aa20.2■□□□□ 0.82
PGPEP1-205ENST00000596962 CENPJQ9HC77 1338 aaPredicted RBP20.2■□□□□ 0.82
PGPEP1-205ENST00000596962 ATF3P18847 181 aa20.19■□□□□ 0.82
PGPEP1-205ENST00000596962 COL16A1Q07092 1604 aaPredicted RBP20.19■□□□□ 0.82
PGPEP1-205ENST00000596962 MST1RQ04912 1400 aa20.19■□□□□ 0.82
PGPEP1-205ENST00000596962 AHDC1Q5TGY3 1603 aaPredicted RBP20.16■□□□□ 0.82
PGPEP1-205ENST00000596962 ST20-MTHFSA0A0A6YYL1 179 aa20.16■□□□□ 0.82
PGPEP1-205ENST00000596962 HSPA5P11021 654 aaKnown RBP20.16■□□□□ 0.82
PGPEP1-205ENST00000596962 NHSL1Q5SYE7 1610 aa20.16■□□□□ 0.82
PGPEP1-205ENST00000596962 WAPLQ7Z5K2 1190 aa20.15■□□□□ 0.82
PGPEP1-205ENST00000596962 CDC42BPGQ6DT37 1551 aa20.14■□□□□ 0.81
PGPEP1-205ENST00000596962 SBNO2Q9Y2G9 1366 aa20.14■□□□□ 0.81
PGPEP1-205ENST00000596962 JCADQ9P266 1359 aa20.13■□□□□ 0.81
PGPEP1-205ENST00000596962 PLEKHH1Q9ULM0 1364 aa20.12■□□□□ 0.81
PGPEP1-205ENST00000596962 SAFB2Q14151 953 aaKnown RBP eCLIP20.11■□□□□ 0.81
PGPEP1-205ENST00000596962 TESK2Q96S53 571 aa20.1■□□□□ 0.81
PGPEP1-205ENST00000596962 FMN2Q9NZ56 1722 aa20.1■□□□□ 0.81
PGPEP1-205ENST00000596962 SHPRHQ149N8 1683 aa20.09■□□□□ 0.81
PGPEP1-205ENST00000596962 C1orf167Q5SNV9 1468 aa20.08■□□□□ 0.81
PGPEP1-205ENST00000596962 TMF1P82094 1093 aa20.08■□□□□ 0.81
PGPEP1-205ENST00000596962 CDCA8Q53HL2 280 aa20.08■□□□□ 0.81
PGPEP1-205ENST00000596962 BRINP3Q76B58 766 aa20.08■□□□□ 0.81
PGPEP1-205ENST00000596962 ARHGEF28Q8N1W1 1705 aaKnown RBP20.07■□□□□ 0.8
PGPEP1-205ENST00000596962 EVC2Q86UK5 1308 aa20.07■□□□□ 0.8
PGPEP1-205ENST00000596962 MINK1Q8N4C8 1332 aaPredicted RBP20.07■□□□□ 0.8
PGPEP1-205ENST00000596962 PUS7Q96PZ0 661 aaKnown RBP20.06■□□□□ 0.8
PGPEP1-205ENST00000596962 RGPD8O14715 1765 aaPredicted RBP20.05■□□□□ 0.8
PGPEP1-205ENST00000596962 SPATA31A6Q5VVP1 1343 aa20.04■□□□□ 0.8
PGPEP1-205ENST00000596962 WASLO00401 505 aaPredicted RBP20.04■□□□□ 0.8
PGPEP1-205ENST00000596962 HIRIP3Q9BW71 556 aaPredicted RBP20.04■□□□□ 0.8
PGPEP1-205ENST00000596962 ADGRB2O60241 1585 aa20.02■□□□□ 0.8
PGPEP1-205ENST00000596962 CDK19Q9BWU1 502 aa20.01■□□□□ 0.79
PGPEP1-205ENST00000596962 USP32Q8NFA0 1604 aa19.99■□□□□ 0.79
PGPEP1-205ENST00000596962 SRPK2P78362 688 aaKnown RBP19.99■□□□□ 0.79
PGPEP1-205ENST00000596962 DDX17Q92841 729 aaKnown RBP19.99■□□□□ 0.79
PGPEP1-205ENST00000596962 RGS17Q9UGC6 210 aaPredicted RBP19.99■□□□□ 0.79
PGPEP1-205ENST00000596962 LRP6O75581 1613 aa19.98■□□□□ 0.79
PGPEP1-205ENST00000596962 ORAI2Q96SN7 254 aa19.98■□□□□ 0.79
PGPEP1-205ENST00000596962 KIF1AQ12756 1690 aa19.97■□□□□ 0.79
PGPEP1-205ENST00000596962 QRICH2Q9H0J4 1663 aa19.97■□□□□ 0.79
PGPEP1-205ENST00000596962 ATAD2Q6PL18 1390 aa19.96■□□□□ 0.79
PGPEP1-205ENST00000596962 ZNF316A6NFI3 1004 aaPredicted RBP19.96■□□□□ 0.79
PGPEP1-205ENST00000596962 ANKARQ7Z5J8 1434 aa19.95■□□□□ 0.78
PGPEP1-205ENST00000596962 CABP2Q9NPB3 220 aa19.95■□□□□ 0.78
PGPEP1-205ENST00000596962 NUDT16Q96DE0 195 aaKnown RBP19.94■□□□□ 0.78
PGPEP1-205ENST00000596962 TULP4Q9NRJ4 1543 aa19.93■□□□□ 0.78
PGPEP1-205ENST00000596962 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
PGPEP1-205ENST00000596962 MEX3CQ5U5Q3 659 aaKnown RBP19.93■□□□□ 0.78
PGPEP1-205ENST00000596962 LRRC59Q96AG4 307 aaKnown RBP19.93■□□□□ 0.78
PGPEP1-205ENST00000596962 CCDC61Q9Y6R9 512 aa19.93■□□□□ 0.78
PGPEP1-205ENST00000596962 PXDNQ92626 1479 aa19.92■□□□□ 0.78
PGPEP1-205ENST00000596962 C11orf95C9JLR9 678 aaPredicted RBP19.92■□□□□ 0.78
PGPEP1-205ENST00000596962 KIF7Q2M1P5 1343 aa19.92■□□□□ 0.78
PGPEP1-205ENST00000596962 NINLQ9Y2I6 1382 aa19.92■□□□□ 0.78
PGPEP1-205ENST00000596962 PNPLA6Q8IY17 1366 aa19.9■□□□□ 0.78
PGPEP1-205ENST00000596962 CCDC7Q96M83 1385 aa19.9■□□□□ 0.78
PGPEP1-205ENST00000596962 COL22A1Q8NFW1 1626 aaPredicted RBP19.9■□□□□ 0.78
PGPEP1-205ENST00000596962 SOS2Q07890 1332 aaPredicted RBP19.89■□□□□ 0.77
PGPEP1-205ENST00000596962 WASHC2AQ641Q2 1341 aa19.89■□□□□ 0.77
PGPEP1-205ENST00000596962 POTEAQ6S8J7 498 aa19.89■□□□□ 0.77
PGPEP1-205ENST00000596962 POLR3GLQ9BT43 218 aa19.89■□□□□ 0.77
PGPEP1-205ENST00000596962 PRR36Q9H6K5 1346 aa19.88■□□□□ 0.77
PGPEP1-205ENST00000596962 ESCO1Q5FWF5 840 aa19.88■□□□□ 0.77
PGPEP1-205ENST00000596962 PLEKHG3A1L390 1219 aa19.87■□□□□ 0.77
PGPEP1-205ENST00000596962 ZNF772Q68DY9 489 aaPredicted RBP19.87■□□□□ 0.77
PGPEP1-205ENST00000596962 ATP7BP35670 1465 aa19.86■□□□□ 0.77
PGPEP1-205ENST00000596962 ITSN1Q15811 1721 aa19.86■□□□□ 0.77
PGPEP1-205ENST00000596962 TMC1Q8TDI8 760 aa19.86■□□□□ 0.77
PGPEP1-205ENST00000596962 TOPAZ1Q8N9V7 1692 aa19.85■□□□□ 0.77
PGPEP1-205ENST00000596962 CABP1Q9NZU7 370 aa19.85■□□□□ 0.77
PGPEP1-205ENST00000596962 PHF8Q9UPP1 1060 aa19.85■□□□□ 0.77
PGPEP1-205ENST00000596962 NPHP3Q7Z494 1330 aa19.84■□□□□ 0.77
PGPEP1-205ENST00000596962 NUTM2BA6NNL0 878 aaPredicted RBP19.84■□□□□ 0.77
PGPEP1-205ENST00000596962 NUTM2EB1AL46 878 aaPredicted RBP19.84■□□□□ 0.77
PGPEP1-205ENST00000596962 NUTM2AQ8IVF1 878 aaPredicted RBP19.84■□□□□ 0.77
PGPEP1-205ENST00000596962 TERF2IPQ9NYB0 399 aa19.84■□□□□ 0.77
PGPEP1-205ENST00000596962 PPIP5K1Q6PFW1 1433 aa19.84■□□□□ 0.77
PGPEP1-205ENST00000596962 TRPM3Q9HCF6 1732 aaPredicted RBP19.83■□□□□ 0.77
PGPEP1-205ENST00000596962 XPCQ01831 940 aaPredicted RBP19.83■□□□□ 0.77
PGPEP1-205ENST00000596962 ZNF692Q9BU19 519 aaPredicted RBP19.83■□□□□ 0.77
PGPEP1-205ENST00000596962 MARF1Q9Y4F3 1742 aaKnown RBP19.82■□□□□ 0.76
PGPEP1-205ENST00000596962 FOXO3O43524 673 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms