RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 SOCS7O14512 581 aa12.27□□□□□ -0.45
SNRPA-202ENST00000596860 TMF1P82094 1093 aa12.27□□□□□ -0.45
SNRPA-202ENST00000596860 ROBO2Q9HCK4 1378 aa12.27□□□□□ -0.45
SNRPA-202ENST00000596860 PRAM1Q96QH2 718 aa12.25□□□□□ -0.45
SNRPA-202ENST00000596860 POGKQ9P215 609 aa12.25□□□□□ -0.45
SNRPA-202ENST00000596860 STK26Q9P289 416 aa12.25□□□□□ -0.45
SNRPA-202ENST00000596860 STRCP1A6NGW2 1772 aa12.25□□□□□ -0.45
SNRPA-202ENST00000596860 EVC2Q86UK5 1308 aa12.24□□□□□ -0.45
SNRPA-202ENST00000596860 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.23□□□□□ -0.45
SNRPA-202ENST00000596860 CDC42BPGQ6DT37 1551 aa12.23□□□□□ -0.45
SNRPA-202ENST00000596860 NINLQ9Y2I6 1382 aa12.23□□□□□ -0.45
SNRPA-202ENST00000596860 TULP4Q9NRJ4 1543 aa12.22□□□□□ -0.45
SNRPA-202ENST00000596860 DCCP43146 1447 aa12.22□□□□□ -0.45
SNRPA-202ENST00000596860 ADGRL3Q9HAR2 1447 aa12.22□□□□□ -0.45
SNRPA-202ENST00000596860 CCDC7Q96M83 1385 aa12.22□□□□□ -0.45
SNRPA-202ENST00000596860 ATAD2Q6PL18 1390 aa12.21□□□□□ -0.45
SNRPA-202ENST00000596860 PLEKHH1Q9ULM0 1364 aa12.21□□□□□ -0.45
SNRPA-202ENST00000596860 ILDR2Q71H61 639 aa12.21□□□□□ -0.45
SNRPA-202ENST00000596860 NALCNQ8IZF0 1738 aa12.2□□□□□ -0.46
SNRPA-202ENST00000596860 KIF7Q2M1P5 1343 aa12.2□□□□□ -0.46
SNRPA-202ENST00000596860 ZNF335Q9H4Z2 1342 aaPredicted RBP12.2□□□□□ -0.46
SNRPA-202ENST00000596860 WAPLQ7Z5K2 1190 aa12.2□□□□□ -0.46
SNRPA-202ENST00000596860 ITSN1Q15811 1721 aa12.2□□□□□ -0.46
SNRPA-202ENST00000596860 FMN2Q9NZ56 1722 aa12.2□□□□□ -0.46
SNRPA-202ENST00000596860 ANKARQ7Z5J8 1434 aa12.2□□□□□ -0.46
SNRPA-202ENST00000596860 WASHC2AQ641Q2 1341 aa12.19□□□□□ -0.46
SNRPA-202ENST00000596860 WASLO00401 505 aaPredicted RBP12.19□□□□□ -0.46
SNRPA-202ENST00000596860 XIRP1Q702N8 1843 aaKnown RBP12.18□□□□□ -0.46
SNRPA-202ENST00000596860 LRRC7Q96NW7 1537 aa12.18□□□□□ -0.46
SNRPA-202ENST00000596860 UBAP1LF5GYI3 381 aa12.18□□□□□ -0.46
SNRPA-202ENST00000596860 PROSER2Q86WR7 435 aaPredicted RBP12.18□□□□□ -0.46
SNRPA-202ENST00000596860 MYOM1P52179 1685 aa12.17□□□□□ -0.46
SNRPA-202ENST00000596860 TOPAZ1Q8N9V7 1692 aa12.17□□□□□ -0.46
SNRPA-202ENST00000596860 C11orf95C9JLR9 678 aaPredicted RBP12.17□□□□□ -0.46
SNRPA-202ENST00000596860 HIRIP3Q9BW71 556 aaPredicted RBP12.17□□□□□ -0.46
SNRPA-202ENST00000596860 C19orf44Q9H6X5 657 aa12.17□□□□□ -0.46
SNRPA-202ENST00000596860 TMEM94Q12767 1356 aa12.17□□□□□ -0.46
SNRPA-202ENST00000596860 ATP7BP35670 1465 aa12.15□□□□□ -0.46
SNRPA-202ENST00000596860 MINK1Q8N4C8 1332 aaPredicted RBP12.15□□□□□ -0.46
SNRPA-202ENST00000596860 TOM1O60784 492 aa12.15□□□□□ -0.46
SNRPA-202ENST00000596860 CDK19Q9BWU1 502 aa12.15□□□□□ -0.46
SNRPA-202ENST00000596860 MSH6P52701 1360 aa12.14□□□□□ -0.47
SNRPA-202ENST00000596860 USP32Q8NFA0 1604 aa12.14□□□□□ -0.47
SNRPA-202ENST00000596860 SAFB2Q14151 953 aaKnown RBP eCLIP12.13□□□□□ -0.47
SNRPA-202ENST00000596860 CADPS2Q86UW7 1296 aa12.13□□□□□ -0.47
SNRPA-202ENST00000596860 CCDC61Q9Y6R9 512 aa12.13□□□□□ -0.47
SNRPA-202ENST00000596860 SRPK2P78362 688 aaKnown RBP12.12□□□□□ -0.47
SNRPA-202ENST00000596860 BRD4O60885 1362 aaPredicted RBP12.12□□□□□ -0.47
SNRPA-202ENST00000596860 ANKRD36BQ8N2N9 1353 aa12.12□□□□□ -0.47
SNRPA-202ENST00000596860 KIF1AQ12756 1690 aa12.12□□□□□ -0.47
SNRPA-202ENST00000596860 AKAP12Q02952 1782 aa12.12□□□□□ -0.47
SNRPA-202ENST00000596860 PLEKHG3A1L390 1219 aa12.11□□□□□ -0.47
SNRPA-202ENST00000596860 NUDT16Q96DE0 195 aaKnown RBP12.11□□□□□ -0.47
SNRPA-202ENST00000596860 NPC1L1Q9UHC9 1359 aa12.1□□□□□ -0.47
SNRPA-202ENST00000596860 CABP2Q9NPB3 220 aa12.1□□□□□ -0.47
SNRPA-202ENST00000596860 RGPD8O14715 1765 aaPredicted RBP12.1□□□□□ -0.47
SNRPA-202ENST00000596860 MON2Q7Z3U7 1717 aa12.09□□□□□ -0.47
SNRPA-202ENST00000596860 POLR3AO14802 1390 aaPredicted RBP12.09□□□□□ -0.47
SNRPA-202ENST00000596860 ATF3P18847 181 aa12.09□□□□□ -0.47
SNRPA-202ENST00000596860 C14orf37Q86TY3 774 aa12.09□□□□□ -0.47
SNRPA-202ENST00000596860 ZNF692Q9BU19 519 aaPredicted RBP12.09□□□□□ -0.47
SNRPA-202ENST00000596860 TERF2IPQ9NYB0 399 aa12.09□□□□□ -0.47
SNRPA-202ENST00000596860 MST1RQ04912 1400 aa12.09□□□□□ -0.47
SNRPA-202ENST00000596860 CPSF1Q10570 1443 aaKnown RBP12.09□□□□□ -0.47
SNRPA-202ENST00000596860 PPIP5K1Q6PFW1 1433 aa12.09□□□□□ -0.47
SNRPA-202ENST00000596860 PRR36Q9H6K5 1346 aa12.09□□□□□ -0.47
SNRPA-202ENST00000596860 C1orf167Q5SNV9 1468 aa12.08□□□□□ -0.48
SNRPA-202ENST00000596860 CD163L1Q9NR16 1453 aa12.08□□□□□ -0.48
SNRPA-202ENST00000596860 KTN1Q86UP2 1357 aaKnown RBP12.07□□□□□ -0.48
SNRPA-202ENST00000596860 NSD2O96028 1365 aa12.06□□□□□ -0.48
SNRPA-202ENST00000596860 PER1O15534 1290 aaPredicted RBP12.06□□□□□ -0.48
SNRPA-202ENST00000596860 DDX10Q13206 875 aaKnown RBP12.06□□□□□ -0.48
SNRPA-202ENST00000596860 HDGFL2Q7Z4V5 671 aaPredicted RBP12.06□□□□□ -0.48
SNRPA-202ENST00000596860 MED1Q15648 1581 aaPredicted RBP12.05□□□□□ -0.48
SNRPA-202ENST00000596860 HSPA1LP34931 641 aa12.05□□□□□ -0.48
SNRPA-202ENST00000596860 SLC12A5Q9H2X9 1139 aa12.05□□□□□ -0.48
SNRPA-202ENST00000596860 PANK3Q9H999 370 aa12.05□□□□□ -0.48
SNRPA-202ENST00000596860 CABP1Q9NZU7 370 aa12.05□□□□□ -0.48
SNRPA-202ENST00000596860 NRKQ7Z2Y5 1582 aa12.05□□□□□ -0.48
SNRPA-202ENST00000596860 A0A1W2PP64 1363 aa12.05□□□□□ -0.48
SNRPA-202ENST00000596860 EDC4Q6P2E9 1401 aaKnown RBP12.04□□□□□ -0.48
SNRPA-202ENST00000596860 TMC1Q8TDI8 760 aa12.04□□□□□ -0.48
SNRPA-202ENST00000596860 POLR3GLQ9BT43 218 aa12.04□□□□□ -0.48
SNRPA-202ENST00000596860 ANKRD26Q9UPS8 1709 aa12.03□□□□□ -0.48
SNRPA-202ENST00000596860 DIEXFQ68CQ4 756 aaKnown RBP12.03□□□□□ -0.48
SNRPA-202ENST00000596860 PHF8Q9UPP1 1060 aa12.03□□□□□ -0.48
SNRPA-202ENST00000596860 KNSTRNQ9Y448 316 aa12.03□□□□□ -0.48
SNRPA-202ENST00000596860 USP54Q70EL1 1684 aa12.03□□□□□ -0.48
SNRPA-202ENST00000596860 USP6P35125 1406 aa12.03□□□□□ -0.48
SNRPA-202ENST00000596860 SSH2Q76I76 1423 aa12.03□□□□□ -0.48
SNRPA-202ENST00000596860 ACEP12821 1306 aa12.02□□□□□ -0.49
SNRPA-202ENST00000596860 TTC21AQ8NDW8 1320 aa12.02□□□□□ -0.49
SNRPA-202ENST00000596860 KIF20BQ96Q89 1820 aa12.02□□□□□ -0.49
SNRPA-202ENST00000596860 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
SNRPA-202ENST00000596860 RBM33Q96EV2 1170 aaKnown RBP12.01□□□□□ -0.49
SNRPA-202ENST00000596860 SLAIN2Q9P270 581 aa12.01□□□□□ -0.49
SNRPA-202ENST00000596860 CGNL1Q0VF96 1302 aa12.01□□□□□ -0.49
SNRPA-202ENST00000596860 SCAF1Q9H7N4 1312 aaKnown RBP12.01□□□□□ -0.49
SNRPA-202ENST00000596860 NSD3Q9BZ95 1437 aa12.01□□□□□ -0.49
SNRPA-202ENST00000596860 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms