RNA–Protein interactions for RNA: ENST00000596809.5

C19orf54-205, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5

Gene C19orf54, Length 1,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-205ENST00000596809 DHX57Q6P158 1386 aaKnown RBP31.56■■■□□ 2.64
C19orf54-205ENST00000596809 PLEKHH1Q9ULM0 1364 aa31.56■■■□□ 2.64
C19orf54-205ENST00000596809 DCAF11Q8TEB1 546 aa31.55■■■□□ 2.64
C19orf54-205ENST00000596809 KDM2AQ9Y2K7 1162 aa31.55■■■□□ 2.64
C19orf54-205ENST00000596809 NHSL1Q5SYE7 1610 aa31.54■■■□□ 2.64
C19orf54-205ENST00000596809 MEX3CQ5U5Q3 659 aaKnown RBP31.54■■■□□ 2.64
C19orf54-205ENST00000596809 LRP6O75581 1613 aa31.53■■■□□ 2.64
C19orf54-205ENST00000596809 SHPRHQ149N8 1683 aa31.52■■■□□ 2.64
C19orf54-205ENST00000596809 NUTM2BA6NNL0 878 aaPredicted RBP31.52■■■□□ 2.64
C19orf54-205ENST00000596809 NUTM2EB1AL46 878 aaPredicted RBP31.52■■■□□ 2.64
C19orf54-205ENST00000596809 NUTM2AQ8IVF1 878 aaPredicted RBP31.52■■■□□ 2.64
C19orf54-205ENST00000596809 CDC42BPGQ6DT37 1551 aa31.51■■■□□ 2.63
C19orf54-205ENST00000596809 ESCO1Q5FWF5 840 aa31.5■■■□□ 2.63
C19orf54-205ENST00000596809 STAC3Q96MF2 364 aa31.5■■■□□ 2.63
C19orf54-205ENST00000596809 KNDC1Q76NI1 1749 aa31.48■■■□□ 2.63
C19orf54-205ENST00000596809 SOS2Q07890 1332 aaPredicted RBP31.48■■■□□ 2.63
C19orf54-205ENST00000596809 NUTM2FA1L443 756 aa31.47■■■□□ 2.63
C19orf54-205ENST00000596809 LAMC1P11047 1609 aa31.46■■■□□ 2.63
C19orf54-205ENST00000596809 PNPLA6Q8IY17 1366 aa31.45■■■□□ 2.63
C19orf54-205ENST00000596809 PRAM1Q96QH2 718 aa31.44■■■□□ 2.62
C19orf54-205ENST00000596809 ZNF772Q68DY9 489 aaPredicted RBP31.41■■■□□ 2.62
C19orf54-205ENST00000596809 NPHP3Q7Z494 1330 aa31.41■■■□□ 2.62
C19orf54-205ENST00000596809 FOXO3O43524 673 aa31.4■■■□□ 2.62
C19orf54-205ENST00000596809 SAFB2Q14151 953 aaKnown RBP eCLIP31.4■■■□□ 2.62
C19orf54-205ENST00000596809 POGKQ9P215 609 aa31.4■■■□□ 2.62
C19orf54-205ENST00000596809 TRAK1Q9UPV9 953 aa31.38■■■□□ 2.61
C19orf54-205ENST00000596809 ADGRB1O14514 1584 aa31.38■■■□□ 2.61
C19orf54-205ENST00000596809 DLC1Q96QB1 1528 aa31.35■■■□□ 2.61
C19orf54-205ENST00000596809 XPCQ01831 940 aaPredicted RBP31.34■■■□□ 2.61
C19orf54-205ENST00000596809 AFF2P51816 1311 aa31.31■■■□□ 2.6
C19orf54-205ENST00000596809 C8orf37Q96NL8 207 aa31.31■■■□□ 2.6
C19orf54-205ENST00000596809 FMN2Q9NZ56 1722 aa31.31■■■□□ 2.6
C19orf54-205ENST00000596809 PXDNQ92626 1479 aa31.31■■■□□ 2.6
C19orf54-205ENST00000596809 ADAMTS2O95450 1211 aa31.3■■■□□ 2.6
C19orf54-205ENST00000596809 PHF8Q9UPP1 1060 aa31.27■■■□□ 2.6
C19orf54-205ENST00000596809 NGLY1Q96IV0 654 aa31.25■■■□□ 2.59
C19orf54-205ENST00000596809 HIRIP3Q9BW71 556 aaPredicted RBP31.25■■■□□ 2.59
C19orf54-205ENST00000596809 MINK1Q8N4C8 1332 aaPredicted RBP31.24■■■□□ 2.59
C19orf54-205ENST00000596809 RXRBP28702 533 aa31.24■■■□□ 2.59
C19orf54-205ENST00000596809 KRT28Q7Z3Y7 464 aa31.24■■■□□ 2.59
C19orf54-205ENST00000596809 SPATA31A3Q5VYP0 1347 aa31.2■■■□□ 2.58
C19orf54-205ENST00000596809 KIF1AQ12756 1690 aa31.19■■■□□ 2.58
C19orf54-205ENST00000596809 QTRT2Q9H974 415 aaKnown RBP31.19■■■□□ 2.58
C19orf54-205ENST00000596809 ANKARQ7Z5J8 1434 aa31.18■■■□□ 2.58
C19orf54-205ENST00000596809 COL22A1Q8NFW1 1626 aaPredicted RBP31.18■■■□□ 2.58
C19orf54-205ENST00000596809 WASLO00401 505 aaPredicted RBP31.18■■■□□ 2.58
C19orf54-205ENST00000596809 PSME1Q06323 249 aa31.18■■■□□ 2.58
C19orf54-205ENST00000596809 ADGRB2O60241 1585 aa31.17■■■□□ 2.58
C19orf54-205ENST00000596809 PMFBP1Q8TBY8 1022 aa31.17■■■□□ 2.58
C19orf54-205ENST00000596809 SIN3AQ96ST3 1273 aa31.16■■■□□ 2.58
C19orf54-205ENST00000596809 NBPF1Q3BBV0 1214 aa31.15■■■□□ 2.58
C19orf54-205ENST00000596809 FNBP4Q8N3X1 1017 aaPredicted RBP31.14■■■□□ 2.58
C19orf54-205ENST00000596809 L3MBTL2Q969R5 705 aa31.14■■■□□ 2.58
C19orf54-205ENST00000596809 EIF3AQ14152 1382 aaKnown RBP31.14■■■□□ 2.58
C19orf54-205ENST00000596809 RGPD8O14715 1765 aaPredicted RBP31.13■■■□□ 2.57
C19orf54-205ENST00000596809 USP21Q9UK80 565 aa31.13■■■□□ 2.57
C19orf54-205ENST00000596809 PRR36Q9H6K5 1346 aa31.12■■■□□ 2.57
C19orf54-205ENST00000596809 RBM6P78332 1123 aaKnown RBP31.11■■■□□ 2.57
C19orf54-205ENST00000596809 USP32Q8NFA0 1604 aa31.11■■■□□ 2.57
C19orf54-205ENST00000596809 NEUROD1Q13562 356 aa31.1■■■□□ 2.57
C19orf54-205ENST00000596809 SBNO1A3KN83 1393 aa31.09■■■□□ 2.57
C19orf54-205ENST00000596809 KIAA1210Q9ULL0 1709 aa31.08■■■□□ 2.57
C19orf54-205ENST00000596809 TULP4Q9NRJ4 1543 aa31.08■■■□□ 2.57
C19orf54-205ENST00000596809 CDK12Q9NYV4 1490 aaPredicted RBP31.08■■■□□ 2.57
C19orf54-205ENST00000596809 TNS3Q68CZ2 1445 aa31.07■■■□□ 2.57
C19orf54-205ENST00000596809 ARHGEF28Q8N1W1 1705 aaKnown RBP31.07■■■□□ 2.56
C19orf54-205ENST00000596809 LMOD2Q6P5Q4 547 aa31.06■■■□□ 2.56
C19orf54-205ENST00000596809 TRPC5Q9UL62 973 aaPredicted RBP31.06■■■□□ 2.56
C19orf54-205ENST00000596809 NUDT16Q96DE0 195 aaKnown RBP31.04■■■□□ 2.56
C19orf54-205ENST00000596809 CDK19Q9BWU1 502 aa31.04■■■□□ 2.56
C19orf54-205ENST00000596809 GPRASP1Q5JY77 1395 aa31.03■■■□□ 2.56
C19orf54-205ENST00000596809 NGDNQ8NEJ9 315 aaKnown RBP31.02■■■□□ 2.56
C19orf54-205ENST00000596809 CABLES1Q8TDN4 633 aa31.02■■■□□ 2.56
C19orf54-205ENST00000596809 ARHGEF10O15013 1369 aa31.02■■■□□ 2.56
C19orf54-205ENST00000596809 PLEKHG5O94827 1062 aa31.01■■■□□ 2.55
C19orf54-205ENST00000596809 HAP1P54257 671 aaPredicted RBP31.01■■■□□ 2.55
C19orf54-205ENST00000596809 TRIM26Q12899 539 aaPredicted RBP30.99■■■□□ 2.55
C19orf54-205ENST00000596809 BCL9LQ86UU0 1499 aa30.99■■■□□ 2.55
C19orf54-205ENST00000596809 RGS12O14924 1447 aa30.97■■■□□ 2.55
C19orf54-205ENST00000596809 ATRNO75882 1429 aa30.97■■■□□ 2.55
C19orf54-205ENST00000596809 CENPJQ9HC77 1338 aaPredicted RBP30.97■■■□□ 2.55
C19orf54-205ENST00000596809 ATP7BP35670 1465 aa30.96■■■□□ 2.55
C19orf54-205ENST00000596809 UPF1Q92900 1129 aaKnown RBP eCLIP30.95■■■□□ 2.559e-12■■■■□ 25.6
C19orf54-205ENST00000596809 CCDC61Q9Y6R9 512 aa30.94■■■□□ 2.54
C19orf54-205ENST00000596809 UNC5CLQ8IV45 518 aa30.93■■■□□ 2.54
C19orf54-205ENST00000596809 MARF1Q9Y4F3 1742 aaKnown RBP30.93■■■□□ 2.54
C19orf54-205ENST00000596809 PAK3O75914 559 aaPredicted RBP30.92■■■□□ 2.54
C19orf54-205ENST00000596809 SLIT2O94813 1529 aa30.91■■■□□ 2.54
C19orf54-205ENST00000596809 GJD4Q96KN9 370 aaPredicted RBP30.9■■■□□ 2.54
C19orf54-205ENST00000596809 SRPK2P78362 688 aaKnown RBP30.89■■■□□ 2.54
C19orf54-205ENST00000596809 TRPM3Q9HCF6 1732 aaPredicted RBP30.89■■■□□ 2.54
C19orf54-205ENST00000596809 PLEKHG3A1L390 1219 aa30.88■■■□□ 2.53
C19orf54-205ENST00000596809 NBPF8Q3BBV2 869 aa30.87■■■□□ 2.53
C19orf54-205ENST00000596809 ACEP12821 1306 aa30.87■■■□□ 2.53
C19orf54-205ENST00000596809 FAM83GA6ND36 823 aa30.86■■■□□ 2.53
C19orf54-205ENST00000596809 ROCK2O75116 1388 aaKnown RBP30.86■■■□□ 2.53
C19orf54-205ENST00000596809 POLR3AO14802 1390 aaPredicted RBP30.85■■■□□ 2.53
C19orf54-205ENST00000596809 CABP2Q9NPB3 220 aa30.85■■■□□ 2.53
C19orf54-205ENST00000596809 ITSN1Q15811 1721 aa30.84■■■□□ 2.53
C19orf54-205ENST00000596809 ALS2Q96Q42 1657 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms