RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ARHGEF28Q8N1W1 1705 aaKnown RBP27.51■■□□□ 1.99
PNKP-207ENST00000596014 SAFB2Q14151 953 aaKnown RBP eCLIP27.49■■□□□ 1.99
PNKP-207ENST00000596014 ATF3P18847 181 aa27.47■■□□□ 1.99
PNKP-207ENST00000596014 FBXO41Q8TF61 875 aa27.47■■□□□ 1.99
PNKP-207ENST00000596014 CARD11Q9BXL7 1154 aa27.47■■□□□ 1.99
PNKP-207ENST00000596014 CADPS2Q86UW7 1296 aa27.46■■□□□ 1.99
PNKP-207ENST00000596014 DCCP43146 1447 aa27.46■■□□□ 1.99
PNKP-207ENST00000596014 SLAIN2Q9P270 581 aa27.42■■□□□ 1.98
PNKP-207ENST00000596014 PIP4K2BP78356 416 aa27.41■■□□□ 1.98
PNKP-207ENST00000596014 CDC42BPGQ6DT37 1551 aa27.4■■□□□ 1.98
PNKP-207ENST00000596014 MINK1Q8N4C8 1332 aaPredicted RBP27.39■■□□□ 1.98
PNKP-207ENST00000596014 CENPJQ9HC77 1338 aaPredicted RBP27.39■■□□□ 1.98
PNKP-207ENST00000596014 HIRIP3Q9BW71 556 aaPredicted RBP27.37■■□□□ 1.97
PNKP-207ENST00000596014 SCAF1Q9H7N4 1312 aaKnown RBP27.37■■□□□ 1.97
PNKP-207ENST00000596014 EIF3AQ14152 1382 aaKnown RBP27.37■■□□□ 1.97
PNKP-207ENST00000596014 MST1RQ04912 1400 aa27.36■■□□□ 1.97
PNKP-207ENST00000596014 ADGRB2O60241 1585 aa27.35■■□□□ 1.97
PNKP-207ENST00000596014 QRICH2Q9H0J4 1663 aa27.34■■□□□ 1.97
PNKP-207ENST00000596014 FMN2Q9NZ56 1722 aa27.32■■□□□ 1.96
PNKP-207ENST00000596014 NUTM2FA1L443 756 aa27.3■■□□□ 1.96
PNKP-207ENST00000596014 WASLO00401 505 aaPredicted RBP27.3■■□□□ 1.96
PNKP-207ENST00000596014 ROBO1Q9Y6N7 1651 aa27.3■■□□□ 1.96
PNKP-207ENST00000596014 C1orf167Q5SNV9 1468 aa27.3■■□□□ 1.96
PNKP-207ENST00000596014 ILDR1Q86SU0 546 aaPredicted RBP27.3■■□□□ 1.96
PNKP-207ENST00000596014 USP47Q96K76 1375 aa27.27■■□□□ 1.96
PNKP-207ENST00000596014 RGPD8O14715 1765 aaPredicted RBP27.26■■□□□ 1.95
PNKP-207ENST00000596014 ST20-MTHFSA0A0A6YYL1 179 aa27.26■■□□□ 1.95
PNKP-207ENST00000596014 BRINP3Q76B58 766 aa27.26■■□□□ 1.95
PNKP-207ENST00000596014 CDK19Q9BWU1 502 aa27.26■■□□□ 1.95
PNKP-207ENST00000596014 ORAI2Q96SN7 254 aa27.25■■□□□ 1.95
PNKP-207ENST00000596014 SBNO2Q9Y2G9 1366 aa27.23■■□□□ 1.95
PNKP-207ENST00000596014 ESCO1Q5FWF5 840 aa27.23■■□□□ 1.95
PNKP-207ENST00000596014 USP32Q8NFA0 1604 aa27.22■■□□□ 1.95
PNKP-207ENST00000596014 TULP4Q9NRJ4 1543 aa27.21■■□□□ 1.95
PNKP-207ENST00000596014 ANKARQ7Z5J8 1434 aa27.21■■□□□ 1.95
PNKP-207ENST00000596014 EVC2Q86UK5 1308 aa27.2■■□□□ 1.94
PNKP-207ENST00000596014 PRR36Q9H6K5 1346 aa27.2■■□□□ 1.94
PNKP-207ENST00000596014 TESK2Q96S53 571 aa27.19■■□□□ 1.94
PNKP-207ENST00000596014 HSPA1LP34931 641 aa27.18■■□□□ 1.94
PNKP-207ENST00000596014 SRPK2P78362 688 aaKnown RBP27.18■■□□□ 1.94
PNKP-207ENST00000596014 ZEB1P37275 1124 aaPredicted RBP27.17■■□□□ 1.94
PNKP-207ENST00000596014 NUDT16Q96DE0 195 aaKnown RBP27.17■■□□□ 1.94
PNKP-207ENST00000596014 CABP2Q9NPB3 220 aa27.17■■□□□ 1.94
PNKP-207ENST00000596014 EIF4G2P78344 907 aaKnown RBP eCLIP27.16■■□□□ 1.94
PNKP-207ENST00000596014 ATP7BP35670 1465 aa27.15■■□□□ 1.94
PNKP-207ENST00000596014 PHF8Q9UPP1 1060 aa27.14■■□□□ 1.94
PNKP-207ENST00000596014 SLC24A1O60721 1099 aa27.14■■□□□ 1.93
PNKP-207ENST00000596014 DDX17Q92841 729 aaKnown RBP27.13■■□□□ 1.93
PNKP-207ENST00000596014 CCDC61Q9Y6R9 512 aa27.13■■□□□ 1.93
PNKP-207ENST00000596014 NHSL1Q5SYE7 1610 aa27.13■■□□□ 1.93
PNKP-207ENST00000596014 AHDC1Q5TGY3 1603 aaPredicted RBP27.13■■□□□ 1.93
PNKP-207ENST00000596014 PHLPP1O60346 1717 aa27.12■■□□□ 1.93
PNKP-207ENST00000596014 ITSN1Q15811 1721 aa27.12■■□□□ 1.93
PNKP-207ENST00000596014 KIF1AQ12756 1690 aa27.12■■□□□ 1.93
PNKP-207ENST00000596014 FOXO3O43524 673 aa27.11■■□□□ 1.93
PNKP-207ENST00000596014 HSPA5P11021 654 aaKnown RBP27.11■■□□□ 1.93
PNKP-207ENST00000596014 PMFBP1Q8TBY8 1022 aa27.11■■□□□ 1.93
PNKP-207ENST00000596014 TOPAZ1Q8N9V7 1692 aa27.09■■□□□ 1.93
PNKP-207ENST00000596014 NPHP3Q7Z494 1330 aa27.07■■□□□ 1.92
PNKP-207ENST00000596014 COL16A1Q07092 1604 aaPredicted RBP27.06■■□□□ 1.92
PNKP-207ENST00000596014 TMF1P82094 1093 aa27.06■■□□□ 1.92
PNKP-207ENST00000596014 PPIP5K1Q6PFW1 1433 aa27.05■■□□□ 1.92
PNKP-207ENST00000596014 DISP3Q9P2K9 1392 aa27.05■■□□□ 1.92
PNKP-207ENST00000596014 PLEKHG3A1L390 1219 aa27.05■■□□□ 1.92
PNKP-207ENST00000596014 PUS7Q96PZ0 661 aaKnown RBP27.05■■□□□ 1.92
PNKP-207ENST00000596014 SOS2Q07890 1332 aaPredicted RBP27.04■■□□□ 1.92
PNKP-207ENST00000596014 ATAD2Q6PL18 1390 aa27.03■■□□□ 1.92
PNKP-207ENST00000596014 XPCQ01831 940 aaPredicted RBP27.03■■□□□ 1.92
PNKP-207ENST00000596014 NGDNQ8NEJ9 315 aaKnown RBP27.03■■□□□ 1.92
PNKP-207ENST00000596014 CABP1Q9NZU7 370 aa27.03■■□□□ 1.92
PNKP-207ENST00000596014 PSME1Q06323 249 aa27.01■■□□□ 1.92
PNKP-207ENST00000596014 PXDNQ92626 1479 aa27.01■■□□□ 1.91
PNKP-207ENST00000596014 KRT28Q7Z3Y7 464 aa27.01■■□□□ 1.91
PNKP-207ENST00000596014 LRRC59Q96AG4 307 aaKnown RBP27■■□□□ 1.91
PNKP-207ENST00000596014 ACEP12821 1306 aa27■■□□□ 1.91
PNKP-207ENST00000596014 POLR3AO14802 1390 aaPredicted RBP26.99■■□□□ 1.91
PNKP-207ENST00000596014 CDCA8Q53HL2 280 aa26.98■■□□□ 1.91
PNKP-207ENST00000596014 TMC1Q8TDI8 760 aa26.95■■□□□ 1.91
PNKP-207ENST00000596014 JCADQ9P266 1359 aa26.94■■□□□ 1.9
PNKP-207ENST00000596014 SLC12A5Q9H2X9 1139 aa26.94■■□□□ 1.9
PNKP-207ENST00000596014 SBNO1A3KN83 1393 aa26.91■■□□□ 1.9
PNKP-207ENST00000596014 SPATA31A3Q5VYP0 1347 aa26.91■■□□□ 1.9
PNKP-207ENST00000596014 TRPM3Q9HCF6 1732 aaPredicted RBP26.91■■□□□ 1.9
PNKP-207ENST00000596014 SHPRHQ149N8 1683 aa26.9■■□□□ 1.9
PNKP-207ENST00000596014 C11orf95C9JLR9 678 aaPredicted RBP26.89■■□□□ 1.9
PNKP-207ENST00000596014 ZNF692Q9BU19 519 aaPredicted RBP26.89■■□□□ 1.9
PNKP-207ENST00000596014 AKAP12Q02952 1782 aa26.89■■□□□ 1.9
PNKP-207ENST00000596014 PNPLA6Q8IY17 1366 aa26.89■■□□□ 1.89
PNKP-207ENST00000596014 NINLQ9Y2I6 1382 aa26.89■■□□□ 1.89
PNKP-207ENST00000596014 CPSF1Q10570 1443 aaKnown RBP26.88■■□□□ 1.89
PNKP-207ENST00000596014 PAK3O75914 559 aaPredicted RBP26.87■■□□□ 1.89
PNKP-207ENST00000596014 TNS3Q68CZ2 1445 aa26.87■■□□□ 1.89
PNKP-207ENST00000596014 CD163L1Q9NR16 1453 aa26.87■■□□□ 1.89
PNKP-207ENST00000596014 USP6P35125 1406 aa26.86■■□□□ 1.89
PNKP-207ENST00000596014 POLR3GLQ9BT43 218 aa26.85■■□□□ 1.89
PNKP-207ENST00000596014 LMOD2Q6P5Q4 547 aa26.85■■□□□ 1.89
PNKP-207ENST00000596014 TERF2IPQ9NYB0 399 aa26.85■■□□□ 1.89
PNKP-207ENST00000596014 HDGFL2Q7Z4V5 671 aaPredicted RBP26.84■■□□□ 1.89
PNKP-207ENST00000596014 ALS2Q96Q42 1657 aa26.84■■□□□ 1.89
PNKP-207ENST00000596014 BRD4O60885 1362 aaPredicted RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms