RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 TULP4Q9NRJ4 1543 aa20.32■□□□□ 0.84
GTF2F1-202ENST00000593678 TECPR2O15040 1411 aa20.32■□□□□ 0.84
GTF2F1-202ENST00000593678 FAM135BQ49AJ0 1406 aa20.32■□□□□ 0.84
GTF2F1-202ENST00000593678 PER1O15534 1290 aaPredicted RBP20.31■□□□□ 0.84
GTF2F1-202ENST00000593678 MED14O60244 1454 aa20.31■□□□□ 0.84
GTF2F1-202ENST00000593678 CPS1P31327 1500 aa20.31■□□□□ 0.84
GTF2F1-202ENST00000593678 WAPLQ7Z5K2 1190 aa20.3■□□□□ 0.84
GTF2F1-202ENST00000593678 ATAD2Q6PL18 1390 aa20.29■□□□□ 0.84
GTF2F1-202ENST00000593678 CABP2Q9NPB3 220 aa20.29■□□□□ 0.84
GTF2F1-202ENST00000593678 NINLQ9Y2I6 1382 aa20.29■□□□□ 0.84
GTF2F1-202ENST00000593678 MRS2Q9HD23 443 aa20.28■□□□□ 0.84
GTF2F1-202ENST00000593678 CC2D1BQ5T0F9 858 aaKnown RBP20.27■□□□□ 0.83
GTF2F1-202ENST00000593678 PLEKHH1Q9ULM0 1364 aa20.27■□□□□ 0.83
GTF2F1-202ENST00000593678 MYBBP1AQ9BQG0 1328 aaKnown RBP20.26■□□□□ 0.83
GTF2F1-202ENST00000593678 PIK3R4Q99570 1358 aa20.26■□□□□ 0.83
GTF2F1-202ENST00000593678 CDK19Q9BWU1 502 aa20.26■□□□□ 0.83
GTF2F1-202ENST00000593678 AMOTL2Q9Y2J4 779 aa20.25■□□□□ 0.83
GTF2F1-202ENST00000593678 SLC12A5Q9H2X9 1139 aa20.24■□□□□ 0.83
GTF2F1-202ENST00000593678 PARD3Q8TEW0 1356 aa20.24■□□□□ 0.83
GTF2F1-202ENST00000593678 ROBO2Q9HCK4 1378 aa20.23■□□□□ 0.83
GTF2F1-202ENST00000593678 PTCH1Q13635 1447 aa20.22■□□□□ 0.83
GTF2F1-202ENST00000593678 ANKRD36BQ8N2N9 1353 aa20.21■□□□□ 0.83
GTF2F1-202ENST00000593678 NPC1L1Q9UHC9 1359 aa20.21■□□□□ 0.83
GTF2F1-202ENST00000593678 NPHP4O75161 1426 aaPredicted RBP20.21■□□□□ 0.83
GTF2F1-202ENST00000593678 PTPRUQ92729 1446 aa20.21■□□□□ 0.83
GTF2F1-202ENST00000593678 WASLO00401 505 aaPredicted RBP20.21■□□□□ 0.83
GTF2F1-202ENST00000593678 TERF2IPQ9NYB0 399 aa20.21■□□□□ 0.83
GTF2F1-202ENST00000593678 AMER1Q5JTC6 1135 aaPredicted RBP20.19■□□□□ 0.82
GTF2F1-202ENST00000593678 NLRP13Q86W25 1043 aa20.19■□□□□ 0.82
GTF2F1-202ENST00000593678 NSD3Q9BZ95 1437 aa20.19■□□□□ 0.82
GTF2F1-202ENST00000593678 BRD4O60885 1362 aaPredicted RBP20.18■□□□□ 0.82
GTF2F1-202ENST00000593678 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
GTF2F1-202ENST00000593678 CARD14Q9BXL6 1004 aa20.17■□□□□ 0.82
GTF2F1-202ENST00000593678 CGNL1Q0VF96 1302 aa20.17■□□□□ 0.82
GTF2F1-202ENST00000593678 XRN1Q8IZH2 1706 aaKnown RBP20.16■□□□□ 0.82
GTF2F1-202ENST00000593678 CCDC184Q52MB2 194 aa20.16■□□□□ 0.82
GTF2F1-202ENST00000593678 KDM4FA0A1W2PPD8 638 aa20.16■□□□□ 0.82
GTF2F1-202ENST00000593678 FAM9BQ8IZU0 186 aa20.16■□□□□ 0.82
GTF2F1-202ENST00000593678 ADGRB2O60241 1585 aa20.15■□□□□ 0.82
GTF2F1-202ENST00000593678 NCKAP5LQ9HCH0 1330 aa20.15■□□□□ 0.82
GTF2F1-202ENST00000593678 KCNA6P17658 529 aa20.14■□□□□ 0.81
GTF2F1-202ENST00000593678 CABP1Q9NZU7 370 aa20.14■□□□□ 0.81
GTF2F1-202ENST00000593678 A0A1W2PP64 1363 aa20.13■□□□□ 0.81
GTF2F1-202ENST00000593678 USP32Q8NFA0 1604 aa20.13■□□□□ 0.81
GTF2F1-202ENST00000593678 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.12■□□□□ 0.81
GTF2F1-202ENST00000593678 ATP7BP35670 1465 aa20.12■□□□□ 0.81
GTF2F1-202ENST00000593678 NUDT16Q96DE0 195 aaKnown RBP20.12■□□□□ 0.81
GTF2F1-202ENST00000593678 CHD2O14647 1828 aaKnown RBP20.12■□□□□ 0.81
GTF2F1-202ENST00000593678 CCDC61Q9Y6R9 512 aa20.11■□□□□ 0.81
GTF2F1-202ENST00000593678 PPIP5K1Q6PFW1 1433 aa20.11■□□□□ 0.81
GTF2F1-202ENST00000593678 NSD2O96028 1365 aa20.11■□□□□ 0.81
GTF2F1-202ENST00000593678 MORC1Q86VD1 984 aa20.09■□□□□ 0.81
GTF2F1-202ENST00000593678 PPP2R1AP30153 589 aa20.07■□□□□ 0.8
GTF2F1-202ENST00000593678 HNRNPUQ00839 825 aaKnown RBP eCLIP20.07■□□□□ 0.8
GTF2F1-202ENST00000593678 CD163L1Q9NR16 1453 aa20.06■□□□□ 0.8
GTF2F1-202ENST00000593678 PNISRQ8TF01 805 aaKnown RBP20.05■□□□□ 0.8
GTF2F1-202ENST00000593678 HSPA2P54652 639 aa20.05■□□□□ 0.8
GTF2F1-202ENST00000593678 CDC42BPGQ6DT37 1551 aa20.03■□□□□ 0.8
GTF2F1-202ENST00000593678 NUTM2FA1L443 756 aa20.03■□□□□ 0.8
GTF2F1-202ENST00000593678 C14orf37Q86TY3 774 aa20.03■□□□□ 0.8
GTF2F1-202ENST00000593678 ZNF692Q9BU19 519 aaPredicted RBP20.03■□□□□ 0.8
GTF2F1-202ENST00000593678 ITSN1Q15811 1721 aa20.02■□□□□ 0.8
GTF2F1-202ENST00000593678 LMTK3Q96Q04 1460 aa20.02■□□□□ 0.79
GTF2F1-202ENST00000593678 PRR36Q9H6K5 1346 aa20.01■□□□□ 0.79
GTF2F1-202ENST00000593678 NWD1Q149M9 1564 aa20.01■□□□□ 0.79
GTF2F1-202ENST00000593678 CPSF1Q10570 1443 aaKnown RBP20.01■□□□□ 0.79
GTF2F1-202ENST00000593678 EDC4Q6P2E9 1401 aaKnown RBP20.01■□□□□ 0.79
GTF2F1-202ENST00000593678 ANKARQ7Z5J8 1434 aa20■□□□□ 0.79
GTF2F1-202ENST00000593678 TOPAZ1Q8N9V7 1692 aa20■□□□□ 0.79
GTF2F1-202ENST00000593678 TNNT2P45379 298 aaPredicted RBP19.99■□□□□ 0.79
GTF2F1-202ENST00000593678 WDR43Q15061 677 aaKnown RBP eCLIP19.99■□□□□ 0.797e-9■■■□□ 16.9
GTF2F1-202ENST00000593678 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.99■□□□□ 0.79
GTF2F1-202ENST00000593678 KIF20BQ96Q89 1820 aa19.98■□□□□ 0.79
GTF2F1-202ENST00000593678 PLEKHG3A1L390 1219 aa19.98■□□□□ 0.79
GTF2F1-202ENST00000593678 NKTRP30414 1462 aaKnown RBP19.98■□□□□ 0.79
GTF2F1-202ENST00000593678 GGNBP2Q9H3C7 697 aa19.98■□□□□ 0.79
GTF2F1-202ENST00000593678 ADGRL3Q9HAR2 1447 aa19.98■□□□□ 0.79
GTF2F1-202ENST00000593678 ANKRD26Q9UPS8 1709 aa19.97■□□□□ 0.79
GTF2F1-202ENST00000593678 FYB1O15117 783 aa19.97■□□□□ 0.79
GTF2F1-202ENST00000593678 PROSER2Q86WR7 435 aaPredicted RBP19.97■□□□□ 0.79
GTF2F1-202ENST00000593678 AKAP12Q02952 1782 aa19.97■□□□□ 0.79
GTF2F1-202ENST00000593678 NALCNQ8IZF0 1738 aa19.97■□□□□ 0.79
GTF2F1-202ENST00000593678 MON2Q7Z3U7 1717 aa19.96■□□□□ 0.79
GTF2F1-202ENST00000593678 ACEP12821 1306 aa19.96■□□□□ 0.79
GTF2F1-202ENST00000593678 FMN2Q9NZ56 1722 aa19.96■□□□□ 0.79
GTF2F1-202ENST00000593678 CFAP53Q96M91 514 aa19.96■□□□□ 0.79
GTF2F1-202ENST00000593678 NGDNQ8NEJ9 315 aaKnown RBP19.95■□□□□ 0.78
GTF2F1-202ENST00000593678 RBM33Q96EV2 1170 aaKnown RBP19.94■□□□□ 0.78
GTF2F1-202ENST00000593678 POLR3AO14802 1390 aaPredicted RBP19.92■□□□□ 0.78
GTF2F1-202ENST00000593678 ZBED9Q6R2W3 1325 aa19.92■□□□□ 0.78
GTF2F1-202ENST00000593678 PMFBP1Q8TBY8 1022 aa19.92■□□□□ 0.78
GTF2F1-202ENST00000593678 INSRP06213 1382 aa19.91■□□□□ 0.78
GTF2F1-202ENST00000593678 USP6P35125 1406 aa19.91■□□□□ 0.78
GTF2F1-202ENST00000593678 COG3Q96JB2 828 aa19.9■□□□□ 0.78
GTF2F1-202ENST00000593678 RGPD8O14715 1765 aaPredicted RBP19.9■□□□□ 0.78
GTF2F1-202ENST00000593678 MTHFSP49914 203 aa19.9■□□□□ 0.78
GTF2F1-202ENST00000593678 STRCQ7RTU9 1775 aa19.88■□□□□ 0.77
GTF2F1-202ENST00000593678 NME9Q86XW9 330 aa19.88■□□□□ 0.77
GTF2F1-202ENST00000593678 TTC21BQ7Z4L5 1316 aa19.88■□□□□ 0.77
GTF2F1-202ENST00000593678 C19orf44Q9H6X5 657 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms