RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 PRAM1Q96QH2 718 aa22.07■■□□□ 1.12
TRIM47-206ENST00000592942 MST1RQ04912 1400 aa22.06■■□□□ 1.12
TRIM47-206ENST00000592942 DLC1Q96QB1 1528 aa22.06■■□□□ 1.12
TRIM47-206ENST00000592942 KIAA1210Q9ULL0 1709 aa22.05■■□□□ 1.12
TRIM47-206ENST00000592942 ROBO1Q9Y6N7 1651 aa22.04■■□□□ 1.12
TRIM47-206ENST00000592942 BRINP3Q76B58 766 aa22.03■■□□□ 1.12
TRIM47-206ENST00000592942 SAFB2Q14151 953 aaKnown RBP eCLIP22.02■■□□□ 1.12
TRIM47-206ENST00000592942 CLSPNQ9HAW4 1339 aa22.02■■□□□ 1.12
TRIM47-206ENST00000592942 TONSLQ96HA7 1378 aa22.01■■□□□ 1.11
TRIM47-206ENST00000592942 MED1Q15648 1581 aaPredicted RBP22.01■■□□□ 1.11
TRIM47-206ENST00000592942 POGKQ9P215 609 aa22■■□□□ 1.11
TRIM47-206ENST00000592942 C1orf167Q5SNV9 1468 aa22■■□□□ 1.11
TRIM47-206ENST00000592942 ORAI2Q96SN7 254 aa21.98■■□□□ 1.11
TRIM47-206ENST00000592942 CDC42BPGQ6DT37 1551 aa21.96■■□□□ 1.11
TRIM47-206ENST00000592942 TRPM1Q7Z4N2 1603 aa21.96■■□□□ 1.11
TRIM47-206ENST00000592942 NUTM2FA1L443 756 aa21.94■■□□□ 1.1
TRIM47-206ENST00000592942 DDX17Q92841 729 aaKnown RBP21.94■■□□□ 1.1
TRIM47-206ENST00000592942 ARHGEF28Q8N1W1 1705 aaKnown RBP21.94■■□□□ 1.1
TRIM47-206ENST00000592942 MINK1Q8N4C8 1332 aaPredicted RBP21.93■■□□□ 1.1
TRIM47-206ENST00000592942 CCER1Q8TC90 406 aaPredicted RBP21.93■■□□□ 1.1
TRIM47-206ENST00000592942 HIRIP3Q9BW71 556 aaPredicted RBP21.93■■□□□ 1.1
TRIM47-206ENST00000592942 ROCK2O75116 1388 aaKnown RBP21.91■■□□□ 1.1
TRIM47-206ENST00000592942 GPRASP1Q5JY77 1395 aa21.91■■□□□ 1.1
TRIM47-206ENST00000592942 PHF23Q9BUL5 403 aaPredicted RBP21.91■■□□□ 1.1
TRIM47-206ENST00000592942 TIMELESSQ9UNS1 1208 aa21.91■■□□□ 1.1
TRIM47-206ENST00000592942 ESCO1Q5FWF5 840 aa21.9■■□□□ 1.1
TRIM47-206ENST00000592942 AHDC1Q5TGY3 1603 aaPredicted RBP21.9■■□□□ 1.1
TRIM47-206ENST00000592942 FMN2Q9NZ56 1722 aa21.89■■□□□ 1.1
TRIM47-206ENST00000592942 WASLO00401 505 aaPredicted RBP21.89■■□□□ 1.09
TRIM47-206ENST00000592942 PHLPP1O60346 1717 aa21.89■■□□□ 1.09
TRIM47-206ENST00000592942 ADGRB2O60241 1585 aa21.88■■□□□ 1.09
TRIM47-206ENST00000592942 COL16A1Q07092 1604 aaPredicted RBP21.88■■□□□ 1.09
TRIM47-206ENST00000592942 PRR36Q9H6K5 1346 aa21.86■■□□□ 1.09
TRIM47-206ENST00000592942 SOS2Q07890 1332 aaPredicted RBP21.85■■□□□ 1.09
TRIM47-206ENST00000592942 CENPJQ9HC77 1338 aaPredicted RBP21.85■■□□□ 1.09
TRIM47-206ENST00000592942 RALGAPBQ86X10 1494 aa21.85■■□□□ 1.09
TRIM47-206ENST00000592942 NHSL1Q5SYE7 1610 aa21.85■■□□□ 1.09
TRIM47-206ENST00000592942 CDK19Q9BWU1 502 aa21.84■■□□□ 1.09
TRIM47-206ENST00000592942 CARD11Q9BXL7 1154 aa21.84■■□□□ 1.09
TRIM47-206ENST00000592942 RGPD8O14715 1765 aaPredicted RBP21.84■■□□□ 1.09
TRIM47-206ENST00000592942 FOXO3O43524 673 aa21.83■■□□□ 1.09
TRIM47-206ENST00000592942 USP32Q8NFA0 1604 aa21.83■■□□□ 1.08
TRIM47-206ENST00000592942 ANKARQ7Z5J8 1434 aa21.81■■□□□ 1.08
TRIM47-206ENST00000592942 PHF8Q9UPP1 1060 aa21.81■■□□□ 1.08
TRIM47-206ENST00000592942 JCADQ9P266 1359 aa21.81■■□□□ 1.08
TRIM47-206ENST00000592942 LRRC59Q96AG4 307 aaKnown RBP21.8■■□□□ 1.08
TRIM47-206ENST00000592942 NUDT16Q96DE0 195 aaKnown RBP21.79■■□□□ 1.08
TRIM47-206ENST00000592942 NPHP3Q7Z494 1330 aa21.79■■□□□ 1.08
TRIM47-206ENST00000592942 PMFBP1Q8TBY8 1022 aa21.78■■□□□ 1.08
TRIM47-206ENST00000592942 TULP4Q9NRJ4 1543 aa21.78■■□□□ 1.08
TRIM47-206ENST00000592942 XPCQ01831 940 aaPredicted RBP21.77■■□□□ 1.08
TRIM47-206ENST00000592942 PXDNQ92626 1479 aa21.77■■□□□ 1.07
TRIM47-206ENST00000592942 EIF3AQ14152 1382 aaKnown RBP21.75■■□□□ 1.07
TRIM47-206ENST00000592942 KRT28Q7Z3Y7 464 aa21.75■■□□□ 1.07
TRIM47-206ENST00000592942 ATP7BP35670 1465 aa21.75■■□□□ 1.07
TRIM47-206ENST00000592942 QRICH2Q9H0J4 1663 aa21.75■■□□□ 1.07
TRIM47-206ENST00000592942 CABP2Q9NPB3 220 aa21.74■■□□□ 1.07
TRIM47-206ENST00000592942 CCDC61Q9Y6R9 512 aa21.74■■□□□ 1.07
TRIM47-206ENST00000592942 PNPLA6Q8IY17 1366 aa21.73■■□□□ 1.07
TRIM47-206ENST00000592942 RGS17Q9UGC6 210 aaPredicted RBP21.72■■□□□ 1.07
TRIM47-206ENST00000592942 SPATA31A6Q5VVP1 1343 aa21.72■■□□□ 1.07
TRIM47-206ENST00000592942 KIF1AQ12756 1690 aa21.72■■□□□ 1.07
TRIM47-206ENST00000592942 PLEKHG3A1L390 1219 aa21.71■■□□□ 1.07
TRIM47-206ENST00000592942 SHPRHQ149N8 1683 aa21.71■■□□□ 1.07
TRIM47-206ENST00000592942 ST20-MTHFSA0A0A6YYL1 179 aa21.7■■□□□ 1.06
TRIM47-206ENST00000592942 SRPK2P78362 688 aaKnown RBP21.7■■□□□ 1.06
TRIM47-206ENST00000592942 PSME1Q06323 249 aa21.7■■□□□ 1.06
TRIM47-206ENST00000592942 TESK2Q96S53 571 aa21.7■■□□□ 1.06
TRIM47-206ENST00000592942 EVC2Q86UK5 1308 aa21.7■■□□□ 1.06
TRIM47-206ENST00000592942 SBNO2Q9Y2G9 1366 aa21.7■■□□□ 1.06
TRIM47-206ENST00000592942 SPATA31A3Q5VYP0 1347 aa21.69■■□□□ 1.06
TRIM47-206ENST00000592942 LRP6O75581 1613 aa21.68■■□□□ 1.06
TRIM47-206ENST00000592942 NGDNQ8NEJ9 315 aaKnown RBP21.67■■□□□ 1.06
TRIM47-206ENST00000592942 SBNO1A3KN83 1393 aa21.65■■□□□ 1.06
TRIM47-206ENST00000592942 POLR3AO14802 1390 aaPredicted RBP21.65■■□□□ 1.06
TRIM47-206ENST00000592942 ACEP12821 1306 aa21.65■■□□□ 1.06
TRIM47-206ENST00000592942 NUTM2BA6NNL0 878 aaPredicted RBP21.65■■□□□ 1.06
TRIM47-206ENST00000592942 NUTM2EB1AL46 878 aaPredicted RBP21.65■■□□□ 1.06
TRIM47-206ENST00000592942 NUTM2AQ8IVF1 878 aaPredicted RBP21.65■■□□□ 1.06
TRIM47-206ENST00000592942 CABP1Q9NZU7 370 aa21.65■■□□□ 1.06
TRIM47-206ENST00000592942 TOPAZ1Q8N9V7 1692 aa21.64■■□□□ 1.05
TRIM47-206ENST00000592942 USP47Q96K76 1375 aa21.63■■□□□ 1.05
TRIM47-206ENST00000592942 PPIP5K1Q6PFW1 1433 aa21.63■■□□□ 1.05
TRIM47-206ENST00000592942 ITSN1Q15811 1721 aa21.62■■□□□ 1.05
TRIM47-206ENST00000592942 COL22A1Q8NFW1 1626 aaPredicted RBP21.61■■□□□ 1.05
TRIM47-206ENST00000592942 TRPM3Q9HCF6 1732 aaPredicted RBP21.6■■□□□ 1.05
TRIM47-206ENST00000592942 TNS3Q68CZ2 1445 aa21.6■■□□□ 1.05
TRIM47-206ENST00000592942 PUS7Q96PZ0 661 aaKnown RBP21.59■■□□□ 1.05
TRIM47-206ENST00000592942 POTEAQ6S8J7 498 aa21.57■■□□□ 1.04
TRIM47-206ENST00000592942 ADAMTS2O95450 1211 aa21.56■■□□□ 1.04
TRIM47-206ENST00000592942 CABLES1Q8TDN4 633 aa21.56■■□□□ 1.04
TRIM47-206ENST00000592942 ATAD2Q6PL18 1390 aa21.56■■□□□ 1.04
TRIM47-206ENST00000592942 SLC24A1O60721 1099 aa21.55■■□□□ 1.04
TRIM47-206ENST00000592942 LMOD2Q6P5Q4 547 aa21.55■■□□□ 1.04
TRIM47-206ENST00000592942 ALS2Q96Q42 1657 aa21.54■■□□□ 1.04
TRIM47-206ENST00000592942 ARHGEF10O15013 1369 aa21.54■■□□□ 1.04
TRIM47-206ENST00000592942 PAK3O75914 559 aaPredicted RBP21.54■■□□□ 1.04
TRIM47-206ENST00000592942 MEX3CQ5U5Q3 659 aaKnown RBP21.54■■□□□ 1.04
TRIM47-206ENST00000592942 SLC12A5Q9H2X9 1139 aa21.53■■□□□ 1.04
TRIM47-206ENST00000592942 CPSF1Q10570 1443 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms