RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 LRPPRCP42704 1394 aaKnown RBP20.03■□□□□ 0.8
CAPNS1-213ENST00000592354 ZNF772Q68DY9 489 aaPredicted RBP20.02■□□□□ 0.8
CAPNS1-213ENST00000592354 TMEM132EQ6IEE7 984 aa20.02■□□□□ 0.8
CAPNS1-213ENST00000592354 MYOM2P54296 1465 aa20.02■□□□□ 0.8
CAPNS1-213ENST00000592354 PLEKHH1Q9ULM0 1364 aa20.01■□□□□ 0.79
CAPNS1-213ENST00000592354 WAPLQ7Z5K2 1190 aa20■□□□□ 0.79
CAPNS1-213ENST00000592354 COL22A1Q8NFW1 1626 aaPredicted RBP20■□□□□ 0.79
CAPNS1-213ENST00000592354 YTHDC2Q9H6S0 1430 aaKnown RBP20■□□□□ 0.79
CAPNS1-213ENST00000592354 AFF2P51816 1311 aa20■□□□□ 0.79
CAPNS1-213ENST00000592354 NRXN1Q9ULB1 1477 aa19.99■□□□□ 0.79
CAPNS1-213ENST00000592354 SOS2Q07890 1332 aaPredicted RBP19.98■□□□□ 0.79
CAPNS1-213ENST00000592354 ABCC11Q96J66 1382 aa19.97■□□□□ 0.79
CAPNS1-213ENST00000592354 NUTM2FA1L443 756 aa19.97■□□□□ 0.79
CAPNS1-213ENST00000592354 C8orf37Q96NL8 207 aa19.97■□□□□ 0.79
CAPNS1-213ENST00000592354 RGPD8O14715 1765 aaPredicted RBP19.97■□□□□ 0.79
CAPNS1-213ENST00000592354 PXDNQ92626 1479 aa19.97■□□□□ 0.79
CAPNS1-213ENST00000592354 ACIN1Q9UKV3 1341 aaKnown RBP19.97■□□□□ 0.79
CAPNS1-213ENST00000592354 KIF1AQ12756 1690 aa19.97■□□□□ 0.79
CAPNS1-213ENST00000592354 ESCO1Q5FWF5 840 aa19.96■□□□□ 0.79
CAPNS1-213ENST00000592354 MARF1Q9Y4F3 1742 aaKnown RBP19.95■□□□□ 0.78
CAPNS1-213ENST00000592354 ADAMTS2O95450 1211 aa19.94■□□□□ 0.78
CAPNS1-213ENST00000592354 XPCQ01831 940 aaPredicted RBP19.93■□□□□ 0.78
CAPNS1-213ENST00000592354 RXRBP28702 533 aa19.92■□□□□ 0.78
CAPNS1-213ENST00000592354 CFAP70Q5T0N1 1121 aa19.92■□□□□ 0.78
CAPNS1-213ENST00000592354 NPHP3Q7Z494 1330 aa19.92■□□□□ 0.78
CAPNS1-213ENST00000592354 CDK12Q9NYV4 1490 aaPredicted RBP19.92■□□□□ 0.78
CAPNS1-213ENST00000592354 C14orf93Q9H972 538 aaKnown RBP19.91■□□□□ 0.78
CAPNS1-213ENST00000592354 RGS12O14924 1447 aa19.91■□□□□ 0.78
CAPNS1-213ENST00000592354 ADGRB1O14514 1584 aa19.9■□□□□ 0.78
CAPNS1-213ENST00000592354 FOXO3O43524 673 aa19.89■□□□□ 0.77
CAPNS1-213ENST00000592354 DHX57Q6P158 1386 aaKnown RBP19.89■□□□□ 0.77
CAPNS1-213ENST00000592354 NGLY1Q96IV0 654 aa19.88■□□□□ 0.77
CAPNS1-213ENST00000592354 USP32Q8NFA0 1604 aa19.87■□□□□ 0.77
CAPNS1-213ENST00000592354 ADGRB2O60241 1585 aa19.87■□□□□ 0.77
CAPNS1-213ENST00000592354 DLC1Q96QB1 1528 aa19.87■□□□□ 0.77
CAPNS1-213ENST00000592354 SAFB2Q14151 953 aaKnown RBP eCLIP19.87■□□□□ 0.77
CAPNS1-213ENST00000592354 PRAM1Q96QH2 718 aa19.85■□□□□ 0.77
CAPNS1-213ENST00000592354 ABCA3Q99758 1704 aa19.85■□□□□ 0.77
CAPNS1-213ENST00000592354 QTRT2Q9H974 415 aaKnown RBP19.84■□□□□ 0.77
CAPNS1-213ENST00000592354 KDM2AQ9Y2K7 1162 aa19.83■□□□□ 0.77
CAPNS1-213ENST00000592354 ARHGEF28Q8N1W1 1705 aaKnown RBP19.82■□□□□ 0.76
CAPNS1-213ENST00000592354 RBM6P78332 1123 aaKnown RBP19.82■□□□□ 0.76
CAPNS1-213ENST00000592354 UPF1Q92900 1129 aaKnown RBP eCLIP19.82■□□□□ 0.76
CAPNS1-213ENST00000592354 SIRT1Q96EB6 747 aa19.82■□□□□ 0.76
CAPNS1-213ENST00000592354 USP21Q9UK80 565 aa19.82■□□□□ 0.76
CAPNS1-213ENST00000592354 DCAF11Q8TEB1 546 aa19.81■□□□□ 0.76
CAPNS1-213ENST00000592354 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.8■□□□□ 0.76
CAPNS1-213ENST00000592354 POGKQ9P215 609 aa19.8■□□□□ 0.76
CAPNS1-213ENST00000592354 ATRNO75882 1429 aa19.79■□□□□ 0.76
CAPNS1-213ENST00000592354 TRAK1Q9UPV9 953 aa19.79■□□□□ 0.76
CAPNS1-213ENST00000592354 SPATA31A3Q5VYP0 1347 aa19.78■□□□□ 0.76
CAPNS1-213ENST00000592354 TNS3Q68CZ2 1445 aa19.78■□□□□ 0.76
CAPNS1-213ENST00000592354 PHF8Q9UPP1 1060 aa19.78■□□□□ 0.76
CAPNS1-213ENST00000592354 PLCH1Q4KWH8 1693 aa19.78■□□□□ 0.76
CAPNS1-213ENST00000592354 ANKARQ7Z5J8 1434 aa19.77■□□□□ 0.76
CAPNS1-213ENST00000592354 TRPM3Q9HCF6 1732 aaPredicted RBP19.77■□□□□ 0.76
CAPNS1-213ENST00000592354 FNBP4Q8N3X1 1017 aaPredicted RBP19.77■□□□□ 0.76
CAPNS1-213ENST00000592354 HIRIP3Q9BW71 556 aaPredicted RBP19.77■□□□□ 0.76
CAPNS1-213ENST00000592354 BCL9LQ86UU0 1499 aa19.77■□□□□ 0.76
CAPNS1-213ENST00000592354 KRT28Q7Z3Y7 464 aa19.76■□□□□ 0.75
CAPNS1-213ENST00000592354 TRPC5Q9UL62 973 aaPredicted RBP19.76■□□□□ 0.75
CAPNS1-213ENST00000592354 TULP4Q9NRJ4 1543 aa19.76■□□□□ 0.75
CAPNS1-213ENST00000592354 MINK1Q8N4C8 1332 aaPredicted RBP19.76■□□□□ 0.75
CAPNS1-213ENST00000592354 PLEKHG5O94827 1062 aa19.75■□□□□ 0.75
CAPNS1-213ENST00000592354 HRCP23327 699 aa19.74■□□□□ 0.75
CAPNS1-213ENST00000592354 ITSN1Q15811 1721 aa19.73■□□□□ 0.75
CAPNS1-213ENST00000592354 PMFBP1Q8TBY8 1022 aa19.73■□□□□ 0.75
CAPNS1-213ENST00000592354 KIAA1210Q9ULL0 1709 aa19.73■□□□□ 0.75
CAPNS1-213ENST00000592354 ALS2Q96Q42 1657 aa19.72■□□□□ 0.75
CAPNS1-213ENST00000592354 SLIT2O94813 1529 aa19.71■□□□□ 0.75
CAPNS1-213ENST00000592354 GLI3P10071 1580 aa19.71■□□□□ 0.75
CAPNS1-213ENST00000592354 CABLES1Q8TDN4 633 aa19.71■□□□□ 0.75
CAPNS1-213ENST00000592354 NWD2Q9ULI1 1742 aa19.71■□□□□ 0.75
CAPNS1-213ENST00000592354 SBNO1A3KN83 1393 aa19.7■□□□□ 0.74
CAPNS1-213ENST00000592354 HAP1P54257 671 aaPredicted RBP19.7■□□□□ 0.74
CAPNS1-213ENST00000592354 LMOD2Q6P5Q4 547 aa19.7■□□□□ 0.74
CAPNS1-213ENST00000592354 PRR36Q9H6K5 1346 aa19.7■□□□□ 0.74
CAPNS1-213ENST00000592354 EIF3AQ14152 1382 aaKnown RBP19.7■□□□□ 0.74
CAPNS1-213ENST00000592354 CRYBG1Q9Y4K1 1723 aa19.69■□□□□ 0.74
CAPNS1-213ENST00000592354 PSME1Q06323 249 aa19.69■□□□□ 0.74
CAPNS1-213ENST00000592354 ATAD2Q6PL18 1390 aa19.69■□□□□ 0.74
CAPNS1-213ENST00000592354 TOPAZ1Q8N9V7 1692 aa19.68■□□□□ 0.74
CAPNS1-213ENST00000592354 ARHGEF10O15013 1369 aa19.68■□□□□ 0.74
CAPNS1-213ENST00000592354 RALGAPBQ86X10 1494 aa19.67■□□□□ 0.74
CAPNS1-213ENST00000592354 STAC3Q96MF2 364 aa19.67■□□□□ 0.74
CAPNS1-213ENST00000592354 NRAPQ86VF7 1730 aa19.67■□□□□ 0.74
CAPNS1-213ENST00000592354 BRWD3Q6RI45 1802 aa19.67■□□□□ 0.74
CAPNS1-213ENST00000592354 ATP7BP35670 1465 aa19.67■□□□□ 0.74
CAPNS1-213ENST00000592354 WASLO00401 505 aaPredicted RBP19.65■□□□□ 0.74
CAPNS1-213ENST00000592354 UNC5CLQ8IV45 518 aa19.64■□□□□ 0.73
CAPNS1-213ENST00000592354 GJD4Q96KN9 370 aaPredicted RBP19.64■□□□□ 0.73
CAPNS1-213ENST00000592354 GPRASP1Q5JY77 1395 aa19.63■□□□□ 0.73
CAPNS1-213ENST00000592354 PHRF1Q9P1Y6 1649 aaKnown RBP19.62■□□□□ 0.73
CAPNS1-213ENST00000592354 COL14A1Q05707 1796 aaKnown RBP19.62■□□□□ 0.73
CAPNS1-213ENST00000592354 QRICH2Q9H0J4 1663 aa19.62■□□□□ 0.73
CAPNS1-213ENST00000592354 EP400Q96L91 3159 aa19.61■□□□□ 0.73
CAPNS1-213ENST00000592354 NGDNQ8NEJ9 315 aaKnown RBP19.59■□□□□ 0.73
CAPNS1-213ENST00000592354 CCDC9Q9Y3X0 531 aaKnown RBP19.58■□□□□ 0.72
CAPNS1-213ENST00000592354 PAK3O75914 559 aaPredicted RBP19.57■□□□□ 0.72
CAPNS1-213ENST00000592354 NBPF1Q3BBV0 1214 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms