RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 UPF1Q92900 1129 aaKnown RBP eCLIP23.44■■□□□ 1.34
CIRBP-230ENST00000591055 QTRT2Q9H974 415 aaKnown RBP23.43■■□□□ 1.34
CIRBP-230ENST00000591055 NGLY1Q96IV0 654 aa23.42■■□□□ 1.34
CIRBP-230ENST00000591055 CDC42BPGQ6DT37 1551 aa23.42■■□□□ 1.34
CIRBP-230ENST00000591055 IFT172Q9UG01 1749 aa23.42■■□□□ 1.34
CIRBP-230ENST00000591055 LRPPRCP42704 1394 aaKnown RBP23.41■■□□□ 1.34
CIRBP-230ENST00000591055 ESCO1Q5FWF5 840 aa23.41■■□□□ 1.34
CIRBP-230ENST00000591055 TECPR2O15040 1411 aa23.41■■□□□ 1.34
CIRBP-230ENST00000591055 ACIN1Q9UKV3 1341 aaKnown RBP23.4■■□□□ 1.34
CIRBP-230ENST00000591055 RBM6P78332 1123 aaKnown RBP23.4■■□□□ 1.34
CIRBP-230ENST00000591055 WAPLQ7Z5K2 1190 aa23.4■■□□□ 1.34
CIRBP-230ENST00000591055 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
CIRBP-230ENST00000591055 TMEM132EQ6IEE7 984 aa23.39■■□□□ 1.33
CIRBP-230ENST00000591055 ABCC11Q96J66 1382 aa23.39■■□□□ 1.33
CIRBP-230ENST00000591055 PIK3C2GO75747 1445 aa23.38■■□□□ 1.33
CIRBP-230ENST00000591055 NUTM2FA1L443 756 aa23.35■■□□□ 1.33
CIRBP-230ENST00000591055 KNDC1Q76NI1 1749 aa23.35■■□□□ 1.33
CIRBP-230ENST00000591055 PLEKHH1Q9ULM0 1364 aa23.35■■□□□ 1.33
CIRBP-230ENST00000591055 RGS12O14924 1447 aa23.34■■□□□ 1.33
CIRBP-230ENST00000591055 FOXO3O43524 673 aa23.34■■□□□ 1.33
CIRBP-230ENST00000591055 USP21Q9UK80 565 aa23.34■■□□□ 1.33
CIRBP-230ENST00000591055 YTHDC2Q9H6S0 1430 aaKnown RBP23.33■■□□□ 1.33
CIRBP-230ENST00000591055 COL22A1Q8NFW1 1626 aaPredicted RBP23.33■■□□□ 1.33
CIRBP-230ENST00000591055 PXDNQ92626 1479 aa23.33■■□□□ 1.33
CIRBP-230ENST00000591055 XPCQ01831 940 aaPredicted RBP23.33■■□□□ 1.33
CIRBP-230ENST00000591055 C14orf93Q9H972 538 aaKnown RBP23.31■■□□□ 1.32
CIRBP-230ENST00000591055 TRPC5Q9UL62 973 aaPredicted RBP23.31■■□□□ 1.32
CIRBP-230ENST00000591055 MYOM2P54296 1465 aa23.3■■□□□ 1.32
CIRBP-230ENST00000591055 FNBP4Q8N3X1 1017 aaPredicted RBP23.3■■□□□ 1.32
CIRBP-230ENST00000591055 SIRT1Q96EB6 747 aa23.29■■□□□ 1.32
CIRBP-230ENST00000591055 FMN2Q9NZ56 1722 aa23.28■■□□□ 1.32
CIRBP-230ENST00000591055 DHX57Q6P158 1386 aaKnown RBP23.27■■□□□ 1.32
CIRBP-230ENST00000591055 CFAP70Q5T0N1 1121 aa23.27■■□□□ 1.32
CIRBP-230ENST00000591055 NRXN1Q9ULB1 1477 aa23.26■■□□□ 1.31
CIRBP-230ENST00000591055 RAB3GAP2Q9H2M9 1393 aa23.26■■□□□ 1.31
CIRBP-230ENST00000591055 ATRNO75882 1429 aa23.25■■□□□ 1.31
CIRBP-230ENST00000591055 KIF1AQ12756 1690 aa23.23■■□□□ 1.31
CIRBP-230ENST00000591055 KRT28Q7Z3Y7 464 aa23.22■■□□□ 1.31
CIRBP-230ENST00000591055 MARF1Q9Y4F3 1742 aaKnown RBP23.22■■□□□ 1.31
CIRBP-230ENST00000591055 SPATA31A3Q5VYP0 1347 aa23.21■■□□□ 1.31
CIRBP-230ENST00000591055 BCL9LQ86UU0 1499 aa23.2■■□□□ 1.3
CIRBP-230ENST00000591055 ATAD2Q6PL18 1390 aa23.2■■□□□ 1.3
CIRBP-230ENST00000591055 SAFB2Q14151 953 aaKnown RBP eCLIP23.2■■□□□ 1.3
CIRBP-230ENST00000591055 PRAM1Q96QH2 718 aa23.2■■□□□ 1.3
CIRBP-230ENST00000591055 PHF8Q9UPP1 1060 aa23.2■■□□□ 1.3
CIRBP-230ENST00000591055 POGKQ9P215 609 aa23.18■■□□□ 1.3
CIRBP-230ENST00000591055 RGPD8O14715 1765 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-230ENST00000591055 PSME1Q06323 249 aa23.17■■□□□ 1.3
CIRBP-230ENST00000591055 DLC1Q96QB1 1528 aa23.15■■□□□ 1.3
CIRBP-230ENST00000591055 GJD4Q96KN9 370 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-230ENST00000591055 TNS3Q68CZ2 1445 aa23.14■■□□□ 1.29
CIRBP-230ENST00000591055 HAP1P54257 671 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-230ENST00000591055 UNC5CLQ8IV45 518 aa23.13■■□□□ 1.29
CIRBP-230ENST00000591055 KDM2AQ9Y2K7 1162 aa23.13■■□□□ 1.29
CIRBP-230ENST00000591055 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.11■■□□□ 1.29
CIRBP-230ENST00000591055 ADGRB1O14514 1584 aa23.11■■□□□ 1.29
CIRBP-230ENST00000591055 DCAF11Q8TEB1 546 aa23.11■■□□□ 1.29
CIRBP-230ENST00000591055 TRAK1Q9UPV9 953 aa23.11■■□□□ 1.29
CIRBP-230ENST00000591055 SLIT2O94813 1529 aa23.11■■□□□ 1.29
CIRBP-230ENST00000591055 SBNO1A3KN83 1393 aa23.11■■□□□ 1.29
CIRBP-230ENST00000591055 EP400Q96L91 3159 aa23.11■■□□□ 1.29
CIRBP-230ENST00000591055 ANKARQ7Z5J8 1434 aa23.1■■□□□ 1.29
CIRBP-230ENST00000591055 LMOD2Q6P5Q4 547 aa23.1■■□□□ 1.29
CIRBP-230ENST00000591055 USP32Q8NFA0 1604 aa23.1■■□□□ 1.29
CIRBP-230ENST00000591055 PLEKHG5O94827 1062 aa23.09■■□□□ 1.29
CIRBP-230ENST00000591055 PMFBP1Q8TBY8 1022 aa23.09■■□□□ 1.29
CIRBP-230ENST00000591055 CABLES1Q8TDN4 633 aa23.09■■□□□ 1.29
CIRBP-230ENST00000591055 HIRIP3Q9BW71 556 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-230ENST00000591055 ARHGEF10O15013 1369 aa23.08■■□□□ 1.29
CIRBP-230ENST00000591055 ADGRB2O60241 1585 aa23.08■■□□□ 1.29
CIRBP-230ENST00000591055 HRCP23327 699 aa23.07■■□□□ 1.28
CIRBP-230ENST00000591055 STAC3Q96MF2 364 aa23.07■■□□□ 1.28
CIRBP-230ENST00000591055 MINK1Q8N4C8 1332 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-230ENST00000591055 RALGAPBQ86X10 1494 aa23.06■■□□□ 1.28
CIRBP-230ENST00000591055 GLI3P10071 1580 aa23.05■■□□□ 1.28
CIRBP-230ENST00000591055 EIF3AQ14152 1382 aaKnown RBP23.04■■□□□ 1.28
CIRBP-230ENST00000591055 CCDC125Q86Z20 511 aa23.04■■□□□ 1.28
CIRBP-230ENST00000591055 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
CIRBP-230ENST00000591055 WASLO00401 505 aaPredicted RBP23.01■■□□□ 1.27
CIRBP-230ENST00000591055 VPS72Q15906 364 aa23.01■■□□□ 1.27
CIRBP-230ENST00000591055 ABCA3Q99758 1704 aa23.01■■□□□ 1.27
CIRBP-230ENST00000591055 PRR36Q9H6K5 1346 aa23.01■■□□□ 1.27
CIRBP-230ENST00000591055 TULP4Q9NRJ4 1543 aa23■■□□□ 1.27
CIRBP-230ENST00000591055 PLCH1Q4KWH8 1693 aa23■■□□□ 1.27
CIRBP-230ENST00000591055 NWD2Q9ULI1 1742 aa22.99■■□□□ 1.27
CIRBP-230ENST00000591055 SRCAPQ6ZRS2 3230 aa22.99■■□□□ 1.27
CIRBP-230ENST00000591055 CCDC9Q9Y3X0 531 aaKnown RBP22.99■■□□□ 1.27
CIRBP-230ENST00000591055 FAM83GA6ND36 823 aa22.98■■□□□ 1.27
CIRBP-230ENST00000591055 TRPM3Q9HCF6 1732 aaPredicted RBP22.98■■□□□ 1.27
CIRBP-230ENST00000591055 SEPT12Q8IYM1 358 aa22.97■■□□□ 1.27
CIRBP-230ENST00000591055 NGDNQ8NEJ9 315 aaKnown RBP22.96■■□□□ 1.27
CIRBP-230ENST00000591055 ZRANB1Q9UGI0 708 aa22.96■■□□□ 1.27
CIRBP-230ENST00000591055 BRWD3Q6RI45 1802 aa22.95■■□□□ 1.26
CIRBP-230ENST00000591055 ALS2Q96Q42 1657 aa22.94■■□□□ 1.26
CIRBP-230ENST00000591055 ARHGEF28Q8N1W1 1705 aaKnown RBP22.94■■□□□ 1.26
CIRBP-230ENST00000591055 BLMP54132 1417 aaPredicted RBP22.93■■□□□ 1.26
CIRBP-230ENST00000591055 ONECUT3O60422 494 aaPredicted RBP22.93■■□□□ 1.26
CIRBP-230ENST00000591055 PAK3O75914 559 aaPredicted RBP22.92■■□□□ 1.26
CIRBP-230ENST00000591055 NUDT16Q96DE0 195 aaKnown RBP22.91■■□□□ 1.26
CIRBP-230ENST00000591055 BTG4Q9NY30 223 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms