RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 PCDHB15Q9Y5E8 787 aa12.88□□□□□ -0.35
NEDD4L-230ENST00000590638 SPDYE5A6NIY4 337 aa12.87□□□□□ -0.35
NEDD4L-230ENST00000590638 QPCTQ16769 361 aa12.87□□□□□ -0.35
NEDD4L-230ENST00000590638 PRPF38BQ5VTL8 546 aaKnown RBP12.86□□□□□ -0.35
NEDD4L-230ENST00000590638 ANKK1Q8NFD2 765 aa12.86□□□□□ -0.35
NEDD4L-230ENST00000590638 LILRB3O75022 631 aa12.85□□□□□ -0.35
NEDD4L-230ENST00000590638 FUT2Q10981 343 aa12.85□□□□□ -0.35
NEDD4L-230ENST00000590638 CABLES1Q8TDN4 633 aa12.85□□□□□ -0.35
NEDD4L-230ENST00000590638 AP1G2O75843 785 aa12.84□□□□□ -0.35
NEDD4L-230ENST00000590638 CLUAP1Q96AJ1 413 aa12.84□□□□□ -0.35
NEDD4L-230ENST00000590638 POTEMA6NI47 508 aa12.83□□□□□ -0.36
NEDD4L-230ENST00000590638 GUCA2AQ02747 115 aa12.83□□□□□ -0.36
NEDD4L-230ENST00000590638 PRR14Q9BWN1 585 aa12.83□□□□□ -0.36
NEDD4L-230ENST00000590638 A6NJR5 290 aa12.82□□□□□ -0.36
NEDD4L-230ENST00000590638 APBB1O00213 710 aa12.82□□□□□ -0.36
NEDD4L-230ENST00000590638 HRCP23327 699 aa12.82□□□□□ -0.36
NEDD4L-230ENST00000590638 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
NEDD4L-230ENST00000590638 RTL5Q5HYW3 569 aaPredicted RBP12.82□□□□□ -0.36
NEDD4L-230ENST00000590638 C6orf229H3BNL8 230 aa12.81□□□□□ -0.36
NEDD4L-230ENST00000590638 POTEGQ6S5H5 508 aa12.81□□□□□ -0.36
NEDD4L-230ENST00000590638 HLA-CQ95604 372 aa12.81□□□□□ -0.36
NEDD4L-230ENST00000590638 PRM3Q9NNZ6 103 aa12.81□□□□□ -0.36
NEDD4L-230ENST00000590638 SNRKQ9NRH2 765 aa12.81□□□□□ -0.36
NEDD4L-230ENST00000590638 HRO43593 1189 aa12.8□□□□□ -0.36
NEDD4L-230ENST00000590638 PPP4CP60510 307 aa12.8□□□□□ -0.36
NEDD4L-230ENST00000590638 MTMR2Q13614 643 aa12.8□□□□□ -0.36
NEDD4L-230ENST00000590638 FBXO31Q5XUX0 539 aaPredicted RBP12.8□□□□□ -0.36
NEDD4L-230ENST00000590638 TSC1Q92574 1164 aa12.8□□□□□ -0.36
NEDD4L-230ENST00000590638 PCDHGC3Q9UN70 934 aa12.8□□□□□ -0.36
NEDD4L-230ENST00000590638 HELBQ8NG08 1087 aaPredicted RBP12.78□□□□□ -0.36
NEDD4L-230ENST00000590638 WNT2BQ93097 391 aa12.78□□□□□ -0.36
NEDD4L-230ENST00000590638 CFTRP13569 1480 aa12.78□□□□□ -0.36
NEDD4L-230ENST00000590638 PROSER2Q86WR7 435 aaPredicted RBP12.77□□□□□ -0.37
NEDD4L-230ENST00000590638 HPS5Q9UPZ3 1129 aa12.77□□□□□ -0.37
NEDD4L-230ENST00000590638 USP17L8P0C7I0 530 aa12.76□□□□□ -0.37
NEDD4L-230ENST00000590638 CUX2O14529 1486 aa12.76□□□□□ -0.37
NEDD4L-230ENST00000590638 SOWAHBA6NEL2 793 aa12.75□□□□□ -0.37
NEDD4L-230ENST00000590638 ACTN4O43707 911 aaKnown RBP12.75□□□□□ -0.37
NEDD4L-230ENST00000590638 TRAK2O60296 914 aa12.75□□□□□ -0.37
NEDD4L-230ENST00000590638 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
NEDD4L-230ENST00000590638 WWC1Q8IX03 1113 aa12.75□□□□□ -0.37
NEDD4L-230ENST00000590638 POM121Q96HA1 1249 aa12.75□□□□□ -0.37
NEDD4L-230ENST00000590638 ARXQ96QS3 562 aa12.75□□□□□ -0.37
NEDD4L-230ENST00000590638 CADPSQ9ULU8 1353 aa12.75□□□□□ -0.37
NEDD4L-230ENST00000590638 BCAMP50895 628 aa12.74□□□□□ -0.37
NEDD4L-230ENST00000590638 Q3C1V9 767 aa12.74□□□□□ -0.37
NEDD4L-230ENST00000590638 PUS10Q3MIT2 529 aaKnown RBP12.74□□□□□ -0.37
NEDD4L-230ENST00000590638 TSR3Q9UJK0 312 aaKnown RBP12.74□□□□□ -0.37
NEDD4L-230ENST00000590638 ARID3CA6NKF2 412 aa12.73□□□□□ -0.37
NEDD4L-230ENST00000590638 MTMR14Q8NCE2 650 aa12.72□□□□□ -0.37
NEDD4L-230ENST00000590638 COG6Q9Y2V7 657 aa12.72□□□□□ -0.37
NEDD4L-230ENST00000590638 MORN1Q5T089 497 aa12.71□□□□□ -0.37
NEDD4L-230ENST00000590638 ARID3AQ99856 593 aa12.7□□□□□ -0.38
NEDD4L-230ENST00000590638 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
NEDD4L-230ENST00000590638 SOCS7O14512 581 aa12.69□□□□□ -0.38
NEDD4L-230ENST00000590638 SYMPKQ92797 1274 aaKnown RBP12.69□□□□□ -0.38
NEDD4L-230ENST00000590638 GDPD2Q9HCC8 539 aa12.69□□□□□ -0.38
NEDD4L-230ENST00000590638 SLC27A5Q9Y2P5 690 aa12.69□□□□□ -0.38
NEDD4L-230ENST00000590638 LAMC3Q9Y6N6 1575 aa12.69□□□□□ -0.38
NEDD4L-230ENST00000590638 ABL2P42684 1182 aa12.68□□□□□ -0.38
NEDD4L-230ENST00000590638 CTDSPL2Q05D32 466 aa12.68□□□□□ -0.38
NEDD4L-230ENST00000590638 HOMEZQ8IX15 550 aa12.68□□□□□ -0.38
NEDD4L-230ENST00000590638 PRR7Q8TB68 274 aa12.68□□□□□ -0.38
NEDD4L-230ENST00000590638 PCDHB3Q9Y5E6 796 aa12.68□□□□□ -0.38
NEDD4L-230ENST00000590638 CFAP99D6REC4 459 aa12.67□□□□□ -0.38
NEDD4L-230ENST00000590638 APLP1P51693 650 aa12.67□□□□□ -0.38
NEDD4L-230ENST00000590638 RETREG3Q86VR2 466 aa12.67□□□□□ -0.38
NEDD4L-230ENST00000590638 WRNQ14191 1432 aaPredicted RBP eCLIP12.66□□□□□ -0.38
NEDD4L-230ENST00000590638 NR1I2O75469 434 aa12.66□□□□□ -0.38
NEDD4L-230ENST00000590638 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
NEDD4L-230ENST00000590638 ZNF330Q9Y3S2 320 aaPredicted RBP12.65□□□□□ -0.38
NEDD4L-230ENST00000590638 NDUFB9Q9Y6M9 179 aa12.65□□□□□ -0.38
NEDD4L-230ENST00000590638 KCTD12Q96CX2 325 aaKnown RBP12.63□□□□□ -0.39
NEDD4L-230ENST00000590638 PCDH10Q9P2E7 1040 aa12.63□□□□□ -0.39
NEDD4L-230ENST00000590638 TBC1D2BQ9UPU7 963 aa12.63□□□□□ -0.39
NEDD4L-230ENST00000590638 FMNL1O95466 1100 aaPredicted RBP12.62□□□□□ -0.39
NEDD4L-230ENST00000590638 KRTAP3-3Q9BYR6 98 aa12.62□□□□□ -0.39
NEDD4L-230ENST00000590638 KRTAP3-2Q9BYR7 98 aa12.62□□□□□ -0.39
NEDD4L-230ENST00000590638 C1orf115Q9H7X2 142 aa12.62□□□□□ -0.39
NEDD4L-230ENST00000590638 WBP1LQ9NX94 342 aa12.62□□□□□ -0.39
NEDD4L-230ENST00000590638 FNBP4Q8N3X1 1017 aaPredicted RBP12.61□□□□□ -0.39
NEDD4L-230ENST00000590638 LRRN4Q8WUT4 740 aa12.61□□□□□ -0.39
NEDD4L-230ENST00000590638 USB1Q9BQ65 265 aaKnown RBP12.61□□□□□ -0.39
NEDD4L-230ENST00000590638 NESP48681 1621 aa12.61□□□□□ -0.39
NEDD4L-230ENST00000590638 BLOC1S3Q6QNY0 202 aa12.6□□□□□ -0.39
NEDD4L-230ENST00000590638 THSD4Q6ZMP0 1018 aa12.6□□□□□ -0.39
NEDD4L-230ENST00000590638 SCUBE3Q8IX30 993 aa12.6□□□□□ -0.39
NEDD4L-230ENST00000590638 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
NEDD4L-230ENST00000590638 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
NEDD4L-230ENST00000590638 RNF19BQ6ZMZ0 732 aa12.59□□□□□ -0.39
NEDD4L-230ENST00000590638 HMX1Q9NP08 348 aaPredicted RBP12.59□□□□□ -0.39
NEDD4L-230ENST00000590638 SYNJ1O43426 1573 aa12.59□□□□□ -0.39
NEDD4L-230ENST00000590638 CCDC97Q96F63 343 aaPredicted RBP12.58□□□□□ -0.4
NEDD4L-230ENST00000590638 GJD4Q96KN9 370 aaPredicted RBP12.58□□□□□ -0.4
NEDD4L-230ENST00000590638 PDS5BQ9NTI5 1447 aa12.58□□□□□ -0.4
NEDD4L-230ENST00000590638 SALL2Q9Y467 1007 aaPredicted RBP12.58□□□□□ -0.4
NEDD4L-230ENST00000590638 TOP2BQ02880 1626 aa12.58□□□□□ -0.4
NEDD4L-230ENST00000590638 BIVM-ERCC5R4GMW8 1640 aa12.58□□□□□ -0.4
NEDD4L-230ENST00000590638 DESI1Q6ICB0 168 aa12.57□□□□□ -0.4
NEDD4L-230ENST00000590638 BRICD5Q6PL45 260 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms