RNA–Protein interactions for RNA: ENST00000590325.1

CALR-207, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-207ENST00000590325 ROCK2O75116 1388 aaKnown RBP20.46■□□□□ 0.87
CALR-207ENST00000590325 SLAIN2Q9P270 581 aa20.45■□□□□ 0.86
CALR-207ENST00000590325 SAFB2Q14151 953 aaKnown RBP eCLIP20.44■□□□□ 0.86
CALR-207ENST00000590325 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
CALR-207ENST00000590325 TRPM1Q7Z4N2 1603 aa20.43■□□□□ 0.86
CALR-207ENST00000590325 GPRASP1Q5JY77 1395 aa20.43■□□□□ 0.86
CALR-207ENST00000590325 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.42■□□□□ 0.86
CALR-207ENST00000590325 RALGAPBQ86X10 1494 aa20.42■□□□□ 0.86
CALR-207ENST00000590325 NALCNQ8IZF0 1738 aa20.41■□□□□ 0.86
CALR-207ENST00000590325 CARD11Q9BXL7 1154 aa20.39■□□□□ 0.85
CALR-207ENST00000590325 MST1RQ04912 1400 aa20.38■□□□□ 0.85
CALR-207ENST00000590325 MINK1Q8N4C8 1332 aaPredicted RBP20.37■□□□□ 0.85
CALR-207ENST00000590325 HIRIP3Q9BW71 556 aaPredicted RBP20.36■□□□□ 0.85
CALR-207ENST00000590325 CDC42BPGQ6DT37 1551 aa20.36■□□□□ 0.85
CALR-207ENST00000590325 CENPJQ9HC77 1338 aaPredicted RBP20.35■□□□□ 0.85
CALR-207ENST00000590325 ARHGEF28Q8N1W1 1705 aaKnown RBP20.34■□□□□ 0.85
CALR-207ENST00000590325 BRINP3Q76B58 766 aa20.34■□□□□ 0.85
CALR-207ENST00000590325 C1orf167Q5SNV9 1468 aa20.34■□□□□ 0.85
CALR-207ENST00000590325 NUTM2FA1L443 756 aa20.32■□□□□ 0.84
CALR-207ENST00000590325 HSPA1LP34931 641 aa20.32■□□□□ 0.84
CALR-207ENST00000590325 EIF3AQ14152 1382 aaKnown RBP20.32■□□□□ 0.84
CALR-207ENST00000590325 WASLO00401 505 aaPredicted RBP20.31■□□□□ 0.84
CALR-207ENST00000590325 ADGRB2O60241 1585 aa20.3■□□□□ 0.84
CALR-207ENST00000590325 ORAI2Q96SN7 254 aa20.3■□□□□ 0.84
CALR-207ENST00000590325 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
CALR-207ENST00000590325 ESCO1Q5FWF5 840 aa20.28■□□□□ 0.84
CALR-207ENST00000590325 CDK19Q9BWU1 502 aa20.27■□□□□ 0.84
CALR-207ENST00000590325 ANKARQ7Z5J8 1434 aa20.26■□□□□ 0.83
CALR-207ENST00000590325 PRR36Q9H6K5 1346 aa20.25■□□□□ 0.83
CALR-207ENST00000590325 FMN2Q9NZ56 1722 aa20.24■□□□□ 0.83
CALR-207ENST00000590325 ST20-MTHFSA0A0A6YYL1 179 aa20.23■□□□□ 0.83
CALR-207ENST00000590325 DDX17Q92841 729 aaKnown RBP20.23■□□□□ 0.83
CALR-207ENST00000590325 USP47Q96K76 1375 aa20.22■□□□□ 0.83
CALR-207ENST00000590325 TULP4Q9NRJ4 1543 aa20.22■□□□□ 0.83
CALR-207ENST00000590325 SBNO2Q9Y2G9 1366 aa20.21■□□□□ 0.83
CALR-207ENST00000590325 NUDT16Q96DE0 195 aaKnown RBP20.21■□□□□ 0.83
CALR-207ENST00000590325 EVC2Q86UK5 1308 aa20.21■□□□□ 0.83
CALR-207ENST00000590325 AHDC1Q5TGY3 1603 aaPredicted RBP20.2■□□□□ 0.82
CALR-207ENST00000590325 QRICH2Q9H0J4 1663 aa20.2■□□□□ 0.82
CALR-207ENST00000590325 FOXO3O43524 673 aa20.2■□□□□ 0.82
CALR-207ENST00000590325 SRPK2P78362 688 aaKnown RBP20.2■□□□□ 0.82
CALR-207ENST00000590325 TESK2Q96S53 571 aa20.2■□□□□ 0.82
CALR-207ENST00000590325 PHF8Q9UPP1 1060 aa20.2■□□□□ 0.82
CALR-207ENST00000590325 CABP2Q9NPB3 220 aa20.19■□□□□ 0.82
CALR-207ENST00000590325 ATP7BP35670 1465 aa20.18■□□□□ 0.82
CALR-207ENST00000590325 USP32Q8NFA0 1604 aa20.18■□□□□ 0.82
CALR-207ENST00000590325 CCDC61Q9Y6R9 512 aa20.17■□□□□ 0.82
CALR-207ENST00000590325 SOS2Q07890 1332 aaPredicted RBP20.17■□□□□ 0.82
CALR-207ENST00000590325 NPHP3Q7Z494 1330 aa20.17■□□□□ 0.82
CALR-207ENST00000590325 PMFBP1Q8TBY8 1022 aa20.16■□□□□ 0.82
CALR-207ENST00000590325 COL16A1Q07092 1604 aaPredicted RBP20.14■□□□□ 0.81
CALR-207ENST00000590325 XPCQ01831 940 aaPredicted RBP20.14■□□□□ 0.81
CALR-207ENST00000590325 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
CALR-207ENST00000590325 NHSL1Q5SYE7 1610 aa20.13■□□□□ 0.81
CALR-207ENST00000590325 SLC24A1O60721 1099 aa20.13■□□□□ 0.81
CALR-207ENST00000590325 PXDNQ92626 1479 aa20.12■□□□□ 0.81
CALR-207ENST00000590325 PLEKHG3A1L390 1219 aa20.12■□□□□ 0.81
CALR-207ENST00000590325 EIF4G2P78344 907 aaKnown RBP eCLIP20.12■□□□□ 0.81
CALR-207ENST00000590325 LRRC59Q96AG4 307 aaKnown RBP20.12■□□□□ 0.81
CALR-207ENST00000590325 JCADQ9P266 1359 aa20.11■□□□□ 0.81
CALR-207ENST00000590325 KIF1AQ12756 1690 aa20.11■□□□□ 0.81
CALR-207ENST00000590325 PSME1Q06323 249 aa20.11■□□□□ 0.81
CALR-207ENST00000590325 KRT28Q7Z3Y7 464 aa20.11■□□□□ 0.81
CALR-207ENST00000590325 NGDNQ8NEJ9 315 aaKnown RBP20.11■□□□□ 0.81
CALR-207ENST00000590325 HSPA5P11021 654 aaKnown RBP20.1■□□□□ 0.81
CALR-207ENST00000590325 CABP1Q9NZU7 370 aa20.1■□□□□ 0.81
CALR-207ENST00000590325 RGPD8O14715 1765 aaPredicted RBP20.1■□□□□ 0.81
CALR-207ENST00000590325 PPIP5K1Q6PFW1 1433 aa20.1■□□□□ 0.81
CALR-207ENST00000590325 ATAD2Q6PL18 1390 aa20.09■□□□□ 0.81
CALR-207ENST00000590325 PUS7Q96PZ0 661 aaKnown RBP20.09■□□□□ 0.81
CALR-207ENST00000590325 POLR3AO14802 1390 aaPredicted RBP20.08■□□□□ 0.81
CALR-207ENST00000590325 ACEP12821 1306 aa20.08■□□□□ 0.81
CALR-207ENST00000590325 TMF1P82094 1093 aa20.08■□□□□ 0.81
CALR-207ENST00000590325 DISP3Q9P2K9 1392 aa20.08■□□□□ 0.8
CALR-207ENST00000590325 TOPAZ1Q8N9V7 1692 aa20.06■□□□□ 0.8
CALR-207ENST00000590325 SPATA31A3Q5VYP0 1347 aa20.05■□□□□ 0.8
CALR-207ENST00000590325 SBNO1A3KN83 1393 aa20.05■□□□□ 0.8
CALR-207ENST00000590325 PNPLA6Q8IY17 1366 aa20.05■□□□□ 0.8
CALR-207ENST00000590325 ITSN1Q15811 1721 aa20.03■□□□□ 0.8
CALR-207ENST00000590325 SPATA31A6Q5VVP1 1343 aa20.02■□□□□ 0.8
CALR-207ENST00000590325 CDCA8Q53HL2 280 aa20.02■□□□□ 0.8
CALR-207ENST00000590325 TMC1Q8TDI8 760 aa20.02■□□□□ 0.8
CALR-207ENST00000590325 TNS3Q68CZ2 1445 aa20.02■□□□□ 0.79
CALR-207ENST00000590325 SLC12A5Q9H2X9 1139 aa20.01■□□□□ 0.79
CALR-207ENST00000590325 PAK3O75914 559 aaPredicted RBP19.99■□□□□ 0.79
CALR-207ENST00000590325 SHPRHQ149N8 1683 aa19.98■□□□□ 0.79
CALR-207ENST00000590325 LMOD2Q6P5Q4 547 aa19.98■□□□□ 0.79
CALR-207ENST00000590325 ZNF692Q9BU19 519 aaPredicted RBP19.98■□□□□ 0.79
CALR-207ENST00000590325 CPSF1Q10570 1443 aaKnown RBP19.98■□□□□ 0.79
CALR-207ENST00000590325 ARHGEF10O15013 1369 aa19.97■□□□□ 0.79
CALR-207ENST00000590325 NINLQ9Y2I6 1382 aa19.97■□□□□ 0.79
CALR-207ENST00000590325 USP6P35125 1406 aa19.97■□□□□ 0.79
CALR-207ENST00000590325 NUTM2BA6NNL0 878 aaPredicted RBP19.97■□□□□ 0.79
CALR-207ENST00000590325 NUTM2EB1AL46 878 aaPredicted RBP19.97■□□□□ 0.79
CALR-207ENST00000590325 NUTM2AQ8IVF1 878 aaPredicted RBP19.97■□□□□ 0.79
CALR-207ENST00000590325 CD163L1Q9NR16 1453 aa19.96■□□□□ 0.79
CALR-207ENST00000590325 BRD4O60885 1362 aaPredicted RBP19.95■□□□□ 0.79
CALR-207ENST00000590325 SSH2Q76I76 1423 aa19.95■□□□□ 0.78
CALR-207ENST00000590325 TRPM3Q9HCF6 1732 aaPredicted RBP19.95■□□□□ 0.78
CALR-207ENST00000590325 LRP6O75581 1613 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms