RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 ZFYVE16Q7Z3T8 1539 aa10.68□□□□□ -0.7
SMAD4-210ENST00000590061 KDM6BO15054 1643 aa10.67□□□□□ -0.7
SMAD4-210ENST00000590061 RAPGEF3O95398 923 aa10.67□□□□□ -0.7
SMAD4-210ENST00000590061 PLPP6Q8IY26 295 aa10.67□□□□□ -0.7
SMAD4-210ENST00000590061 PCDHGA4Q9Y5G9 962 aa10.67□□□□□ -0.7
SMAD4-210ENST00000590061 PPRC1Q5VV67 1664 aaKnown RBP10.66□□□□□ -0.7
SMAD4-210ENST00000590061 BBXQ8WY36 941 aaPredicted RBP10.66□□□□□ -0.7
SMAD4-210ENST00000590061 TIMELESSQ9UNS1 1208 aa10.66□□□□□ -0.7
SMAD4-210ENST00000590061 RICTORQ6R327 1708 aa10.66□□□□□ -0.7
SMAD4-210ENST00000590061 A2MP01023 1474 aa10.66□□□□□ -0.7
SMAD4-210ENST00000590061 EIF2AK4Q9P2K8 1649 aaKnown RBP10.66□□□□□ -0.7
SMAD4-210ENST00000590061 ERBB3P21860 1342 aa10.65□□□□□ -0.7
SMAD4-210ENST00000590061 VARS2Q5ST30 1063 aaKnown RBP10.65□□□□□ -0.7
SMAD4-210ENST00000590061 PTCD2Q8WV60 388 aaKnown RBP10.65□□□□□ -0.7
SMAD4-210ENST00000590061 ATP10AO60312 1499 aa10.65□□□□□ -0.7
SMAD4-210ENST00000590061 REREQ9P2R6 1566 aa10.64□□□□□ -0.71
SMAD4-210ENST00000590061 NUP155O75694 1391 aa10.64□□□□□ -0.71
SMAD4-210ENST00000590061 FAM135AQ9P2D6 1515 aa10.63□□□□□ -0.71
SMAD4-210ENST00000590061 KIDINS220Q9ULH0 1771 aa10.62□□□□□ -0.71
SMAD4-210ENST00000590061 ZNF316A6NFI3 1004 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-210ENST00000590061 KIF3BO15066 747 aa10.62□□□□□ -0.71
SMAD4-210ENST00000590061 NUDT7P0C024 238 aa10.62□□□□□ -0.71
SMAD4-210ENST00000590061 CADPS2Q86UW7 1296 aa10.62□□□□□ -0.71
SMAD4-210ENST00000590061 MPHOSPH9Q99550 1183 aa10.62□□□□□ -0.71
SMAD4-210ENST00000590061 AGLP35573 1532 aa10.61□□□□□ -0.71
SMAD4-210ENST00000590061 KDM5DQ9BY66 1539 aa10.6□□□□□ -0.71
SMAD4-210ENST00000590061 MFSD10Q14728 455 aa10.6□□□□□ -0.71
SMAD4-210ENST00000590061 PPP1R15BQ5SWA1 713 aa10.6□□□□□ -0.71
SMAD4-210ENST00000590061 ESF1Q9H501 851 aaKnown RBP10.6□□□□□ -0.71
SMAD4-210ENST00000590061 BCORL1Q5H9F3 1711 aa10.6□□□□□ -0.71
SMAD4-210ENST00000590061 DHX57Q6P158 1386 aaKnown RBP10.59□□□□□ -0.71
SMAD4-210ENST00000590061 UNC13BO14795 1591 aa10.58□□□□□ -0.72
SMAD4-210ENST00000590061 PDE4AP27815 886 aa10.58□□□□□ -0.72
SMAD4-210ENST00000590061 SPNS2Q8IVW8 549 aa10.58□□□□□ -0.72
SMAD4-210ENST00000590061 ZNF687Q8N1G0 1237 aa10.58□□□□□ -0.72
SMAD4-210ENST00000590061 ARHGEF40Q8TER5 1519 aa10.58□□□□□ -0.72
SMAD4-210ENST00000590061 FRMPD1Q5SYB0 1578 aa10.57□□□□□ -0.72
SMAD4-210ENST00000590061 DIP2CQ9Y2E4 1556 aa10.57□□□□□ -0.72
SMAD4-210ENST00000590061 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
SMAD4-210ENST00000590061 LHX6Q9UPM6 363 aa10.57□□□□□ -0.72
SMAD4-210ENST00000590061 WASHC2CQ9Y4E1 1318 aa10.57□□□□□ -0.72
SMAD4-210ENST00000590061 RNF17Q9BXT8 1623 aaKnown RBP10.56□□□□□ -0.72
SMAD4-210ENST00000590061 STAC3Q96MF2 364 aa10.56□□□□□ -0.72
SMAD4-210ENST00000590061 DAXXQ9UER7 740 aaPredicted RBP10.56□□□□□ -0.72
SMAD4-210ENST00000590061 RPRD2Q5VT52 1461 aaKnown RBP10.55□□□□□ -0.72
SMAD4-210ENST00000590061 DEPDC5O75140 1603 aa10.55□□□□□ -0.72
SMAD4-210ENST00000590061 IQGAP3Q86VI3 1631 aa10.55□□□□□ -0.72
SMAD4-210ENST00000590061 ABCA6Q8N139 1617 aa10.55□□□□□ -0.72
SMAD4-210ENST00000590061 PRDM15P57071 1507 aaPredicted RBP10.55□□□□□ -0.72
SMAD4-210ENST00000590061 GGT6Q6P531 493 aa10.55□□□□□ -0.72
SMAD4-210ENST00000590061 CNTLNQ9NXG0 1405 aa10.55□□□□□ -0.72
SMAD4-210ENST00000590061 ARID4BQ4LE39 1312 aaPredicted RBP10.55□□□□□ -0.72
SMAD4-210ENST00000590061 COL17A1Q9UMD9 1497 aaPredicted RBP10.55□□□□□ -0.72
SMAD4-210ENST00000590061 LMTK2Q8IWU2 1503 aa10.54□□□□□ -0.72
SMAD4-210ENST00000590061 LARP6Q9BRS8 491 aaKnown RBP10.54□□□□□ -0.72
SMAD4-210ENST00000590061 YEATS2Q9ULM3 1422 aa10.54□□□□□ -0.72
SMAD4-210ENST00000590061 DDX27Q96GQ7 796 aaKnown RBP10.53□□□□□ -0.72
SMAD4-210ENST00000590061 ZC3H13Q5T200 1668 aaKnown RBP10.53□□□□□ -0.72
SMAD4-210ENST00000590061 ARHGAP31Q2M1Z3 1444 aa10.52□□□□□ -0.73
SMAD4-210ENST00000590061 POTEEQ6S8J3 1075 aa10.52□□□□□ -0.73
SMAD4-210ENST00000590061 PZPP20742 1482 aa10.52□□□□□ -0.73
SMAD4-210ENST00000590061 TET3O43151 1660 aa10.51□□□□□ -0.73
SMAD4-210ENST00000590061 VWDEQ8N2E2 1590 aa10.51□□□□□ -0.73
SMAD4-210ENST00000590061 ANKRD30BQ9BXX2 1392 aa10.51□□□□□ -0.73
SMAD4-210ENST00000590061 MMRN1Q13201 1228 aa10.5□□□□□ -0.73
SMAD4-210ENST00000590061 SPRYD3Q8NCJ5 442 aa10.5□□□□□ -0.73
SMAD4-210ENST00000590061 SLC52A1Q9NWF4 448 aa10.5□□□□□ -0.73
SMAD4-210ENST00000590061 CCDC144AA2RUR9 1427 aa10.5□□□□□ -0.73
SMAD4-210ENST00000590061 UPF1Q92900 1129 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMAD4-210ENST00000590061 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.49□□□□□ -0.73
SMAD4-210ENST00000590061 TONSLQ96HA7 1378 aa10.49□□□□□ -0.73
SMAD4-210ENST00000590061 EMILIN3Q9NT22 766 aa10.48□□□□□ -0.73
SMAD4-210ENST00000590061 TBC1D12O60347 775 aa10.47□□□□□ -0.73
SMAD4-210ENST00000590061 ABCC3O15438 1527 aa10.47□□□□□ -0.73
SMAD4-210ENST00000590061 EFCAB6Q5THR3 1501 aa10.47□□□□□ -0.73
SMAD4-210ENST00000590061 HDGFP51858 240 aaKnown RBP10.46□□□□□ -0.73
SMAD4-210ENST00000590061 CAMK2BQ13554 666 aa10.46□□□□□ -0.73
SMAD4-210ENST00000590061 PTPRTO14522 1441 aa10.46□□□□□ -0.74
SMAD4-210ENST00000590061 PSDA5PKW4 1024 aaPredicted RBP10.45□□□□□ -0.74
SMAD4-210ENST00000590061 MROH1Q8NDA8 1641 aa10.44□□□□□ -0.74
SMAD4-210ENST00000590061 PBX2P40425 430 aa10.44□□□□□ -0.74
SMAD4-210ENST00000590061 NEUROD1Q13562 356 aa10.44□□□□□ -0.74
SMAD4-210ENST00000590061 PAXIP1Q6ZW49 1069 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-210ENST00000590061 NEURL4Q96JN8 1562 aa10.43□□□□□ -0.74
SMAD4-210ENST00000590061 RPGRIP1LQ68CZ1 1315 aa10.43□□□□□ -0.74
SMAD4-210ENST00000590061 ANO8Q9HCE9 1232 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-210ENST00000590061 MROH2AA6NES4 1674 aa10.43□□□□□ -0.74
SMAD4-210ENST00000590061 TRPM2O94759 1503 aa10.43□□□□□ -0.74
SMAD4-210ENST00000590061 ZMYM3Q14202 1370 aa10.42□□□□□ -0.74
SMAD4-210ENST00000590061 LSM11P83369 360 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMAD4-210ENST00000590061 MLECQ14165 292 aa10.42□□□□□ -0.74
SMAD4-210ENST00000590061 CAMSAP1Q5T5Y3 1602 aa10.42□□□□□ -0.74
SMAD4-210ENST00000590061 NPATQ14207 1427 aa10.41□□□□□ -0.74
SMAD4-210ENST00000590061 SPHKAPQ2M3C7 1700 aa10.41□□□□□ -0.74
SMAD4-210ENST00000590061 NOS1P29475 1434 aa10.41□□□□□ -0.74
SMAD4-210ENST00000590061 E9PCH4 1651 aa10.41□□□□□ -0.74
SMAD4-210ENST00000590061 SETD1BQ9UPS6 1966 aaKnown RBP10.4□□□□□ -0.74
SMAD4-210ENST00000590061 CFAP44Q96MT7 982 aa10.4□□□□□ -0.74
SMAD4-210ENST00000590061 AXIN2Q9Y2T1 843 aa10.4□□□□□ -0.74
SMAD4-210ENST00000590061 CEP152O94986 1710 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms