RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 KIF1BO60333 1816 aa19.62■□□□□ 0.73
PRKCSH-210ENST00000589990 PXDNQ92626 1479 aa19.62■□□□□ 0.73
PRKCSH-210ENST00000589990 GLI3P10071 1580 aa19.59■□□□□ 0.73
PRKCSH-210ENST00000589990 ESCO1Q5FWF5 840 aa19.58■□□□□ 0.72
PRKCSH-210ENST00000589990 PPARGC1BQ86YN6 1023 aaKnown RBP19.58■□□□□ 0.72
PRKCSH-210ENST00000589990 GJD4Q96KN9 370 aaPredicted RBP19.58■□□□□ 0.72
PRKCSH-210ENST00000589990 PRAG1Q86YV5 1406 aa19.58■□□□□ 0.72
PRKCSH-210ENST00000589990 FOXO3O43524 673 aa19.57■□□□□ 0.72
PRKCSH-210ENST00000589990 DEFB132Q7Z7B7 95 aa19.57■□□□□ 0.72
PRKCSH-210ENST00000589990 BRWD3Q6RI45 1802 aa19.57■□□□□ 0.72
PRKCSH-210ENST00000589990 CCDC125Q86Z20 511 aa19.56■□□□□ 0.72
PRKCSH-210ENST00000589990 NPHP3Q7Z494 1330 aa19.55■□□□□ 0.72
PRKCSH-210ENST00000589990 RALGAPBQ86X10 1494 aa19.55■□□□□ 0.72
PRKCSH-210ENST00000589990 NUTM2FA1L443 756 aa19.55■□□□□ 0.72
PRKCSH-210ENST00000589990 HFM1A2PYH4 1435 aa19.55■□□□□ 0.72
PRKCSH-210ENST00000589990 CDC42BPGQ6DT37 1551 aa19.55■□□□□ 0.72
PRKCSH-210ENST00000589990 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.54■□□□□ 0.72
PRKCSH-210ENST00000589990 PPLO60437 1756 aa19.53■□□□□ 0.72
PRKCSH-210ENST00000589990 VGFO15240 615 aaPredicted RBP19.53■□□□□ 0.72
PRKCSH-210ENST00000589990 FOXD1Q16676 465 aa19.53■□□□□ 0.72
PRKCSH-210ENST00000589990 BLMP54132 1417 aaPredicted RBP19.52■□□□□ 0.72
PRKCSH-210ENST00000589990 SLIT2O94813 1529 aa19.52■□□□□ 0.72
PRKCSH-210ENST00000589990 NAIPQ13075 1403 aa19.51■□□□□ 0.71
PRKCSH-210ENST00000589990 WAPLQ7Z5K2 1190 aa19.5■□□□□ 0.71
PRKCSH-210ENST00000589990 UNC5CLQ8IV45 518 aa19.5■□□□□ 0.71
PRKCSH-210ENST00000589990 PLEKHH1Q9ULM0 1364 aa19.48■□□□□ 0.71
PRKCSH-210ENST00000589990 USP32Q8NFA0 1604 aa19.47■□□□□ 0.71
PRKCSH-210ENST00000589990 STK26Q9P289 416 aa19.47■□□□□ 0.71
PRKCSH-210ENST00000589990 PLEKHG5O94827 1062 aa19.46■□□□□ 0.71
PRKCSH-210ENST00000589990 SEPT12Q8IYM1 358 aa19.46■□□□□ 0.71
PRKCSH-210ENST00000589990 SPATA31A3Q5VYP0 1347 aa19.46■□□□□ 0.71
PRKCSH-210ENST00000589990 ADGRF5Q8IZF2 1346 aa19.46■□□□□ 0.71
PRKCSH-210ENST00000589990 LRP5O75197 1615 aa19.45■□□□□ 0.7
PRKCSH-210ENST00000589990 CABLES1Q8TDN4 633 aa19.44■□□□□ 0.7
PRKCSH-210ENST00000589990 FMN2Q9NZ56 1722 aa19.44■□□□□ 0.7
PRKCSH-210ENST00000589990 RPGRIP1LQ68CZ1 1315 aa19.44■□□□□ 0.7
PRKCSH-210ENST00000589990 PSDA5PKW4 1024 aaPredicted RBP19.43■□□□□ 0.7
PRKCSH-210ENST00000589990 PLCH1Q4KWH8 1693 aa19.43■□□□□ 0.7
PRKCSH-210ENST00000589990 TMEM132EQ6IEE7 984 aa19.42■□□□□ 0.7
PRKCSH-210ENST00000589990 LRPPRCP42704 1394 aaKnown RBP19.42■□□□□ 0.7
PRKCSH-210ENST00000589990 RGPD8O14715 1765 aaPredicted RBP19.42■□□□□ 0.7
PRKCSH-210ENST00000589990 TECPR2O15040 1411 aa19.42■□□□□ 0.7
PRKCSH-210ENST00000589990 KRT28Q7Z3Y7 464 aa19.4■□□□□ 0.7
PRKCSH-210ENST00000589990 KIF1AQ12756 1690 aa19.4■□□□□ 0.7
PRKCSH-210ENST00000589990 ABCA3Q99758 1704 aa19.39■□□□□ 0.7
PRKCSH-210ENST00000589990 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.69
PRKCSH-210ENST00000589990 CCDC144AA2RUR9 1427 aa19.38■□□□□ 0.69
PRKCSH-210ENST00000589990 SF3B2Q13435 895 aaKnown RBP19.38■□□□□ 0.69
PRKCSH-210ENST00000589990 VPS72Q15906 364 aa19.38■□□□□ 0.69
PRKCSH-210ENST00000589990 KNDC1Q76NI1 1749 aa19.38■□□□□ 0.69
PRKCSH-210ENST00000589990 KRT27Q7Z3Y8 459 aa19.37■□□□□ 0.69
PRKCSH-210ENST00000589990 SLC4A1APQ9BWU0 796 aaKnown RBP19.37■□□□□ 0.69
PRKCSH-210ENST00000589990 CCDC9Q9Y3X0 531 aaKnown RBP19.37■□□□□ 0.69
PRKCSH-210ENST00000589990 IFT172Q9UG01 1749 aa19.37■□□□□ 0.69
PRKCSH-210ENST00000589990 NWD2Q9ULI1 1742 aa19.37■□□□□ 0.69
PRKCSH-210ENST00000589990 TNS3Q68CZ2 1445 aa19.36■□□□□ 0.69
PRKCSH-210ENST00000589990 ONECUT3O60422 494 aaPredicted RBP19.36■□□□□ 0.69
PRKCSH-210ENST00000589990 HRCP23327 699 aa19.36■□□□□ 0.69
PRKCSH-210ENST00000589990 RGL3Q3MIN7 710 aa19.36■□□□□ 0.69
PRKCSH-210ENST00000589990 ABCC11Q96J66 1382 aa19.35■□□□□ 0.69
PRKCSH-210ENST00000589990 HAP1P54257 671 aaPredicted RBP19.34■□□□□ 0.69
PRKCSH-210ENST00000589990 SPATA31E1Q6ZUB1 1445 aa19.34■□□□□ 0.69
PRKCSH-210ENST00000589990 FAM182BQ5T319 152 aa19.33■□□□□ 0.68
PRKCSH-210ENST00000589990 NRAPQ86VF7 1730 aa19.33■□□□□ 0.68
PRKCSH-210ENST00000589990 FAM83GA6ND36 823 aa19.32■□□□□ 0.68
PRKCSH-210ENST00000589990 LMOD2Q6P5Q4 547 aa19.32■□□□□ 0.68
PRKCSH-210ENST00000589990 PHF8Q9UPP1 1060 aa19.32■□□□□ 0.68
PRKCSH-210ENST00000589990 YTHDC2Q9H6S0 1430 aaKnown RBP19.32■□□□□ 0.68
PRKCSH-210ENST00000589990 FAM98CQ17RN3 349 aaKnown RBP19.31■□□□□ 0.68
PRKCSH-210ENST00000589990 PIK3C2GO75747 1445 aa19.31■□□□□ 0.68
PRKCSH-210ENST00000589990 A0A0G2JS52 829 aa19.3■□□□□ 0.68
PRKCSH-210ENST00000589990 MYT1Q01538 1121 aa19.3■□□□□ 0.68
PRKCSH-210ENST00000589990 EN1Q05925 392 aaPredicted RBP19.3■□□□□ 0.68
PRKCSH-210ENST00000589990 NRXN1Q9ULB1 1477 aa19.29■□□□□ 0.68
PRKCSH-210ENST00000589990 BAG6P46379 1132 aa19.29■□□□□ 0.68
PRKCSH-210ENST00000589990 SAFB2Q14151 953 aaKnown RBP eCLIP19.27■□□□□ 0.68
PRKCSH-210ENST00000589990 R3HDM1Q15032 1099 aaKnown RBP19.27■□□□□ 0.68
PRKCSH-210ENST00000589990 SBNO1A3KN83 1393 aa19.27■□□□□ 0.68
PRKCSH-210ENST00000589990 PSME1Q06323 249 aa19.26■□□□□ 0.67
PRKCSH-210ENST00000589990 PMFBP1Q8TBY8 1022 aa19.26■□□□□ 0.67
PRKCSH-210ENST00000589990 ANKRD30BQ9BXX2 1392 aa19.26■□□□□ 0.67
PRKCSH-210ENST00000589990 TNS1Q9HBL0 1735 aaKnown RBP19.25■□□□□ 0.67
PRKCSH-210ENST00000589990 BTG4Q9NY30 223 aa19.25■□□□□ 0.67
PRKCSH-210ENST00000589990 RGPD1P0DJD0 1748 aa19.25■□□□□ 0.67
PRKCSH-210ENST00000589990 TRPM3Q9HCF6 1732 aaPredicted RBP19.25■□□□□ 0.67
PRKCSH-210ENST00000589990 ARHGEF10O15013 1369 aa19.24■□□□□ 0.67
PRKCSH-210ENST00000589990 CFAP70Q5T0N1 1121 aa19.22■□□□□ 0.67
PRKCSH-210ENST00000589990 ALS2Q96Q42 1657 aa19.21■□□□□ 0.67
PRKCSH-210ENST00000589990 THSD7AQ9UPZ6 1657 aa19.21■□□□□ 0.67
PRKCSH-210ENST00000589990 EZH2Q15910 746 aaKnown RBP19.21■□□□□ 0.67
PRKCSH-210ENST00000589990 SIRT1Q96EB6 747 aa19.21■□□□□ 0.67
PRKCSH-210ENST00000589990 PRAM1Q96QH2 718 aa19.21■□□□□ 0.67
PRKCSH-210ENST00000589990 COL14A1Q05707 1796 aaKnown RBP19.21■□□□□ 0.67
PRKCSH-210ENST00000589990 C14orf93Q9H972 538 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-210ENST00000589990 CRYBG1Q9Y4K1 1723 aa19.2■□□□□ 0.66
PRKCSH-210ENST00000589990 SPATA31A5Q5VU36 1347 aa19.19■□□□□ 0.66
PRKCSH-210ENST00000589990 SPATA31A7Q8IWB4 1347 aa19.19■□□□□ 0.66
PRKCSH-210ENST00000589990 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
PRKCSH-210ENST00000589990 MPHOSPH9Q99550 1183 aa19.16■□□□□ 0.66
PRKCSH-210ENST00000589990 HIRIP3Q9BW71 556 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms