RNA–Protein interactions for RNA: ENST00000589877.5

SMAD2-211, Transcript of SMAD family member 2, humanhuman

TSL 3

Gene SMAD2, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-211ENST00000589877 PIK3C2GO75747 1445 aa24.82■■□□□ 1.56
SMAD2-211ENST00000589877 LAMC1P11047 1609 aa24.82■■□□□ 1.56
SMAD2-211ENST00000589877 RAB3GAP2Q9H2M9 1393 aa24.81■■□□□ 1.56
SMAD2-211ENST00000589877 TECPR2O15040 1411 aa24.81■■□□□ 1.56
SMAD2-211ENST00000589877 AFF2P51816 1311 aa24.81■■□□□ 1.56
SMAD2-211ENST00000589877 C14orf93Q9H972 538 aaKnown RBP24.8■■□□□ 1.56
SMAD2-211ENST00000589877 RXRBP28702 533 aa24.79■■□□□ 1.56
SMAD2-211ENST00000589877 ESCO1Q5FWF5 840 aa24.79■■□□□ 1.56
SMAD2-211ENST00000589877 C8orf37Q96NL8 207 aa24.78■■□□□ 1.56
SMAD2-211ENST00000589877 CDC42BPGQ6DT37 1551 aa24.76■■□□□ 1.55
SMAD2-211ENST00000589877 SIRT1Q96EB6 747 aa24.76■■□□□ 1.55
SMAD2-211ENST00000589877 PLEKHH1Q9ULM0 1364 aa24.76■■□□□ 1.55
SMAD2-211ENST00000589877 YTHDC2Q9H6S0 1430 aaKnown RBP24.76■■□□□ 1.55
SMAD2-211ENST00000589877 CFAP70Q5T0N1 1121 aa24.74■■□□□ 1.55
SMAD2-211ENST00000589877 KNDC1Q76NI1 1749 aa24.73■■□□□ 1.55
SMAD2-211ENST00000589877 NRXN1Q9ULB1 1477 aa24.73■■□□□ 1.55
SMAD2-211ENST00000589877 NPHP3Q7Z494 1330 aa24.73■■□□□ 1.55
SMAD2-211ENST00000589877 NUTM2FA1L443 756 aa24.73■■□□□ 1.55
SMAD2-211ENST00000589877 ADAMTS2O95450 1211 aa24.73■■□□□ 1.55
SMAD2-211ENST00000589877 QTRT2Q9H974 415 aaKnown RBP24.73■■□□□ 1.55
SMAD2-211ENST00000589877 FOXO3O43524 673 aa24.72■■□□□ 1.55
SMAD2-211ENST00000589877 NGLY1Q96IV0 654 aa24.72■■□□□ 1.55
SMAD2-211ENST00000589877 MYOM2P54296 1465 aa24.7■■□□□ 1.55
SMAD2-211ENST00000589877 DHX57Q6P158 1386 aaKnown RBP24.7■■□□□ 1.55
SMAD2-211ENST00000589877 HRCP23327 699 aa24.68■■□□□ 1.54
SMAD2-211ENST00000589877 CDK12Q9NYV4 1490 aaPredicted RBP24.68■■□□□ 1.54
SMAD2-211ENST00000589877 PXDNQ92626 1479 aa24.67■■□□□ 1.54
SMAD2-211ENST00000589877 RBM6P78332 1123 aaKnown RBP24.67■■□□□ 1.54
SMAD2-211ENST00000589877 XPCQ01831 940 aaPredicted RBP24.67■■□□□ 1.54
SMAD2-211ENST00000589877 UPF1Q92900 1129 aaKnown RBP eCLIP24.66■■□□□ 1.54
SMAD2-211ENST00000589877 COL22A1Q8NFW1 1626 aaPredicted RBP24.64■■□□□ 1.54
SMAD2-211ENST00000589877 FMN2Q9NZ56 1722 aa24.64■■□□□ 1.53
SMAD2-211ENST00000589877 FNBP4Q8N3X1 1017 aaPredicted RBP24.63■■□□□ 1.53
SMAD2-211ENST00000589877 PRAM1Q96QH2 718 aa24.63■■□□□ 1.53
SMAD2-211ENST00000589877 USP21Q9UK80 565 aa24.63■■□□□ 1.53
SMAD2-211ENST00000589877 KDM2AQ9Y2K7 1162 aa24.62■■□□□ 1.53
SMAD2-211ENST00000589877 SAFB2Q14151 953 aaKnown RBP eCLIP24.61■■□□□ 1.53
SMAD2-211ENST00000589877 DCAF11Q8TEB1 546 aa24.6■■□□□ 1.53
SMAD2-211ENST00000589877 KRT28Q7Z3Y7 464 aa24.59■■□□□ 1.53
SMAD2-211ENST00000589877 POGKQ9P215 609 aa24.59■■□□□ 1.53
SMAD2-211ENST00000589877 STAC3Q96MF2 364 aa24.58■■□□□ 1.53
SMAD2-211ENST00000589877 TRPC5Q9UL62 973 aaPredicted RBP24.58■■□□□ 1.53
SMAD2-211ENST00000589877 PHF8Q9UPP1 1060 aa24.58■■□□□ 1.53
SMAD2-211ENST00000589877 SPATA31A3Q5VYP0 1347 aa24.58■■□□□ 1.52
SMAD2-211ENST00000589877 DLC1Q96QB1 1528 aa24.56■■□□□ 1.52
SMAD2-211ENST00000589877 RGS12O14924 1447 aa24.56■■□□□ 1.52
SMAD2-211ENST00000589877 RGPD8O14715 1765 aaPredicted RBP24.56■■□□□ 1.52
SMAD2-211ENST00000589877 KIF1AQ12756 1690 aa24.56■■□□□ 1.52
SMAD2-211ENST00000589877 TRAK1Q9UPV9 953 aa24.55■■□□□ 1.52
SMAD2-211ENST00000589877 ADGRB1O14514 1584 aa24.54■■□□□ 1.52
SMAD2-211ENST00000589877 PSME1Q06323 249 aa24.53■■□□□ 1.52
SMAD2-211ENST00000589877 ATRNO75882 1429 aa24.52■■□□□ 1.52
SMAD2-211ENST00000589877 BCL9LQ86UU0 1499 aa24.51■■□□□ 1.51
SMAD2-211ENST00000589877 MARF1Q9Y4F3 1742 aaKnown RBP24.51■■□□□ 1.51
SMAD2-211ENST00000589877 HIRIP3Q9BW71 556 aaPredicted RBP24.49■■□□□ 1.51
SMAD2-211ENST00000589877 PMFBP1Q8TBY8 1022 aa24.48■■□□□ 1.51
SMAD2-211ENST00000589877 MINK1Q8N4C8 1332 aaPredicted RBP24.47■■□□□ 1.51
SMAD2-211ENST00000589877 TNS3Q68CZ2 1445 aa24.46■■□□□ 1.51
SMAD2-211ENST00000589877 ANKARQ7Z5J8 1434 aa24.46■■□□□ 1.51
SMAD2-211ENST00000589877 SBNO1A3KN83 1393 aa24.46■■□□□ 1.51
SMAD2-211ENST00000589877 USP32Q8NFA0 1604 aa24.46■■□□□ 1.51
SMAD2-211ENST00000589877 ADGRB2O60241 1585 aa24.46■■□□□ 1.51
SMAD2-211ENST00000589877 GJD4Q96KN9 370 aaPredicted RBP24.45■■□□□ 1.5
SMAD2-211ENST00000589877 WASLO00401 505 aaPredicted RBP24.44■■□□□ 1.5
SMAD2-211ENST00000589877 UNC5CLQ8IV45 518 aa24.44■■□□□ 1.5
SMAD2-211ENST00000589877 CABLES1Q8TDN4 633 aa24.44■■□□□ 1.5
SMAD2-211ENST00000589877 LMOD2Q6P5Q4 547 aa24.43■■□□□ 1.5
SMAD2-211ENST00000589877 HAP1P54257 671 aaPredicted RBP24.42■■□□□ 1.5
SMAD2-211ENST00000589877 SLIT2O94813 1529 aa24.41■■□□□ 1.5
SMAD2-211ENST00000589877 PRR36Q9H6K5 1346 aa24.41■■□□□ 1.5
SMAD2-211ENST00000589877 PLEKHG5O94827 1062 aa24.41■■□□□ 1.5
SMAD2-211ENST00000589877 ATAD2Q6PL18 1390 aa24.41■■□□□ 1.5
SMAD2-211ENST00000589877 ARHGEF10O15013 1369 aa24.4■■□□□ 1.5
SMAD2-211ENST00000589877 EIF3AQ14152 1382 aaKnown RBP24.4■■□□□ 1.5
SMAD2-211ENST00000589877 TULP4Q9NRJ4 1543 aa24.37■■□□□ 1.49
SMAD2-211ENST00000589877 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.37■■□□□ 1.49
SMAD2-211ENST00000589877 GPRASP1Q5JY77 1395 aa24.36■■□□□ 1.49
SMAD2-211ENST00000589877 NGDNQ8NEJ9 315 aaKnown RBP24.35■■□□□ 1.49
SMAD2-211ENST00000589877 ARHGEF28Q8N1W1 1705 aaKnown RBP24.34■■□□□ 1.49
SMAD2-211ENST00000589877 RALGAPBQ86X10 1494 aa24.33■■□□□ 1.49
SMAD2-211ENST00000589877 FAM83GA6ND36 823 aa24.33■■□□□ 1.49
SMAD2-211ENST00000589877 NUDT16Q96DE0 195 aaKnown RBP24.33■■□□□ 1.49
SMAD2-211ENST00000589877 TRPM3Q9HCF6 1732 aaPredicted RBP24.32■■□□□ 1.48
SMAD2-211ENST00000589877 VPS72Q15906 364 aa24.32■■□□□ 1.48
SMAD2-211ENST00000589877 GLI3P10071 1580 aa24.31■■□□□ 1.48
SMAD2-211ENST00000589877 NBPF1Q3BBV0 1214 aa24.31■■□□□ 1.48
SMAD2-211ENST00000589877 CDK19Q9BWU1 502 aa24.31■■□□□ 1.48
SMAD2-211ENST00000589877 ABCA3Q99758 1704 aa24.3■■□□□ 1.48
SMAD2-211ENST00000589877 KIAA1210Q9ULL0 1709 aa24.3■■□□□ 1.48
SMAD2-211ENST00000589877 ALS2Q96Q42 1657 aa24.28■■□□□ 1.48
SMAD2-211ENST00000589877 PAK3O75914 559 aaPredicted RBP24.28■■□□□ 1.48
SMAD2-211ENST00000589877 CCDC125Q86Z20 511 aa24.28■■□□□ 1.48
SMAD2-211ENST00000589877 NWD2Q9ULI1 1742 aa24.27■■□□□ 1.48
SMAD2-211ENST00000589877 CCDC9Q9Y3X0 531 aaKnown RBP24.27■■□□□ 1.48
SMAD2-211ENST00000589877 ATP7BP35670 1465 aa24.26■■□□□ 1.47
SMAD2-211ENST00000589877 ONECUT3O60422 494 aaPredicted RBP24.26■■□□□ 1.47
SMAD2-211ENST00000589877 SEPT12Q8IYM1 358 aa24.26■■□□□ 1.47
SMAD2-211ENST00000589877 PLCH1Q4KWH8 1693 aa24.26■■□□□ 1.47
SMAD2-211ENST00000589877 BTG4Q9NY30 223 aa24.24■■□□□ 1.47
SMAD2-211ENST00000589877 CCDC61Q9Y6R9 512 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms