RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 ROBO2Q9HCK4 1378 aa12.34□□□□□ -0.43
VAT1-207ENST00000589828 DEFB132Q7Z7B7 95 aa12.34□□□□□ -0.43
VAT1-207ENST00000589828 GJD4Q96KN9 370 aaPredicted RBP12.34□□□□□ -0.43
VAT1-207ENST00000589828 SLC4A1APQ9BWU0 796 aaKnown RBP12.32□□□□□ -0.44
VAT1-207ENST00000589828 LAMC1P11047 1609 aa12.32□□□□□ -0.44
VAT1-207ENST00000589828 NALCNQ8IZF0 1738 aa12.31□□□□□ -0.44
VAT1-207ENST00000589828 IQGAP3Q86VI3 1631 aa12.31□□□□□ -0.44
VAT1-207ENST00000589828 ROCK1Q13464 1354 aa12.3□□□□□ -0.44
VAT1-207ENST00000589828 XPCQ01831 940 aaPredicted RBP12.3□□□□□ -0.44
VAT1-207ENST00000589828 POTEDQ86YR6 584 aa12.3□□□□□ -0.44
VAT1-207ENST00000589828 BLMP54132 1417 aaPredicted RBP12.29□□□□□ -0.44
VAT1-207ENST00000589828 NEXMIFQ5QGS0 1516 aa12.28□□□□□ -0.44
VAT1-207ENST00000589828 ESCO1Q5FWF5 840 aa12.28□□□□□ -0.44
VAT1-207ENST00000589828 RALGAPBQ86X10 1494 aa12.27□□□□□ -0.44
VAT1-207ENST00000589828 PXDNQ92626 1479 aa12.27□□□□□ -0.44
VAT1-207ENST00000589828 FOXO3O43524 673 aa12.27□□□□□ -0.45
VAT1-207ENST00000589828 UNC5CLQ8IV45 518 aa12.27□□□□□ -0.45
VAT1-207ENST00000589828 NPHP3Q7Z494 1330 aa12.27□□□□□ -0.45
VAT1-207ENST00000589828 COL22A1Q8NFW1 1626 aaPredicted RBP12.26□□□□□ -0.45
VAT1-207ENST00000589828 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
VAT1-207ENST00000589828 PRAG1Q86YV5 1406 aa12.25□□□□□ -0.45
VAT1-207ENST00000589828 SLIT2O94813 1529 aa12.25□□□□□ -0.45
VAT1-207ENST00000589828 GLI3P10071 1580 aa12.25□□□□□ -0.45
VAT1-207ENST00000589828 EP400Q96L91 3159 aa12.25□□□□□ -0.45
VAT1-207ENST00000589828 NUTM2FA1L443 756 aa12.24□□□□□ -0.45
VAT1-207ENST00000589828 PSDA5PKW4 1024 aaPredicted RBP12.24□□□□□ -0.45
VAT1-207ENST00000589828 ITGAEP38570 1179 aa12.24□□□□□ -0.45
VAT1-207ENST00000589828 HFM1A2PYH4 1435 aa12.23□□□□□ -0.45
VAT1-207ENST00000589828 HRCP23327 699 aa12.23□□□□□ -0.45
VAT1-207ENST00000589828 CLTCL1P53675 1640 aa12.22□□□□□ -0.45
VAT1-207ENST00000589828 VGFO15240 615 aaPredicted RBP12.22□□□□□ -0.45
VAT1-207ENST00000589828 SPATA31A3Q5VYP0 1347 aa12.21□□□□□ -0.45
VAT1-207ENST00000589828 DCAF8L1A6NGE4 600 aa12.21□□□□□ -0.45
VAT1-207ENST00000589828 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
VAT1-207ENST00000589828 SF3B2Q13435 895 aaKnown RBP12.21□□□□□ -0.45
VAT1-207ENST00000589828 WAPLQ7Z5K2 1190 aa12.21□□□□□ -0.45
VAT1-207ENST00000589828 VPS72Q15906 364 aa12.2□□□□□ -0.46
VAT1-207ENST00000589828 NAIPQ13075 1403 aa12.2□□□□□ -0.46
VAT1-207ENST00000589828 LRP5O75197 1615 aa12.19□□□□□ -0.46
VAT1-207ENST00000589828 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
VAT1-207ENST00000589828 CABLES1Q8TDN4 633 aa12.19□□□□□ -0.46
VAT1-207ENST00000589828 SPHKAPQ2M3C7 1700 aa12.19□□□□□ -0.46
VAT1-207ENST00000589828 CDC42BPGQ6DT37 1551 aa12.18□□□□□ -0.46
VAT1-207ENST00000589828 LRPPRCP42704 1394 aaKnown RBP12.18□□□□□ -0.46
VAT1-207ENST00000589828 PLEKHH1Q9ULM0 1364 aa12.18□□□□□ -0.46
VAT1-207ENST00000589828 PLEKHG5O94827 1062 aa12.17□□□□□ -0.46
VAT1-207ENST00000589828 KRT28Q7Z3Y7 464 aa12.17□□□□□ -0.46
VAT1-207ENST00000589828 STK26Q9P289 416 aa12.17□□□□□ -0.46
VAT1-207ENST00000589828 RPGRIP1LQ68CZ1 1315 aa12.16□□□□□ -0.46
VAT1-207ENST00000589828 BAG6P46379 1132 aa12.16□□□□□ -0.46
VAT1-207ENST00000589828 CCDC9Q9Y3X0 531 aaKnown RBP12.16□□□□□ -0.46
VAT1-207ENST00000589828 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.16□□□□□ -0.46
VAT1-207ENST00000589828 ADGRF5Q8IZF2 1346 aa12.15□□□□□ -0.46
VAT1-207ENST00000589828 FAM83GA6ND36 823 aa12.15□□□□□ -0.46
VAT1-207ENST00000589828 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
VAT1-207ENST00000589828 R3HDM1Q15032 1099 aaKnown RBP12.14□□□□□ -0.47
VAT1-207ENST00000589828 FAM182BQ5T319 152 aa12.14□□□□□ -0.47
VAT1-207ENST00000589828 MARF1Q9Y4F3 1742 aaKnown RBP12.14□□□□□ -0.47
VAT1-207ENST00000589828 BRWD3Q6RI45 1802 aa12.14□□□□□ -0.47
VAT1-207ENST00000589828 TECPR2O15040 1411 aa12.13□□□□□ -0.47
VAT1-207ENST00000589828 USP32Q8NFA0 1604 aa12.13□□□□□ -0.47
VAT1-207ENST00000589828 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
VAT1-207ENST00000589828 FAM98CQ17RN3 349 aaKnown RBP12.13□□□□□ -0.47
VAT1-207ENST00000589828 TMEM132EQ6IEE7 984 aa12.13□□□□□ -0.47
VAT1-207ENST00000589828 CCDC144AA2RUR9 1427 aa12.12□□□□□ -0.47
VAT1-207ENST00000589828 TNS3Q68CZ2 1445 aa12.12□□□□□ -0.47
VAT1-207ENST00000589828 ABCC11Q96J66 1382 aa12.12□□□□□ -0.47
VAT1-207ENST00000589828 A0A0G2JS52 829 aa12.11□□□□□ -0.47
VAT1-207ENST00000589828 MYT1Q01538 1121 aa12.11□□□□□ -0.47
VAT1-207ENST00000589828 PPARGC1BQ86YN6 1023 aaKnown RBP12.11□□□□□ -0.47
VAT1-207ENST00000589828 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
VAT1-207ENST00000589828 EZH2Q15910 746 aaKnown RBP12.1□□□□□ -0.47
VAT1-207ENST00000589828 SBNO1A3KN83 1393 aa12.09□□□□□ -0.47
VAT1-207ENST00000589828 PSME1Q06323 249 aa12.09□□□□□ -0.47
VAT1-207ENST00000589828 LMOD2Q6P5Q4 547 aa12.09□□□□□ -0.47
VAT1-207ENST00000589828 BTG4Q9NY30 223 aa12.08□□□□□ -0.48
VAT1-207ENST00000589828 DISP2A7MBM2 1401 aa12.07□□□□□ -0.48
VAT1-207ENST00000589828 YY1P25490 414 aa12.07□□□□□ -0.48
VAT1-207ENST00000589828 RGL3Q3MIN7 710 aa12.07□□□□□ -0.48
VAT1-207ENST00000589828 CAMKK2Q96RR4 588 aa12.07□□□□□ -0.48
VAT1-207ENST00000589828 RRBP1Q9P2E9 1410 aaKnown RBP12.07□□□□□ -0.48
VAT1-207ENST00000589828 KIF1BO60333 1816 aa12.07□□□□□ -0.48
VAT1-207ENST00000589828 SPATA31A5Q5VU36 1347 aa12.06□□□□□ -0.48
VAT1-207ENST00000589828 SPATA31A7Q8IWB4 1347 aa12.06□□□□□ -0.48
VAT1-207ENST00000589828 ARHGEF10O15013 1369 aa12.05□□□□□ -0.48
VAT1-207ENST00000589828 YTHDC2Q9H6S0 1430 aaKnown RBP12.05□□□□□ -0.48
VAT1-207ENST00000589828 PMFBP1Q8TBY8 1022 aa12.05□□□□□ -0.48
VAT1-207ENST00000589828 SIRT1Q96EB6 747 aa12.05□□□□□ -0.48
VAT1-207ENST00000589828 NRXN1Q9ULB1 1477 aa12.05□□□□□ -0.48
VAT1-207ENST00000589828 FMN2Q9NZ56 1722 aa12.05□□□□□ -0.48
VAT1-207ENST00000589828 PPLO60437 1756 aa12.05□□□□□ -0.48
VAT1-207ENST00000589828 SPATA31E1Q6ZUB1 1445 aa12.04□□□□□ -0.48
VAT1-207ENST00000589828 PLCH1Q4KWH8 1693 aa12.04□□□□□ -0.48
VAT1-207ENST00000589828 KIF1AQ12756 1690 aa12.03□□□□□ -0.48
VAT1-207ENST00000589828 NWD2Q9ULI1 1742 aa12.03□□□□□ -0.48
VAT1-207ENST00000589828 TRIM37O94972 964 aa12.03□□□□□ -0.48
VAT1-207ENST00000589828 SAFB2Q14151 953 aaKnown RBP eCLIP12.03□□□□□ -0.48
VAT1-207ENST00000589828 ANKRD30BQ9BXX2 1392 aa12.03□□□□□ -0.48
VAT1-207ENST00000589828 PIK3C2GO75747 1445 aa12.03□□□□□ -0.48
VAT1-207ENST00000589828 PRAM1Q96QH2 718 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms