RNA–Protein interactions for RNA: ENST00000589369.2

AP3D1-207, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-207ENST00000589369 SOS2Q07890 1332 aaPredicted RBP25.34■■□□□ 1.65
AP3D1-207ENST00000589369 ACIN1Q9UKV3 1341 aaKnown RBP25.34■■□□□ 1.65
AP3D1-207ENST00000589369 RAB3GAP2Q9H2M9 1393 aa25.33■■□□□ 1.65
AP3D1-207ENST00000589369 WAPLQ7Z5K2 1190 aa25.33■■□□□ 1.65
AP3D1-207ENST00000589369 AFF2P51816 1311 aa25.32■■□□□ 1.64
AP3D1-207ENST00000589369 ABCC11Q96J66 1382 aa25.31■■□□□ 1.64
AP3D1-207ENST00000589369 KNDC1Q76NI1 1749 aa25.31■■□□□ 1.64
AP3D1-207ENST00000589369 PLEKHH1Q9ULM0 1364 aa25.31■■□□□ 1.64
AP3D1-207ENST00000589369 YTHDC2Q9H6S0 1430 aaKnown RBP25.28■■□□□ 1.64
AP3D1-207ENST00000589369 NRXN1Q9ULB1 1477 aa25.28■■□□□ 1.64
AP3D1-207ENST00000589369 C8orf37Q96NL8 207 aa25.27■■□□□ 1.64
AP3D1-207ENST00000589369 ESCO1Q5FWF5 840 aa25.26■■□□□ 1.63
AP3D1-207ENST00000589369 C14orf93Q9H972 538 aaKnown RBP25.26■■□□□ 1.63
AP3D1-207ENST00000589369 MYOM2P54296 1465 aa25.26■■□□□ 1.63
AP3D1-207ENST00000589369 RXRBP28702 533 aa25.25■■□□□ 1.63
AP3D1-207ENST00000589369 PXDNQ92626 1479 aa25.23■■□□□ 1.63
AP3D1-207ENST00000589369 NUTM2FA1L443 756 aa25.23■■□□□ 1.63
AP3D1-207ENST00000589369 ADAMTS2O95450 1211 aa25.23■■□□□ 1.63
AP3D1-207ENST00000589369 CFAP70Q5T0N1 1121 aa25.23■■□□□ 1.63
AP3D1-207ENST00000589369 NPHP3Q7Z494 1330 aa25.21■■□□□ 1.63
AP3D1-207ENST00000589369 COL22A1Q8NFW1 1626 aaPredicted RBP25.21■■□□□ 1.63
AP3D1-207ENST00000589369 CDK12Q9NYV4 1490 aaPredicted RBP25.21■■□□□ 1.63
AP3D1-207ENST00000589369 FMN2Q9NZ56 1722 aa25.2■■□□□ 1.63
AP3D1-207ENST00000589369 FOXO3O43524 673 aa25.2■■□□□ 1.62
AP3D1-207ENST00000589369 XPCQ01831 940 aaPredicted RBP25.19■■□□□ 1.62
AP3D1-207ENST00000589369 SIRT1Q96EB6 747 aa25.19■■□□□ 1.62
AP3D1-207ENST00000589369 NGLY1Q96IV0 654 aa25.18■■□□□ 1.62
AP3D1-207ENST00000589369 QTRT2Q9H974 415 aaKnown RBP25.17■■□□□ 1.62
AP3D1-207ENST00000589369 DHX57Q6P158 1386 aaKnown RBP25.17■■□□□ 1.62
AP3D1-207ENST00000589369 UPF1Q92900 1129 aaKnown RBP eCLIP25.15■■□□□ 1.62
AP3D1-207ENST00000589369 RGS12O14924 1447 aa25.14■■□□□ 1.62
AP3D1-207ENST00000589369 RBM6P78332 1123 aaKnown RBP25.13■■□□□ 1.61
AP3D1-207ENST00000589369 PRAM1Q96QH2 718 aa25.12■■□□□ 1.61
AP3D1-207ENST00000589369 KIF1AQ12756 1690 aa25.11■■□□□ 1.61
AP3D1-207ENST00000589369 ADGRB1O14514 1584 aa25.11■■□□□ 1.61
AP3D1-207ENST00000589369 SAFB2Q14151 953 aaKnown RBP eCLIP25.1■■□□□ 1.61
AP3D1-207ENST00000589369 FNBP4Q8N3X1 1017 aaPredicted RBP25.1■■□□□ 1.61
AP3D1-207ENST00000589369 USP21Q9UK80 565 aa25.1■■□□□ 1.61
AP3D1-207ENST00000589369 DLC1Q96QB1 1528 aa25.1■■□□□ 1.61
AP3D1-207ENST00000589369 RGPD8O14715 1765 aaPredicted RBP25.1■■□□□ 1.61
AP3D1-207ENST00000589369 HRCP23327 699 aa25.09■■□□□ 1.61
AP3D1-207ENST00000589369 SPATA31A3Q5VYP0 1347 aa25.07■■□□□ 1.6
AP3D1-207ENST00000589369 DCAF11Q8TEB1 546 aa25.06■■□□□ 1.6
AP3D1-207ENST00000589369 KDM2AQ9Y2K7 1162 aa25.06■■□□□ 1.6
AP3D1-207ENST00000589369 MARF1Q9Y4F3 1742 aaKnown RBP25.06■■□□□ 1.6
AP3D1-207ENST00000589369 ATRNO75882 1429 aa25.05■■□□□ 1.6
AP3D1-207ENST00000589369 KRT28Q7Z3Y7 464 aa25.05■■□□□ 1.6
AP3D1-207ENST00000589369 PHF8Q9UPP1 1060 aa25.05■■□□□ 1.6
AP3D1-207ENST00000589369 POGKQ9P215 609 aa25.04■■□□□ 1.6
AP3D1-207ENST00000589369 TRPC5Q9UL62 973 aaPredicted RBP25.04■■□□□ 1.6
AP3D1-207ENST00000589369 TRAK1Q9UPV9 953 aa25.03■■□□□ 1.6
AP3D1-207ENST00000589369 USP32Q8NFA0 1604 aa25.03■■□□□ 1.6
AP3D1-207ENST00000589369 BCL9LQ86UU0 1499 aa25.02■■□□□ 1.6
AP3D1-207ENST00000589369 ADGRB2O60241 1585 aa25.02■■□□□ 1.6
AP3D1-207ENST00000589369 TNS3Q68CZ2 1445 aa24.99■■□□□ 1.59
AP3D1-207ENST00000589369 ANKARQ7Z5J8 1434 aa24.99■■□□□ 1.59
AP3D1-207ENST00000589369 HIRIP3Q9BW71 556 aaPredicted RBP24.98■■□□□ 1.59
AP3D1-207ENST00000589369 STAC3Q96MF2 364 aa24.97■■□□□ 1.59
AP3D1-207ENST00000589369 MINK1Q8N4C8 1332 aaPredicted RBP24.96■■□□□ 1.59
AP3D1-207ENST00000589369 PSME1Q06323 249 aa24.96■■□□□ 1.59
AP3D1-207ENST00000589369 PMFBP1Q8TBY8 1022 aa24.96■■□□□ 1.59
AP3D1-207ENST00000589369 SBNO1A3KN83 1393 aa24.95■■□□□ 1.59
AP3D1-207ENST00000589369 SLIT2O94813 1529 aa24.95■■□□□ 1.58
AP3D1-207ENST00000589369 PRR36Q9H6K5 1346 aa24.94■■□□□ 1.58
AP3D1-207ENST00000589369 CABLES1Q8TDN4 633 aa24.94■■□□□ 1.58
AP3D1-207ENST00000589369 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.93■■□□□ 1.58
AP3D1-207ENST00000589369 GJD4Q96KN9 370 aaPredicted RBP24.91■■□□□ 1.58
AP3D1-207ENST00000589369 ARHGEF28Q8N1W1 1705 aaKnown RBP24.91■■□□□ 1.58
AP3D1-207ENST00000589369 ABCA3Q99758 1704 aa24.91■■□□□ 1.58
AP3D1-207ENST00000589369 TULP4Q9NRJ4 1543 aa24.91■■□□□ 1.58
AP3D1-207ENST00000589369 WASLO00401 505 aaPredicted RBP24.9■■□□□ 1.58
AP3D1-207ENST00000589369 PLEKHG5O94827 1062 aa24.9■■□□□ 1.58
AP3D1-207ENST00000589369 UNC5CLQ8IV45 518 aa24.9■■□□□ 1.58
AP3D1-207ENST00000589369 ATAD2Q6PL18 1390 aa24.9■■□□□ 1.58
AP3D1-207ENST00000589369 TRPM3Q9HCF6 1732 aaPredicted RBP24.89■■□□□ 1.58
AP3D1-207ENST00000589369 LMOD2Q6P5Q4 547 aa24.89■■□□□ 1.58
AP3D1-207ENST00000589369 ARHGEF10O15013 1369 aa24.89■■□□□ 1.57
AP3D1-207ENST00000589369 EIF3AQ14152 1382 aaKnown RBP24.88■■□□□ 1.57
AP3D1-207ENST00000589369 GLI3P10071 1580 aa24.88■■□□□ 1.57
AP3D1-207ENST00000589369 HAP1P54257 671 aaPredicted RBP24.87■■□□□ 1.57
AP3D1-207ENST00000589369 RALGAPBQ86X10 1494 aa24.87■■□□□ 1.57
AP3D1-207ENST00000589369 EP400Q96L91 3159 aa24.85■■□□□ 1.57
AP3D1-207ENST00000589369 PLCH1Q4KWH8 1693 aa24.84■■□□□ 1.57
AP3D1-207ENST00000589369 ALS2Q96Q42 1657 aa24.84■■□□□ 1.57
AP3D1-207ENST00000589369 GPRASP1Q5JY77 1395 aa24.82■■□□□ 1.56
AP3D1-207ENST00000589369 KIAA1210Q9ULL0 1709 aa24.82■■□□□ 1.56
AP3D1-207ENST00000589369 ATP7BP35670 1465 aa24.82■■□□□ 1.56
AP3D1-207ENST00000589369 NWD2Q9ULI1 1742 aa24.81■■□□□ 1.56
AP3D1-207ENST00000589369 FAM83GA6ND36 823 aa24.8■■□□□ 1.56
AP3D1-207ENST00000589369 VPS72Q15906 364 aa24.79■■□□□ 1.56
AP3D1-207ENST00000589369 NBPF1Q3BBV0 1214 aa24.79■■□□□ 1.56
AP3D1-207ENST00000589369 NGDNQ8NEJ9 315 aaKnown RBP24.79■■□□□ 1.56
AP3D1-207ENST00000589369 NUDT16Q96DE0 195 aaKnown RBP24.79■■□□□ 1.56
AP3D1-207ENST00000589369 ITSN1Q15811 1721 aa24.77■■□□□ 1.56
AP3D1-207ENST00000589369 CDK19Q9BWU1 502 aa24.76■■□□□ 1.55
AP3D1-207ENST00000589369 CRYBG1Q9Y4K1 1723 aa24.75■■□□□ 1.55
AP3D1-207ENST00000589369 BRWD3Q6RI45 1802 aa24.75■■□□□ 1.55
AP3D1-207ENST00000589369 NRAPQ86VF7 1730 aa24.75■■□□□ 1.55
AP3D1-207ENST00000589369 TOPAZ1Q8N9V7 1692 aa24.73■■□□□ 1.55
AP3D1-207ENST00000589369 PAK3O75914 559 aaPredicted RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms