RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-223ENST00000589266 NHSL1Q5SYE7 1610 aa35.89■■■■□ 3.34
CIRBP-223ENST00000589266 RBM6P78332 1123 aaKnown RBP35.88■■■■□ 3.33
CIRBP-223ENST00000589266 C8orf37Q96NL8 207 aa35.88■■■■□ 3.33
CIRBP-223ENST00000589266 XRN1Q8IZH2 1706 aaKnown RBP35.88■■■■□ 3.33
CIRBP-223ENST00000589266 NRXN1Q9ULB1 1477 aa35.86■■■■□ 3.33
CIRBP-223ENST00000589266 SETBP1Q9Y6X0 1596 aa35.84■■■■□ 3.33
CIRBP-223ENST00000589266 NRXN3Q9Y4C0 1643 aa35.83■■■■□ 3.33
CIRBP-223ENST00000589266 KDM2AQ9Y2K7 1162 aa35.83■■■■□ 3.33
CIRBP-223ENST00000589266 RGS12O14924 1447 aa35.82■■■■□ 3.32
CIRBP-223ENST00000589266 PRAG1Q86YV5 1406 aa35.82■■■■□ 3.32
CIRBP-223ENST00000589266 PNPLA6Q8IY17 1366 aa35.81■■■■□ 3.32
CIRBP-223ENST00000589266 DDX17Q92841 729 aaKnown RBP35.8■■■■□ 3.32
CIRBP-223ENST00000589266 METP08581 1390 aa35.79■■■■□ 3.32
CIRBP-223ENST00000589266 ADGRL3Q9HAR2 1447 aa35.78■■■■□ 3.32
CIRBP-223ENST00000589266 ADGRF5Q8IZF2 1346 aa35.77■■■■□ 3.32
CIRBP-223ENST00000589266 NGLY1Q96IV0 654 aa35.76■■■■□ 3.32
CIRBP-223ENST00000589266 PIK3C2GO75747 1445 aa35.75■■■■□ 3.31
CIRBP-223ENST00000589266 ADAMTS2O95450 1211 aa35.72■■■■□ 3.31
CIRBP-223ENST00000589266 KIAA1210Q9ULL0 1709 aa35.71■■■■□ 3.31
CIRBP-223ENST00000589266 NBPF8Q3BBV2 869 aa35.71■■■■□ 3.31
CIRBP-223ENST00000589266 SRCAPQ6ZRS2 3230 aa35.71■■■■□ 3.31
CIRBP-223ENST00000589266 LAMC1P11047 1609 aa35.68■■■■□ 3.3
CIRBP-223ENST00000589266 NALCNQ8IZF0 1738 aa35.67■■■■□ 3.3
CIRBP-223ENST00000589266 C14orf93Q9H972 538 aaKnown RBP35.66■■■■□ 3.3
CIRBP-223ENST00000589266 C1orf167Q5SNV9 1468 aa35.66■■■■□ 3.3
CIRBP-223ENST00000589266 TRPM1Q7Z4N2 1603 aa35.65■■■■□ 3.3
CIRBP-223ENST00000589266 RALGAPBQ86X10 1494 aa35.65■■■■□ 3.3
CIRBP-223ENST00000589266 ATAD2Q6PL18 1390 aa35.64■■■■□ 3.3
CIRBP-223ENST00000589266 USP21Q9UK80 565 aa35.63■■■■□ 3.29
CIRBP-223ENST00000589266 TRPC5Q9UL62 973 aaPredicted RBP35.61■■■■□ 3.29
CIRBP-223ENST00000589266 SOS2Q07890 1332 aaPredicted RBP35.6■■■■□ 3.29
CIRBP-223ENST00000589266 ORAI2Q96SN7 254 aa35.58■■■■□ 3.29
CIRBP-223ENST00000589266 GPRASP1Q5JY77 1395 aa35.57■■■■□ 3.28
CIRBP-223ENST00000589266 CFAP70Q5T0N1 1121 aa35.57■■■■□ 3.28
CIRBP-223ENST00000589266 FNBP4Q8N3X1 1017 aaPredicted RBP35.56■■■■□ 3.28
CIRBP-223ENST00000589266 PTCH1Q13635 1447 aa35.55■■■■□ 3.28
CIRBP-223ENST00000589266 ROCK2O75116 1388 aaKnown RBP35.53■■■■□ 3.28
CIRBP-223ENST00000589266 ZRANB1Q9UGI0 708 aa35.51■■■■□ 3.28
CIRBP-223ENST00000589266 ADGRB1O14514 1584 aa35.5■■■■□ 3.27
CIRBP-223ENST00000589266 ROBO2Q9HCK4 1378 aa35.5■■■■□ 3.27
CIRBP-223ENST00000589266 NBPF1Q3BBV0 1214 aa35.48■■■■□ 3.27
CIRBP-223ENST00000589266 ATRNO75882 1429 aa35.48■■■■□ 3.27
CIRBP-223ENST00000589266 CARD11Q9BXL7 1154 aa35.44■■■■□ 3.26
CIRBP-223ENST00000589266 CCDC125Q86Z20 511 aa35.43■■■■□ 3.26
CIRBP-223ENST00000589266 COL22A1Q8NFW1 1626 aaPredicted RBP35.43■■■■□ 3.26
CIRBP-223ENST00000589266 EP400Q96L91 3159 aa35.4■■■■□ 3.26
CIRBP-223ENST00000589266 NPHP3Q7Z494 1330 aa35.39■■■■□ 3.26
CIRBP-223ENST00000589266 YTHDC2Q9H6S0 1430 aaKnown RBP35.38■■■■□ 3.25
CIRBP-223ENST00000589266 LRPPRCP42704 1394 aaKnown RBP35.38■■■■□ 3.25
CIRBP-223ENST00000589266 ESCO1Q5FWF5 840 aa35.37■■■■□ 3.25
CIRBP-223ENST00000589266 TMEM132EQ6IEE7 984 aa35.37■■■■□ 3.25
CIRBP-223ENST00000589266 BCL9LQ86UU0 1499 aa35.35■■■■□ 3.25
CIRBP-223ENST00000589266 ABCC11Q96J66 1382 aa35.34■■■■□ 3.25
CIRBP-223ENST00000589266 GJD4Q96KN9 370 aaPredicted RBP35.33■■■■□ 3.25
CIRBP-223ENST00000589266 TECPR2O15040 1411 aa35.32■■■■□ 3.25
CIRBP-223ENST00000589266 KNDC1Q76NI1 1749 aa35.32■■■■□ 3.24
CIRBP-223ENST00000589266 EIF3AQ14152 1382 aaKnown RBP35.31■■■■□ 3.24
CIRBP-223ENST00000589266 DLC1Q96QB1 1528 aa35.31■■■■□ 3.24
CIRBP-223ENST00000589266 USP47Q96K76 1375 aa35.3■■■■□ 3.24
CIRBP-223ENST00000589266 EIF4G2P78344 907 aaKnown RBP eCLIP35.3■■■■□ 3.24
CIRBP-223ENST00000589266 SIRT1Q96EB6 747 aa35.3■■■■□ 3.24
CIRBP-223ENST00000589266 MARF1Q9Y4F3 1742 aaKnown RBP35.29■■■■□ 3.24
CIRBP-223ENST00000589266 FOXO3O43524 673 aa35.29■■■■□ 3.24
CIRBP-223ENST00000589266 PXDNQ92626 1479 aa35.29■■■■□ 3.24
CIRBP-223ENST00000589266 XPCQ01831 940 aaPredicted RBP35.27■■■■□ 3.24
CIRBP-223ENST00000589266 CDC42BPGQ6DT37 1551 aa35.26■■■■□ 3.24
CIRBP-223ENST00000589266 TRAK1Q9UPV9 953 aa35.23■■■■□ 3.23
CIRBP-223ENST00000589266 ARHGEF28Q8N1W1 1705 aaKnown RBP35.23■■■■□ 3.23
CIRBP-223ENST00000589266 STK26Q9P289 416 aa35.22■■■■□ 3.23
CIRBP-223ENST00000589266 UNC5CLQ8IV45 518 aa35.21■■■■□ 3.23
CIRBP-223ENST00000589266 HSPA5P11021 654 aaKnown RBP35.18■■■■□ 3.22
CIRBP-223ENST00000589266 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.18■■■■□ 3.22
CIRBP-223ENST00000589266 BLMP54132 1417 aaPredicted RBP35.17■■■■□ 3.22
CIRBP-223ENST00000589266 NUTM2FA1L443 756 aa35.17■■■■□ 3.22
CIRBP-223ENST00000589266 SLC24A1O60721 1099 aa35.16■■■■□ 3.22
CIRBP-223ENST00000589266 CENPJQ9HC77 1338 aaPredicted RBP35.15■■■■□ 3.22
CIRBP-223ENST00000589266 SBNO2Q9Y2G9 1366 aa35.14■■■■□ 3.22
CIRBP-223ENST00000589266 ST20-MTHFSA0A0A6YYL1 179 aa35.14■■■■□ 3.22
CIRBP-223ENST00000589266 WAPLQ7Z5K2 1190 aa35.14■■■■□ 3.22
CIRBP-223ENST00000589266 SLIT2O94813 1529 aa35.13■■■■□ 3.21
CIRBP-223ENST00000589266 SPATA31A3Q5VYP0 1347 aa35.11■■■■□ 3.21
CIRBP-223ENST00000589266 PRAM1Q96QH2 718 aa35.11■■■■□ 3.21
CIRBP-223ENST00000589266 POGKQ9P215 609 aa35.11■■■■□ 3.21
CIRBP-223ENST00000589266 GLI3P10071 1580 aa35.11■■■■□ 3.21
CIRBP-223ENST00000589266 SF3B2Q13435 895 aaKnown RBP35.09■■■■□ 3.21
CIRBP-223ENST00000589266 DEFB132Q7Z7B7 95 aa35.08■■■■□ 3.21
CIRBP-223ENST00000589266 QRICH2Q9H0J4 1663 aa35.07■■■■□ 3.2
CIRBP-223ENST00000589266 TESK2Q96S53 571 aa35.06■■■■□ 3.2
CIRBP-223ENST00000589266 BRWD3Q6RI45 1802 aa35.05■■■■□ 3.2
CIRBP-223ENST00000589266 KRT28Q7Z3Y7 464 aa35.05■■■■□ 3.2
CIRBP-223ENST00000589266 SEPT12Q8IYM1 358 aa35.04■■■■□ 3.2
CIRBP-223ENST00000589266 HAP1P54257 671 aaPredicted RBP35.03■■■■□ 3.2
CIRBP-223ENST00000589266 PLEKHH1Q9ULM0 1364 aa35.02■■■■□ 3.2
CIRBP-223ENST00000589266 USP32Q8NFA0 1604 aa35.02■■■■□ 3.2
CIRBP-223ENST00000589266 KIF1AQ12756 1690 aa35.01■■■■□ 3.2
CIRBP-223ENST00000589266 VPS72Q15906 364 aa35■■■■□ 3.19
CIRBP-223ENST00000589266 FMN2Q9NZ56 1722 aa35■■■■□ 3.19
CIRBP-223ENST00000589266 PSME1Q06323 249 aa34.97■■■■□ 3.19
CIRBP-223ENST00000589266 HIRIP3Q9BW71 556 aaPredicted RBP34.97■■■■□ 3.19
CIRBP-223ENST00000589266 ADGRB2O60241 1585 aa34.96■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms