RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 KDM4AO75164 1064 aa8.73□□□□□ -1.01
SMAD4-207ENST00000589076 AVPP01185 164 aa8.73□□□□□ -1.01
SMAD4-207ENST00000589076 USP46P62068 366 aa8.73□□□□□ -1.01
SMAD4-207ENST00000589076 RNF19BQ6ZMZ0 732 aa8.73□□□□□ -1.01
SMAD4-207ENST00000589076 USB1Q9BQ65 265 aaKnown RBP8.72□□□□□ -1.01
SMAD4-207ENST00000589076 C11orf95C9JLR9 678 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-207ENST00000589076 WNT7AO00755 349 aa8.71□□□□□ -1.02
SMAD4-207ENST00000589076 SLC24A1O60721 1099 aa8.71□□□□□ -1.02
SMAD4-207ENST00000589076 CD46P15529 392 aa8.71□□□□□ -1.02
SMAD4-207ENST00000589076 KRI1Q8N9T8 703 aaKnown RBP8.71□□□□□ -1.02
SMAD4-207ENST00000589076 SNIP1Q8TAD8 396 aaKnown RBP8.71□□□□□ -1.02
SMAD4-207ENST00000589076 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
SMAD4-207ENST00000589076 MMP16P51512 607 aa8.7□□□□□ -1.02
SMAD4-207ENST00000589076 TRIM32Q13049 653 aa8.7□□□□□ -1.02
SMAD4-207ENST00000589076 TREML4Q6UXN2 200 aa8.7□□□□□ -1.02
SMAD4-207ENST00000589076 SMCPP49901 116 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-207ENST00000589076 MINK1Q8N4C8 1332 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-207ENST00000589076 IRF6O14896 467 aa8.68□□□□□ -1.02
SMAD4-207ENST00000589076 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
SMAD4-207ENST00000589076 MDM2Q00987 491 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-207ENST00000589076 DXOO77932 396 aaKnown RBP8.66□□□□□ -1.02
SMAD4-207ENST00000589076 CLCN1P35523 988 aa8.66□□□□□ -1.02
SMAD4-207ENST00000589076 GMPR2Q9P2T1 348 aaKnown RBP8.66□□□□□ -1.02
SMAD4-207ENST00000589076 NUTM1Q86Y26 1132 aa8.65□□□□□ -1.02
SMAD4-207ENST00000589076 MRGPRX2Q96LB1 330 aa8.65□□□□□ -1.02
SMAD4-207ENST00000589076 SENP2Q9HC62 589 aa8.65□□□□□ -1.02
SMAD4-207ENST00000589076 GPCPD1Q9NPB8 672 aa8.64□□□□□ -1.03
SMAD4-207ENST00000589076 HOXA2O43364 376 aa8.63□□□□□ -1.03
SMAD4-207ENST00000589076 WFS1O76024 890 aa8.63□□□□□ -1.03
SMAD4-207ENST00000589076 SMPD1P17405 629 aa8.63□□□□□ -1.03
SMAD4-207ENST00000589076 WNT7BP56706 349 aa8.63□□□□□ -1.03
SMAD4-207ENST00000589076 DACH1Q9UI36 760 aa8.63□□□□□ -1.03
SMAD4-207ENST00000589076 RC3H1Q5TC82 1133 aaKnown RBP8.61□□□□□ -1.03
SMAD4-207ENST00000589076 VSIG10Q8N0Z9 540 aa8.61□□□□□ -1.03
SMAD4-207ENST00000589076 CCDC102AQ96A19 550 aa8.61□□□□□ -1.03
SMAD4-207ENST00000589076 KIFC2Q96AC6 838 aa8.61□□□□□ -1.03
SMAD4-207ENST00000589076 ATP13A2Q9NQ11 1180 aa8.61□□□□□ -1.03
SMAD4-207ENST00000589076 KDM2AQ9Y2K7 1162 aa8.61□□□□□ -1.03
SMAD4-207ENST00000589076 JUNDP17535 347 aa8.6□□□□□ -1.03
SMAD4-207ENST00000589076 J3QL48 77 aa8.59□□□□□ -1.03
SMAD4-207ENST00000589076 RETREG3Q86VR2 466 aa8.59□□□□□ -1.03
SMAD4-207ENST00000589076 NUDT12Q9BQG2 462 aa8.58□□□□□ -1.04
SMAD4-207ENST00000589076 FAM217BQ9NTX9 383 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-207ENST00000589076 C6orf229H3BNL8 230 aa8.57□□□□□ -1.04
SMAD4-207ENST00000589076 ALDH1A1P00352 501 aa8.57□□□□□ -1.04
SMAD4-207ENST00000589076 INSM1Q01101 510 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-207ENST00000589076 HLA-CQ95604 372 aa8.57□□□□□ -1.04
SMAD4-207ENST00000589076 TRIM47Q96LD4 638 aa8.57□□□□□ -1.04
SMAD4-207ENST00000589076 EHBP1Q8NDI1 1231 aa8.56□□□□□ -1.04
SMAD4-207ENST00000589076 HPS1Q92902 700 aa8.56□□□□□ -1.04
SMAD4-207ENST00000589076 WASF2Q9Y6W5 498 aa8.56□□□□□ -1.04
SMAD4-207ENST00000589076 FDX1P10109 184 aa8.55□□□□□ -1.04
SMAD4-207ENST00000589076 MS4A1P11836 297 aa8.54□□□□□ -1.04
SMAD4-207ENST00000589076 GUCA2AQ02747 115 aa8.54□□□□□ -1.04
SMAD4-207ENST00000589076 LCE2AQ5TA79 106 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-207ENST00000589076 SKOR1P84550 965 aa8.53□□□□□ -1.04
SMAD4-207ENST00000589076 SLC16A10Q8TF71 515 aa8.53□□□□□ -1.04
SMAD4-207ENST00000589076 SYMPKQ92797 1274 aaKnown RBP8.53□□□□□ -1.04
SMAD4-207ENST00000589076 STK17AQ9UEE5 414 aa8.53□□□□□ -1.04
SMAD4-207ENST00000589076 TERTO14746 1132 aaKnown RBP8.52□□□□□ -1.05
SMAD4-207ENST00000589076 CCNYL3P0C7X3 344 aa8.52□□□□□ -1.05
SMAD4-207ENST00000589076 SNRPBP14678 240 aaKnown RBP8.52□□□□□ -1.05
SMAD4-207ENST00000589076 NFX1Q12986 1120 aaKnown RBP8.52□□□□□ -1.05
SMAD4-207ENST00000589076 TTLL12Q14166 644 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-207ENST00000589076 SPDYE5A6NIY4 337 aa8.5□□□□□ -1.05
SMAD4-207ENST00000589076 WIPF1O43516 503 aa8.5□□□□□ -1.05
SMAD4-207ENST00000589076 SSTR3P32745 418 aaPredicted RBP8.5□□□□□ -1.05
SMAD4-207ENST00000589076 PLEKHG3A1L390 1219 aa8.49□□□□□ -1.05
SMAD4-207ENST00000589076 CAPN5O15484 640 aaPredicted RBP8.49□□□□□ -1.05
SMAD4-207ENST00000589076 PTPRNQ16849 979 aa8.49□□□□□ -1.05
SMAD4-207ENST00000589076 DIXDC1Q155Q3 683 aa8.48□□□□□ -1.05
SMAD4-207ENST00000589076 FAM181BA6NEQ2 426 aa8.47□□□□□ -1.05
SMAD4-207ENST00000589076 PTCRAQ6ISU1 281 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-207ENST00000589076 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMAD4-207ENST00000589076 SPIRE2Q8WWL2 714 aa8.47□□□□□ -1.05
SMAD4-207ENST00000589076 MTMR2Q13614 643 aa8.46□□□□□ -1.06
SMAD4-207ENST00000589076 UNC93B1Q9H1C4 597 aa8.46□□□□□ -1.06
SMAD4-207ENST00000589076 EVA1BQ9NVM1 165 aa8.46□□□□□ -1.06
SMAD4-207ENST00000589076 SIAH2O43255 324 aa8.45□□□□□ -1.06
SMAD4-207ENST00000589076 SH3BP2P78314 561 aa8.45□□□□□ -1.06
SMAD4-207ENST00000589076 KCNH2Q12809 1159 aa8.45□□□□□ -1.06
SMAD4-207ENST00000589076 PRR7Q8TB68 274 aa8.45□□□□□ -1.06
SMAD4-207ENST00000589076 PCDHGC3Q9UN70 934 aa8.45□□□□□ -1.06
SMAD4-207ENST00000589076 VARSP26640 1264 aaKnown RBP8.44□□□□□ -1.06
SMAD4-207ENST00000589076 DESI1Q6ICB0 168 aa8.44□□□□□ -1.06
SMAD4-207ENST00000589076 NXF1Q9UBU9 619 aaKnown RBP8.44□□□□□ -1.06
SMAD4-207ENST00000589076 NDUFV2P19404 249 aa8.43□□□□□ -1.06
SMAD4-207ENST00000589076 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
SMAD4-207ENST00000589076 NPAS3Q8IXF0 933 aa8.43□□□□□ -1.06
SMAD4-207ENST00000589076 BAP1Q92560 729 aa8.43□□□□□ -1.06
SMAD4-207ENST00000589076 MOXD2PA6NHM9 499 aa8.42□□□□□ -1.06
SMAD4-207ENST00000589076 BMP1P13497 986 aa8.42□□□□□ -1.06
SMAD4-207ENST00000589076 CTHP32929 405 aa8.42□□□□□ -1.06
SMAD4-207ENST00000589076 BARGINQ6ZT62 677 aa8.42□□□□□ -1.06
SMAD4-207ENST00000589076 ZNF511Q8NB15 262 aa8.42□□□□□ -1.06
SMAD4-207ENST00000589076 IRF7Q92985 503 aa8.42□□□□□ -1.06
SMAD4-207ENST00000589076 GJA5P36382 358 aa8.41□□□□□ -1.06
SMAD4-207ENST00000589076 SCARF1Q14162 830 aa8.41□□□□□ -1.06
SMAD4-207ENST00000589076 AMHR2Q16671 573 aa8.41□□□□□ -1.06
SMAD4-207ENST00000589076 GIGYF2Q6Y7W6 1299 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 462.8 ms