RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 ROBO1Q9Y6N7 1651 aa18.61■□□□□ 0.57
NEDD4L-223ENST00000588516 PROSER2Q86WR7 435 aaPredicted RBP18.61■□□□□ 0.57
NEDD4L-223ENST00000588516 RCAN3Q9UKA8 241 aa18.61■□□□□ 0.57
NEDD4L-223ENST00000588516 RRP1P56182 461 aaKnown RBP18.6■□□□□ 0.57
NEDD4L-223ENST00000588516 MEX3CQ5U5Q3 659 aaKnown RBP18.6■□□□□ 0.57
NEDD4L-223ENST00000588516 RBM33Q96EV2 1170 aaKnown RBP18.6■□□□□ 0.57
NEDD4L-223ENST00000588516 ERVK-7P63135 1459 aa18.6■□□□□ 0.57
NEDD4L-223ENST00000588516 JCADQ9P266 1359 aa18.6■□□□□ 0.57
NEDD4L-223ENST00000588516 MYOM2P54296 1465 aa18.58■□□□□ 0.57
NEDD4L-223ENST00000588516 ZNF772Q68DY9 489 aaPredicted RBP18.58■□□□□ 0.57
NEDD4L-223ENST00000588516 KIF1BO60333 1816 aa18.57■□□□□ 0.56
NEDD4L-223ENST00000588516 CLTCL1P53675 1640 aa18.57■□□□□ 0.56
NEDD4L-223ENST00000588516 NGEFQ8N5V2 710 aa18.57■□□□□ 0.56
NEDD4L-223ENST00000588516 UBR1Q8IWV7 1749 aa18.56■□□□□ 0.56
NEDD4L-223ENST00000588516 KCNA6P17658 529 aa18.56■□□□□ 0.56
NEDD4L-223ENST00000588516 ABCC3O15438 1527 aa18.56■□□□□ 0.56
NEDD4L-223ENST00000588516 CFAP65Q6ZU64 1925 aaKnown RBP18.55■□□□□ 0.56
NEDD4L-223ENST00000588516 STAG3Q9UJ98 1225 aa18.55■□□□□ 0.56
NEDD4L-223ENST00000588516 LMTK2Q8IWU2 1503 aa18.55■□□□□ 0.56
NEDD4L-223ENST00000588516 KDM5AP29375 1690 aaKnown RBP18.55■□□□□ 0.56
NEDD4L-223ENST00000588516 ARHGAP23Q9P227 1491 aa18.54■□□□□ 0.56
NEDD4L-223ENST00000588516 SLIT1O75093 1534 aa18.54■□□□□ 0.56
NEDD4L-223ENST00000588516 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
NEDD4L-223ENST00000588516 WDR43Q15061 677 aaKnown RBP eCLIP18.53■□□□□ 0.56
NEDD4L-223ENST00000588516 CC2D1BQ5T0F9 858 aaKnown RBP18.53■□□□□ 0.56
NEDD4L-223ENST00000588516 SLAIN2Q9P270 581 aa18.53■□□□□ 0.56
NEDD4L-223ENST00000588516 PIK3C2GO75747 1445 aa18.53■□□□□ 0.56
NEDD4L-223ENST00000588516 TCERG1O14776 1098 aaKnown RBP18.52■□□□□ 0.56
NEDD4L-223ENST00000588516 PHLPP1O60346 1717 aa18.52■□□□□ 0.56
NEDD4L-223ENST00000588516 MSH6P52701 1360 aa18.51■□□□□ 0.55
NEDD4L-223ENST00000588516 RXRBP28702 533 aa18.51■□□□□ 0.55
NEDD4L-223ENST00000588516 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
NEDD4L-223ENST00000588516 ANP32AP39687 249 aaKnown RBP18.5■□□□□ 0.55
NEDD4L-223ENST00000588516 EFCAB6Q5THR3 1501 aa18.5■□□□□ 0.55
NEDD4L-223ENST00000588516 MS4A1P11836 297 aa18.49■□□□□ 0.55
NEDD4L-223ENST00000588516 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.49■□□□□ 0.55
NEDD4L-223ENST00000588516 SPATA31A6Q5VVP1 1343 aa18.49■□□□□ 0.55
NEDD4L-223ENST00000588516 TMEM2Q9UHN6 1383 aa18.49■□□□□ 0.55
NEDD4L-223ENST00000588516 SBNO2Q9Y2G9 1366 aa18.49■□□□□ 0.55
NEDD4L-223ENST00000588516 PPP2R1AP30153 589 aa18.48■□□□□ 0.55
NEDD4L-223ENST00000588516 RPGRIP1LQ68CZ1 1315 aa18.47■□□□□ 0.55
NEDD4L-223ENST00000588516 SETBP1Q9Y6X0 1596 aa18.46■□□□□ 0.55
NEDD4L-223ENST00000588516 LRP6O75581 1613 aa18.46■□□□□ 0.55
NEDD4L-223ENST00000588516 IFT172Q9UG01 1749 aa18.46■□□□□ 0.55
NEDD4L-223ENST00000588516 AMER1Q5JTC6 1135 aaPredicted RBP18.46■□□□□ 0.55
NEDD4L-223ENST00000588516 PIAS4Q8N2W9 510 aaPredicted RBP18.46■□□□□ 0.55
NEDD4L-223ENST00000588516 MROH1Q8NDA8 1641 aa18.45■□□□□ 0.54
NEDD4L-223ENST00000588516 NRXN1Q9ULB1 1477 aa18.44■□□□□ 0.54
NEDD4L-223ENST00000588516 NUTM2BA6NNL0 878 aaPredicted RBP18.43■□□□□ 0.54
NEDD4L-223ENST00000588516 NUTM2EB1AL46 878 aaPredicted RBP18.43■□□□□ 0.54
NEDD4L-223ENST00000588516 NUTM2AQ8IVF1 878 aaPredicted RBP18.43■□□□□ 0.54
NEDD4L-223ENST00000588516 MYOM1P52179 1685 aa18.41■□□□□ 0.54
NEDD4L-223ENST00000588516 PUS7Q96PZ0 661 aaKnown RBP18.41■□□□□ 0.54
NEDD4L-223ENST00000588516 NKTRP30414 1462 aaKnown RBP18.41■□□□□ 0.54
NEDD4L-223ENST00000588516 PIK3C2BO00750 1634 aa18.4■□□□□ 0.54
NEDD4L-223ENST00000588516 COL16A1Q07092 1604 aaPredicted RBP18.4■□□□□ 0.54
NEDD4L-223ENST00000588516 GOLGA2Q08379 1002 aa18.4■□□□□ 0.54
NEDD4L-223ENST00000588516 C14orf37Q86TY3 774 aa18.4■□□□□ 0.54
NEDD4L-223ENST00000588516 EXOC6Q8TAG9 804 aa18.4■□□□□ 0.54
NEDD4L-223ENST00000588516 ADAMTS8Q9UP79 889 aa18.4■□□□□ 0.54
NEDD4L-223ENST00000588516 NOP58Q9Y2X3 529 aaKnown RBP18.4■□□□□ 0.54
NEDD4L-223ENST00000588516 ADGRB3O60242 1522 aa18.38■□□□□ 0.53
NEDD4L-223ENST00000588516 CDK12Q9NYV4 1490 aaPredicted RBP18.38■□□□□ 0.53
NEDD4L-223ENST00000588516 ARHGAP31Q2M1Z3 1444 aa18.38■□□□□ 0.53
NEDD4L-223ENST00000588516 IDI1Q13907 227 aa18.38■□□□□ 0.53
NEDD4L-223ENST00000588516 IPO9Q96P70 1041 aaKnown RBP18.38■□□□□ 0.53
NEDD4L-223ENST00000588516 AFF2P51816 1311 aa18.37■□□□□ 0.53
NEDD4L-223ENST00000588516 NUTM2DQ5VT03 806 aaPredicted RBP18.37■□□□□ 0.53
NEDD4L-223ENST00000588516 SALL2Q9Y467 1007 aaPredicted RBP18.37■□□□□ 0.53
NEDD4L-223ENST00000588516 NWD1Q149M9 1564 aa18.34■□□□□ 0.53
NEDD4L-223ENST00000588516 CENPJQ9HC77 1338 aaPredicted RBP18.34■□□□□ 0.53
NEDD4L-223ENST00000588516 CDCA7LQ96GN5 454 aa18.34■□□□□ 0.53
NEDD4L-223ENST00000588516 ZBTB47Q9UFB7 747 aaPredicted RBP18.34■□□□□ 0.53
NEDD4L-223ENST00000588516 SRCAPQ6ZRS2 3230 aa18.34■□□□□ 0.53
NEDD4L-223ENST00000588516 ZNF521Q96K83 1311 aa18.33■□□□□ 0.53
NEDD4L-223ENST00000588516 CFAP70Q5T0N1 1121 aa18.33■□□□□ 0.53
NEDD4L-223ENST00000588516 PPLO60437 1756 aa18.33■□□□□ 0.52
NEDD4L-223ENST00000588516 ATF3P18847 181 aa18.32■□□□□ 0.52
NEDD4L-223ENST00000588516 ZRANB1Q9UGI0 708 aa18.32■□□□□ 0.52
NEDD4L-223ENST00000588516 POLR3AO14802 1390 aaPredicted RBP18.32■□□□□ 0.52
NEDD4L-223ENST00000588516 NINLQ9Y2I6 1382 aa18.32■□□□□ 0.52
NEDD4L-223ENST00000588516 E9PSI1 815 aa18.31■□□□□ 0.52
NEDD4L-223ENST00000588516 NCBP3Q53F19 620 aaKnown RBP18.31■□□□□ 0.52
NEDD4L-223ENST00000588516 CADPS2Q86UW7 1296 aa18.31■□□□□ 0.52
NEDD4L-223ENST00000588516 C14orf93Q9H972 538 aaKnown RBP18.31■□□□□ 0.52
NEDD4L-223ENST00000588516 QTRT2Q9H974 415 aaKnown RBP18.31■□□□□ 0.52
NEDD4L-223ENST00000588516 ADGRF5Q8IZF2 1346 aa18.31■□□□□ 0.52
NEDD4L-223ENST00000588516 SHPRHQ149N8 1683 aa18.3■□□□□ 0.52
NEDD4L-223ENST00000588516 RBM6P78332 1123 aaKnown RBP18.3■□□□□ 0.52
NEDD4L-223ENST00000588516 SLFN5Q08AF3 891 aa18.3■□□□□ 0.52
NEDD4L-223ENST00000588516 CENPQQ7L2Z9 268 aaPredicted RBP18.3■□□□□ 0.52
NEDD4L-223ENST00000588516 USP32Q8NFA0 1604 aa18.3■□□□□ 0.52
NEDD4L-223ENST00000588516 DUSP27Q5VZP5 1158 aa18.29■□□□□ 0.52
NEDD4L-223ENST00000588516 RGS12O14924 1447 aa18.29■□□□□ 0.52
NEDD4L-223ENST00000588516 NOS1P29475 1434 aa18.29■□□□□ 0.52
NEDD4L-223ENST00000588516 AHDC1Q5TGY3 1603 aaPredicted RBP18.29■□□□□ 0.52
NEDD4L-223ENST00000588516 VGFO15240 615 aaPredicted RBP18.28■□□□□ 0.52
NEDD4L-223ENST00000588516 AAMPQ13685 434 aa18.28■□□□□ 0.52
NEDD4L-223ENST00000588516 TRMT2AQ8IZ69 625 aaKnown RBP18.28■□□□□ 0.52
NEDD4L-223ENST00000588516 DDRGK1Q96HY6 314 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms