RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SLAIN2Q9P270 581 aa12.78□□□□□ -0.36
CIRBP-218ENST00000588344 SAFB2Q14151 953 aaKnown RBP eCLIP12.77□□□□□ -0.37
CIRBP-218ENST00000588344 ADGRL3Q9HAR2 1447 aa12.77□□□□□ -0.37
CIRBP-218ENST00000588344 PLEKHH1Q9ULM0 1364 aa12.76□□□□□ -0.37
CIRBP-218ENST00000588344 TRPM1Q7Z4N2 1603 aa12.76□□□□□ -0.37
CIRBP-218ENST00000588344 STRCP1A6NGW2 1772 aa12.75□□□□□ -0.37
CIRBP-218ENST00000588344 WASLO00401 505 aaPredicted RBP12.75□□□□□ -0.37
CIRBP-218ENST00000588344 EIF4G2P78344 907 aaKnown RBP eCLIP12.75□□□□□ -0.37
CIRBP-218ENST00000588344 FBXO41Q8TF61 875 aa12.75□□□□□ -0.37
CIRBP-218ENST00000588344 EVC2Q86UK5 1308 aa12.74□□□□□ -0.37
CIRBP-218ENST00000588344 MINK1Q8N4C8 1332 aaPredicted RBP12.74□□□□□ -0.37
CIRBP-218ENST00000588344 KNDC1Q76NI1 1749 aa12.74□□□□□ -0.37
CIRBP-218ENST00000588344 USP47Q96K76 1375 aa12.73□□□□□ -0.37
CIRBP-218ENST00000588344 SBNO2Q9Y2G9 1366 aa12.73□□□□□ -0.37
CIRBP-218ENST00000588344 ST20-MTHFSA0A0A6YYL1 179 aa12.73□□□□□ -0.37
CIRBP-218ENST00000588344 PUS7Q96PZ0 661 aaKnown RBP12.73□□□□□ -0.37
CIRBP-218ENST00000588344 CDCA8Q53HL2 280 aa12.72□□□□□ -0.37
CIRBP-218ENST00000588344 CDK19Q9BWU1 502 aa12.72□□□□□ -0.37
CIRBP-218ENST00000588344 HIRIP3Q9BW71 556 aaPredicted RBP12.71□□□□□ -0.37
CIRBP-218ENST00000588344 PIP4K2BP78356 416 aa12.7□□□□□ -0.38
CIRBP-218ENST00000588344 SRPK2P78362 688 aaKnown RBP12.7□□□□□ -0.38
CIRBP-218ENST00000588344 TMF1P82094 1093 aa12.7□□□□□ -0.38
CIRBP-218ENST00000588344 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
CIRBP-218ENST00000588344 TESK2Q96S53 571 aa12.69□□□□□ -0.38
CIRBP-218ENST00000588344 ANKARQ7Z5J8 1434 aa12.69□□□□□ -0.38
CIRBP-218ENST00000588344 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
CIRBP-218ENST00000588344 C1orf167Q5SNV9 1468 aa12.68□□□□□ -0.38
CIRBP-218ENST00000588344 ESCO1Q5FWF5 840 aa12.68□□□□□ -0.38
CIRBP-218ENST00000588344 NUDT16Q96DE0 195 aaKnown RBP12.68□□□□□ -0.38
CIRBP-218ENST00000588344 MST1RQ04912 1400 aa12.68□□□□□ -0.38
CIRBP-218ENST00000588344 CDC42BPGQ6DT37 1551 aa12.68□□□□□ -0.38
CIRBP-218ENST00000588344 HSPA5P11021 654 aaKnown RBP12.67□□□□□ -0.38
CIRBP-218ENST00000588344 BRINP3Q76B58 766 aa12.67□□□□□ -0.38
CIRBP-218ENST00000588344 ADGRB2O60241 1585 aa12.66□□□□□ -0.38
CIRBP-218ENST00000588344 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
CIRBP-218ENST00000588344 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
CIRBP-218ENST00000588344 ATAD2Q6PL18 1390 aa12.66□□□□□ -0.38
CIRBP-218ENST00000588344 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.65□□□□□ -0.38
CIRBP-218ENST00000588344 PLEKHG3A1L390 1219 aa12.65□□□□□ -0.38
CIRBP-218ENST00000588344 NUTM2FA1L443 756 aa12.65□□□□□ -0.38
CIRBP-218ENST00000588344 ORAI2Q96SN7 254 aa12.65□□□□□ -0.38
CIRBP-218ENST00000588344 ARHGEF28Q8N1W1 1705 aaKnown RBP12.65□□□□□ -0.38
CIRBP-218ENST00000588344 NPHP3Q7Z494 1330 aa12.64□□□□□ -0.39
CIRBP-218ENST00000588344 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
CIRBP-218ENST00000588344 TULP4Q9NRJ4 1543 aa12.63□□□□□ -0.39
CIRBP-218ENST00000588344 XIRP1Q702N8 1843 aaKnown RBP12.63□□□□□ -0.39
CIRBP-218ENST00000588344 PSME1Q06323 249 aa12.63□□□□□ -0.39
CIRBP-218ENST00000588344 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
CIRBP-218ENST00000588344 NALCNQ8IZF0 1738 aa12.62□□□□□ -0.39
CIRBP-218ENST00000588344 PRR36Q9H6K5 1346 aa12.62□□□□□ -0.39
CIRBP-218ENST00000588344 NINLQ9Y2I6 1382 aa12.61□□□□□ -0.39
CIRBP-218ENST00000588344 FOXO3O43524 673 aa12.61□□□□□ -0.39
CIRBP-218ENST00000588344 LRRC59Q96AG4 307 aaKnown RBP12.61□□□□□ -0.39
CIRBP-218ENST00000588344 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
CIRBP-218ENST00000588344 PMFBP1Q8TBY8 1022 aa12.6□□□□□ -0.39
CIRBP-218ENST00000588344 BRD4O60885 1362 aaPredicted RBP12.59□□□□□ -0.39
CIRBP-218ENST00000588344 KRT28Q7Z3Y7 464 aa12.59□□□□□ -0.39
CIRBP-218ENST00000588344 HDGFL2Q7Z4V5 671 aaPredicted RBP12.59□□□□□ -0.39
CIRBP-218ENST00000588344 TMC1Q8TDI8 760 aa12.59□□□□□ -0.39
CIRBP-218ENST00000588344 TERF2IPQ9NYB0 399 aa12.59□□□□□ -0.39
CIRBP-218ENST00000588344 SOS2Q07890 1332 aaPredicted RBP12.59□□□□□ -0.39
CIRBP-218ENST00000588344 QRICH2Q9H0J4 1663 aa12.58□□□□□ -0.4
CIRBP-218ENST00000588344 HSPA1LP34931 641 aa12.58□□□□□ -0.4
CIRBP-218ENST00000588344 PPIP5K1Q6PFW1 1433 aa12.58□□□□□ -0.4
CIRBP-218ENST00000588344 ATP7BP35670 1465 aa12.58□□□□□ -0.4
CIRBP-218ENST00000588344 ACEP12821 1306 aa12.58□□□□□ -0.4
CIRBP-218ENST00000588344 POLR3AO14802 1390 aaPredicted RBP12.57□□□□□ -0.4
CIRBP-218ENST00000588344 FMN2Q9NZ56 1722 aa12.57□□□□□ -0.4
CIRBP-218ENST00000588344 ILDR1Q86SU0 546 aaPredicted RBP12.57□□□□□ -0.4
CIRBP-218ENST00000588344 DISP3Q9P2K9 1392 aa12.56□□□□□ -0.4
CIRBP-218ENST00000588344 SLC12A5Q9H2X9 1139 aa12.56□□□□□ -0.4
CIRBP-218ENST00000588344 SBNO1A3KN83 1393 aa12.56□□□□□ -0.4
CIRBP-218ENST00000588344 ROBO1Q9Y6N7 1651 aa12.54□□□□□ -0.4
CIRBP-218ENST00000588344 DDX17Q92841 729 aaKnown RBP12.54□□□□□ -0.4
CIRBP-218ENST00000588344 AHDC1Q5TGY3 1603 aaPredicted RBP12.54□□□□□ -0.4
CIRBP-218ENST00000588344 JCADQ9P266 1359 aa12.54□□□□□ -0.4
CIRBP-218ENST00000588344 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
CIRBP-218ENST00000588344 POLR3GLQ9BT43 218 aa12.53□□□□□ -0.4
CIRBP-218ENST00000588344 KIF1AQ12756 1690 aa12.53□□□□□ -0.4
CIRBP-218ENST00000588344 SPATA31A3Q5VYP0 1347 aa12.53□□□□□ -0.4
CIRBP-218ENST00000588344 CPSF1Q10570 1443 aaKnown RBP12.53□□□□□ -0.4
CIRBP-218ENST00000588344 C11orf95C9JLR9 678 aaPredicted RBP12.52□□□□□ -0.41
CIRBP-218ENST00000588344 ARHGEF10O15013 1369 aa12.52□□□□□ -0.41
CIRBP-218ENST00000588344 KTN1Q86UP2 1357 aaKnown RBP12.52□□□□□ -0.41
CIRBP-218ENST00000588344 ANKRD36BQ8N2N9 1353 aa12.52□□□□□ -0.41
CIRBP-218ENST00000588344 XPCQ01831 940 aaPredicted RBP12.51□□□□□ -0.41
CIRBP-218ENST00000588344 KIF7Q2M1P5 1343 aa12.51□□□□□ -0.41
CIRBP-218ENST00000588344 SPATA31A6Q5VVP1 1343 aa12.51□□□□□ -0.41
CIRBP-218ENST00000588344 TTC21AQ8NDW8 1320 aa12.51□□□□□ -0.41
CIRBP-218ENST00000588344 USP32Q8NFA0 1604 aa12.51□□□□□ -0.41
CIRBP-218ENST00000588344 LMOD2Q6P5Q4 547 aa12.5□□□□□ -0.41
CIRBP-218ENST00000588344 ABTB2Q8N961 1025 aa12.5□□□□□ -0.41
CIRBP-218ENST00000588344 PXDNQ92626 1479 aa12.5□□□□□ -0.41
CIRBP-218ENST00000588344 USP6P35125 1406 aa12.49□□□□□ -0.41
CIRBP-218ENST00000588344 CCDC7Q96M83 1385 aa12.49□□□□□ -0.41
CIRBP-218ENST00000588344 TTC21BQ7Z4L5 1316 aa12.49□□□□□ -0.41
CIRBP-218ENST00000588344 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
CIRBP-218ENST00000588344 TNS3Q68CZ2 1445 aa12.48□□□□□ -0.41
CIRBP-218ENST00000588344 WASHC2AQ641Q2 1341 aa12.48□□□□□ -0.41
CIRBP-218ENST00000588344 ITSN1Q15811 1721 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms