RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 DDX17Q92841 729 aaKnown RBP19.37■□□□□ 0.69
H3F3B-205ENST00000587171 PLEKHH1Q9ULM0 1364 aa19.36■□□□□ 0.69
H3F3B-205ENST00000587171 CFAP70Q5T0N1 1121 aa19.36■□□□□ 0.69
H3F3B-205ENST00000587171 POTEAQ6S8J7 498 aa19.36■□□□□ 0.69
H3F3B-205ENST00000587171 LRRC59Q96AG4 307 aaKnown RBP19.36■□□□□ 0.69
H3F3B-205ENST00000587171 ORAI2Q96SN7 254 aa19.36■□□□□ 0.69
H3F3B-205ENST00000587171 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
H3F3B-205ENST00000587171 SIRT1Q96EB6 747 aa19.34■□□□□ 0.69
H3F3B-205ENST00000587171 DHX57Q6P158 1386 aaKnown RBP19.33■□□□□ 0.69
H3F3B-205ENST00000587171 PNPLA6Q8IY17 1366 aa19.33■□□□□ 0.69
H3F3B-205ENST00000587171 ADGRB1O14514 1584 aa19.32■□□□□ 0.68
H3F3B-205ENST00000587171 SOS2Q07890 1332 aaPredicted RBP19.32■□□□□ 0.68
H3F3B-205ENST00000587171 DLC1Q96QB1 1528 aa19.31■□□□□ 0.68
H3F3B-205ENST00000587171 MEX3CQ5U5Q3 659 aaKnown RBP19.31■□□□□ 0.68
H3F3B-205ENST00000587171 STAC3Q96MF2 364 aa19.3■□□□□ 0.68
H3F3B-205ENST00000587171 NUTM2BA6NNL0 878 aaPredicted RBP19.29■□□□□ 0.68
H3F3B-205ENST00000587171 NUTM2EB1AL46 878 aaPredicted RBP19.29■□□□□ 0.68
H3F3B-205ENST00000587171 ESCO1Q5FWF5 840 aa19.29■□□□□ 0.68
H3F3B-205ENST00000587171 NUTM2AQ8IVF1 878 aaPredicted RBP19.29■□□□□ 0.68
H3F3B-205ENST00000587171 DCAF11Q8TEB1 546 aa19.29■□□□□ 0.68
H3F3B-205ENST00000587171 RGPD8O14715 1765 aaPredicted RBP19.28■□□□□ 0.68
H3F3B-205ENST00000587171 PXDNQ92626 1479 aa19.28■□□□□ 0.68
H3F3B-205ENST00000587171 NPHP3Q7Z494 1330 aa19.27■□□□□ 0.68
H3F3B-205ENST00000587171 COL22A1Q8NFW1 1626 aaPredicted RBP19.27■□□□□ 0.68
H3F3B-205ENST00000587171 KDM2AQ9Y2K7 1162 aa19.27■□□□□ 0.68
H3F3B-205ENST00000587171 KIF1AQ12756 1690 aa19.27■□□□□ 0.67
H3F3B-205ENST00000587171 ZNF772Q68DY9 489 aaPredicted RBP19.26■□□□□ 0.67
H3F3B-205ENST00000587171 PRAM1Q96QH2 718 aa19.26■□□□□ 0.67
H3F3B-205ENST00000587171 ADGRB2O60241 1585 aa19.25■□□□□ 0.67
H3F3B-205ENST00000587171 NUTM2FA1L443 756 aa19.25■□□□□ 0.67
H3F3B-205ENST00000587171 FOXO3O43524 673 aa19.23■□□□□ 0.67
H3F3B-205ENST00000587171 SAFB2Q14151 953 aaKnown RBP eCLIP19.22■□□□□ 0.67
H3F3B-205ENST00000587171 AFF2P51816 1311 aa19.22■□□□□ 0.67
H3F3B-205ENST00000587171 ARHGEF28Q8N1W1 1705 aaKnown RBP19.21■□□□□ 0.67
H3F3B-205ENST00000587171 POGKQ9P215 609 aa19.21■□□□□ 0.67
H3F3B-205ENST00000587171 KIAA1210Q9ULL0 1709 aa19.21■□□□□ 0.67
H3F3B-205ENST00000587171 TRAK1Q9UPV9 953 aa19.2■□□□□ 0.66
H3F3B-205ENST00000587171 USP32Q8NFA0 1604 aa19.2■□□□□ 0.66
H3F3B-205ENST00000587171 XPCQ01831 940 aaPredicted RBP19.19■□□□□ 0.66
H3F3B-205ENST00000587171 C8orf37Q96NL8 207 aa19.19■□□□□ 0.66
H3F3B-205ENST00000587171 MARF1Q9Y4F3 1742 aaKnown RBP19.18■□□□□ 0.66
H3F3B-205ENST00000587171 ANKARQ7Z5J8 1434 aa19.17■□□□□ 0.66
H3F3B-205ENST00000587171 ADAMTS2O95450 1211 aa19.16■□□□□ 0.66
H3F3B-205ENST00000587171 PHF8Q9UPP1 1060 aa19.16■□□□□ 0.66
H3F3B-205ENST00000587171 CDK12Q9NYV4 1490 aaPredicted RBP19.15■□□□□ 0.66
H3F3B-205ENST00000587171 RXRBP28702 533 aa19.14■□□□□ 0.65
H3F3B-205ENST00000587171 SPATA31A3Q5VYP0 1347 aa19.14■□□□□ 0.65
H3F3B-205ENST00000587171 TULP4Q9NRJ4 1543 aa19.14■□□□□ 0.65
H3F3B-205ENST00000587171 KRT28Q7Z3Y7 464 aa19.13■□□□□ 0.65
H3F3B-205ENST00000587171 NGLY1Q96IV0 654 aa19.13■□□□□ 0.65
H3F3B-205ENST00000587171 HIRIP3Q9BW71 556 aaPredicted RBP19.13■□□□□ 0.65
H3F3B-205ENST00000587171 MINK1Q8N4C8 1332 aaPredicted RBP19.13■□□□□ 0.65
H3F3B-205ENST00000587171 EIF3AQ14152 1382 aaKnown RBP19.13■□□□□ 0.65
H3F3B-205ENST00000587171 TNS3Q68CZ2 1445 aa19.11■□□□□ 0.65
H3F3B-205ENST00000587171 PRR36Q9H6K5 1346 aa19.1■□□□□ 0.65
H3F3B-205ENST00000587171 WASLO00401 505 aaPredicted RBP19.1■□□□□ 0.65
H3F3B-205ENST00000587171 FNBP4Q8N3X1 1017 aaPredicted RBP19.1■□□□□ 0.65
H3F3B-205ENST00000587171 QTRT2Q9H974 415 aaKnown RBP19.1■□□□□ 0.65
H3F3B-205ENST00000587171 SBNO1A3KN83 1393 aa19.09■□□□□ 0.65
H3F3B-205ENST00000587171 ITSN1Q15811 1721 aa19.09■□□□□ 0.65
H3F3B-205ENST00000587171 TRPM3Q9HCF6 1732 aaPredicted RBP19.09■□□□□ 0.65
H3F3B-205ENST00000587171 PSME1Q06323 249 aa19.09■□□□□ 0.65
H3F3B-205ENST00000587171 RBM6P78332 1123 aaKnown RBP19.08■□□□□ 0.64
H3F3B-205ENST00000587171 PMFBP1Q8TBY8 1022 aa19.08■□□□□ 0.64
H3F3B-205ENST00000587171 ABCA3Q99758 1704 aa19.08■□□□□ 0.64
H3F3B-205ENST00000587171 NBPF1Q3BBV0 1214 aa19.07■□□□□ 0.64
H3F3B-205ENST00000587171 USP21Q9UK80 565 aa19.07■□□□□ 0.64
H3F3B-205ENST00000587171 RGS12O14924 1447 aa19.07■□□□□ 0.64
H3F3B-205ENST00000587171 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.06■□□□□ 0.64
H3F3B-205ENST00000587171 ATP7BP35670 1465 aa19.06■□□□□ 0.64
H3F3B-205ENST00000587171 ALS2Q96Q42 1657 aa19.05■□□□□ 0.64
H3F3B-205ENST00000587171 BCL9LQ86UU0 1499 aa19.05■□□□□ 0.64
H3F3B-205ENST00000587171 L3MBTL2Q969R5 705 aa19.05■□□□□ 0.64
H3F3B-205ENST00000587171 ATRNO75882 1429 aa19.05■□□□□ 0.64
H3F3B-205ENST00000587171 ARHGEF10O15013 1369 aa19.05■□□□□ 0.64
H3F3B-205ENST00000587171 SIN3AQ96ST3 1273 aa19.04■□□□□ 0.64
H3F3B-205ENST00000587171 TRPC5Q9UL62 973 aaPredicted RBP19.04■□□□□ 0.64
H3F3B-205ENST00000587171 TOPAZ1Q8N9V7 1692 aa19.04■□□□□ 0.64
H3F3B-205ENST00000587171 EP400Q96L91 3159 aa19.03■□□□□ 0.64
H3F3B-205ENST00000587171 TRPM1Q7Z4N2 1603 aa19.03■□□□□ 0.64
H3F3B-205ENST00000587171 SLIT2O94813 1529 aa19.02■□□□□ 0.64
H3F3B-205ENST00000587171 GPRASP1Q5JY77 1395 aa19.02■□□□□ 0.64
H3F3B-205ENST00000587171 LMOD2Q6P5Q4 547 aa19■□□□□ 0.63
H3F3B-205ENST00000587171 CABLES1Q8TDN4 633 aa19■□□□□ 0.63
H3F3B-205ENST00000587171 NUDT16Q96DE0 195 aaKnown RBP19■□□□□ 0.63
H3F3B-205ENST00000587171 CDK19Q9BWU1 502 aa19■□□□□ 0.63
H3F3B-205ENST00000587171 QRICH2Q9H0J4 1663 aa19■□□□□ 0.63
H3F3B-205ENST00000587171 PLCH1Q4KWH8 1693 aa18.99■□□□□ 0.63
H3F3B-205ENST00000587171 NGDNQ8NEJ9 315 aaKnown RBP18.99■□□□□ 0.63
H3F3B-205ENST00000587171 UPF1Q92900 1129 aaKnown RBP eCLIP18.99■□□□□ 0.63
H3F3B-205ENST00000587171 NWD2Q9ULI1 1742 aa18.99■□□□□ 0.63
H3F3B-205ENST00000587171 CRYBG1Q9Y4K1 1723 aa18.99■□□□□ 0.63
H3F3B-205ENST00000587171 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
H3F3B-205ENST00000587171 CENPJQ9HC77 1338 aaPredicted RBP18.98■□□□□ 0.63
H3F3B-205ENST00000587171 HAP1P54257 671 aaPredicted RBP18.97■□□□□ 0.63
H3F3B-205ENST00000587171 UNC5CLQ8IV45 518 aa18.96■□□□□ 0.63
H3F3B-205ENST00000587171 POLR3AO14802 1390 aaPredicted RBP18.95■□□□□ 0.62
H3F3B-205ENST00000587171 CCDC61Q9Y6R9 512 aa18.95■□□□□ 0.62
H3F3B-205ENST00000587171 GLI3P10071 1580 aa18.94■□□□□ 0.62
H3F3B-205ENST00000587171 PLEKHG5O94827 1062 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms