RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 NUTM2FA1L443 756 aa20.75■□□□□ 0.91
SMARCA4-212ENST00000586985 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
SMARCA4-212ENST00000586985 ESCO1Q5FWF5 840 aa20.74■□□□□ 0.91
SMARCA4-212ENST00000586985 ORAI2Q96SN7 254 aa20.74■□□□□ 0.91
SMARCA4-212ENST00000586985 CLSPNQ9HAW4 1339 aa20.74■□□□□ 0.91
SMARCA4-212ENST00000586985 ROBO1Q9Y6N7 1651 aa20.73■□□□□ 0.91
SMARCA4-212ENST00000586985 DLC1Q96QB1 1528 aa20.73■□□□□ 0.91
SMARCA4-212ENST00000586985 NBPF8Q3BBV2 869 aa20.72■□□□□ 0.91
SMARCA4-212ENST00000586985 C1orf167Q5SNV9 1468 aa20.72■□□□□ 0.91
SMARCA4-212ENST00000586985 MINK1Q8N4C8 1332 aaPredicted RBP20.72■□□□□ 0.91
SMARCA4-212ENST00000586985 KNDC1Q76NI1 1749 aa20.71■□□□□ 0.91
SMARCA4-212ENST00000586985 NALCNQ8IZF0 1738 aa20.71■□□□□ 0.91
SMARCA4-212ENST00000586985 HIRIP3Q9BW71 556 aaPredicted RBP20.71■□□□□ 0.91
SMARCA4-212ENST00000586985 TIMELESSQ9UNS1 1208 aa20.68■□□□□ 0.9
SMARCA4-212ENST00000586985 ROCK2O75116 1388 aaKnown RBP20.68■□□□□ 0.9
SMARCA4-212ENST00000586985 WASLO00401 505 aaPredicted RBP20.67■□□□□ 0.9
SMARCA4-212ENST00000586985 KIAA1210Q9ULL0 1709 aa20.67■□□□□ 0.9
SMARCA4-212ENST00000586985 DDX17Q92841 729 aaKnown RBP20.66■□□□□ 0.9
SMARCA4-212ENST00000586985 LRRC59Q96AG4 307 aaKnown RBP20.66■□□□□ 0.9
SMARCA4-212ENST00000586985 CDC42BPGQ6DT37 1551 aa20.66■□□□□ 0.9
SMARCA4-212ENST00000586985 JCADQ9P266 1359 aa20.64■□□□□ 0.89
SMARCA4-212ENST00000586985 CENPJQ9HC77 1338 aaPredicted RBP20.64■□□□□ 0.89
SMARCA4-212ENST00000586985 FOXO3O43524 673 aa20.64■□□□□ 0.89
SMARCA4-212ENST00000586985 CARD11Q9BXL7 1154 aa20.64■□□□□ 0.89
SMARCA4-212ENST00000586985 PHF8Q9UPP1 1060 aa20.63■□□□□ 0.89
SMARCA4-212ENST00000586985 NPHP3Q7Z494 1330 aa20.62■□□□□ 0.89
SMARCA4-212ENST00000586985 CDK19Q9BWU1 502 aa20.62■□□□□ 0.89
SMARCA4-212ENST00000586985 EIF3AQ14152 1382 aaKnown RBP20.61■□□□□ 0.89
SMARCA4-212ENST00000586985 DISP3Q9P2K9 1392 aa20.61■□□□□ 0.89
SMARCA4-212ENST00000586985 AHDC1Q5TGY3 1603 aaPredicted RBP20.6■□□□□ 0.89
SMARCA4-212ENST00000586985 PHLPP1O60346 1717 aa20.6■□□□□ 0.89
SMARCA4-212ENST00000586985 SOS2Q07890 1332 aaPredicted RBP20.59■□□□□ 0.89
SMARCA4-212ENST00000586985 PMFBP1Q8TBY8 1022 aa20.58■□□□□ 0.89
SMARCA4-212ENST00000586985 NUDT16Q96DE0 195 aaKnown RBP20.58■□□□□ 0.89
SMARCA4-212ENST00000586985 XPCQ01831 940 aaPredicted RBP20.57■□□□□ 0.88
SMARCA4-212ENST00000586985 PSME1Q06323 249 aa20.57■□□□□ 0.88
SMARCA4-212ENST00000586985 KRT28Q7Z3Y7 464 aa20.57■□□□□ 0.88
SMARCA4-212ENST00000586985 ANKARQ7Z5J8 1434 aa20.57■□□□□ 0.88
SMARCA4-212ENST00000586985 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
SMARCA4-212ENST00000586985 GPRASP1Q5JY77 1395 aa20.57■□□□□ 0.88
SMARCA4-212ENST00000586985 TRPM1Q7Z4N2 1603 aa20.56■□□□□ 0.88
SMARCA4-212ENST00000586985 SPATA31A6Q5VVP1 1343 aa20.56■□□□□ 0.88
SMARCA4-212ENST00000586985 SRPK2P78362 688 aaKnown RBP20.56■□□□□ 0.88
SMARCA4-212ENST00000586985 FMN2Q9NZ56 1722 aa20.55■□□□□ 0.88
SMARCA4-212ENST00000586985 PRR36Q9H6K5 1346 aa20.54■□□□□ 0.88
SMARCA4-212ENST00000586985 COL16A1Q07092 1604 aaPredicted RBP20.54■□□□□ 0.88
SMARCA4-212ENST00000586985 NUTM2BA6NNL0 878 aaPredicted RBP20.54■□□□□ 0.88
SMARCA4-212ENST00000586985 NUTM2EB1AL46 878 aaPredicted RBP20.54■□□□□ 0.88
SMARCA4-212ENST00000586985 NUTM2AQ8IVF1 878 aaPredicted RBP20.54■□□□□ 0.88
SMARCA4-212ENST00000586985 NGDNQ8NEJ9 315 aaKnown RBP20.54■□□□□ 0.88
SMARCA4-212ENST00000586985 ARHGEF28Q8N1W1 1705 aaKnown RBP20.53■□□□□ 0.88
SMARCA4-212ENST00000586985 CCDC61Q9Y6R9 512 aa20.53■□□□□ 0.88
SMARCA4-212ENST00000586985 ADGRB2O60241 1585 aa20.53■□□□□ 0.88
SMARCA4-212ENST00000586985 EVC2Q86UK5 1308 aa20.53■□□□□ 0.88
SMARCA4-212ENST00000586985 RALGAPBQ86X10 1494 aa20.52■□□□□ 0.88
SMARCA4-212ENST00000586985 MEX3CQ5U5Q3 659 aaKnown RBP20.52■□□□□ 0.88
SMARCA4-212ENST00000586985 CABP2Q9NPB3 220 aa20.52■□□□□ 0.88
SMARCA4-212ENST00000586985 NHSL1Q5SYE7 1610 aa20.51■□□□□ 0.87
SMARCA4-212ENST00000586985 TULP4Q9NRJ4 1543 aa20.5■□□□□ 0.87
SMARCA4-212ENST00000586985 PNPLA6Q8IY17 1366 aa20.48■□□□□ 0.87
SMARCA4-212ENST00000586985 MED1Q15648 1581 aaPredicted RBP20.48■□□□□ 0.87
SMARCA4-212ENST00000586985 LMOD2Q6P5Q4 547 aa20.48■□□□□ 0.87
SMARCA4-212ENST00000586985 SPATA31A3Q5VYP0 1347 aa20.47■□□□□ 0.87
SMARCA4-212ENST00000586985 PLEKHG3A1L390 1219 aa20.46■□□□□ 0.87
SMARCA4-212ENST00000586985 SLC24A1O60721 1099 aa20.46■□□□□ 0.87
SMARCA4-212ENST00000586985 PXDNQ92626 1479 aa20.45■□□□□ 0.86
SMARCA4-212ENST00000586985 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
SMARCA4-212ENST00000586985 KIF1AQ12756 1690 aa20.45■□□□□ 0.86
SMARCA4-212ENST00000586985 PAK3O75914 559 aaPredicted RBP20.44■□□□□ 0.86
SMARCA4-212ENST00000586985 CABP1Q9NZU7 370 aa20.44■□□□□ 0.86
SMARCA4-212ENST00000586985 ACEP12821 1306 aa20.44■□□□□ 0.86
SMARCA4-212ENST00000586985 USP32Q8NFA0 1604 aa20.43■□□□□ 0.86
SMARCA4-212ENST00000586985 ADAMTS2O95450 1211 aa20.43■□□□□ 0.86
SMARCA4-212ENST00000586985 SBNO1A3KN83 1393 aa20.43■□□□□ 0.86
SMARCA4-212ENST00000586985 ATP7BP35670 1465 aa20.43■□□□□ 0.86
SMARCA4-212ENST00000586985 HAP1P54257 671 aaPredicted RBP20.41■□□□□ 0.86
SMARCA4-212ENST00000586985 SHPRHQ149N8 1683 aa20.41■□□□□ 0.86
SMARCA4-212ENST00000586985 RGPD8O14715 1765 aaPredicted RBP20.4■□□□□ 0.86
SMARCA4-212ENST00000586985 PLEKHG5O94827 1062 aa20.4■□□□□ 0.86
SMARCA4-212ENST00000586985 PPIP5K1Q6PFW1 1433 aa20.4■□□□□ 0.86
SMARCA4-212ENST00000586985 QRICH2Q9H0J4 1663 aa20.4■□□□□ 0.86
SMARCA4-212ENST00000586985 SBNO2Q9Y2G9 1366 aa20.4■□□□□ 0.86
SMARCA4-212ENST00000586985 NGLY1Q96IV0 654 aa20.39■□□□□ 0.85
SMARCA4-212ENST00000586985 C8orf37Q96NL8 207 aa20.39■□□□□ 0.85
SMARCA4-212ENST00000586985 RGS17Q9UGC6 210 aaPredicted RBP20.39■□□□□ 0.85
SMARCA4-212ENST00000586985 LRP6O75581 1613 aa20.38■□□□□ 0.85
SMARCA4-212ENST00000586985 TNS3Q68CZ2 1445 aa20.38■□□□□ 0.85
SMARCA4-212ENST00000586985 ARHGEF10O15013 1369 aa20.38■□□□□ 0.85
SMARCA4-212ENST00000586985 POLR3AO14802 1390 aaPredicted RBP20.37■□□□□ 0.85
SMARCA4-212ENST00000586985 ATAD2Q6PL18 1390 aa20.37■□□□□ 0.85
SMARCA4-212ENST00000586985 USP47Q96K76 1375 aa20.37■□□□□ 0.85
SMARCA4-212ENST00000586985 ZNF772Q68DY9 489 aaPredicted RBP20.37■□□□□ 0.85
SMARCA4-212ENST00000586985 CABLES1Q8TDN4 633 aa20.36■□□□□ 0.85
SMARCA4-212ENST00000586985 PUS7Q96PZ0 661 aaKnown RBP20.36■□□□□ 0.85
SMARCA4-212ENST00000586985 TESK2Q96S53 571 aa20.36■□□□□ 0.85
SMARCA4-212ENST00000586985 ZNF692Q9BU19 519 aaPredicted RBP20.36■□□□□ 0.85
SMARCA4-212ENST00000586985 TMF1P82094 1093 aa20.35■□□□□ 0.85
SMARCA4-212ENST00000586985 ILDR2Q71H61 639 aa20.35■□□□□ 0.85
SMARCA4-212ENST00000586985 TMC1Q8TDI8 760 aa20.35■□□□□ 0.85
SMARCA4-212ENST00000586985 ABTB2Q8N961 1025 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms