RNA–Protein interactions for RNA: ENST00000586835.1

TMED1-202, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2

Gene TMED1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-202ENST00000586835 USP47Q96K76 1375 aa19.61■□□□□ 0.73
TMED1-202ENST00000586835 CFAP70Q5T0N1 1121 aa19.61■□□□□ 0.73
TMED1-202ENST00000586835 ROBO1Q9Y6N7 1651 aa19.61■□□□□ 0.73
TMED1-202ENST00000586835 TECPR2O15040 1411 aa19.59■□□□□ 0.73
TMED1-202ENST00000586835 ABCC11Q96J66 1382 aa19.59■□□□□ 0.73
TMED1-202ENST00000586835 HSPA5P11021 654 aaKnown RBP19.59■□□□□ 0.73
TMED1-202ENST00000586835 STK26Q9P289 416 aa19.59■□□□□ 0.73
TMED1-202ENST00000586835 YTHDC2Q9H6S0 1430 aaKnown RBP19.58■□□□□ 0.72
TMED1-202ENST00000586835 NALCNQ8IZF0 1738 aa19.57■□□□□ 0.72
TMED1-202ENST00000586835 SLC24A1O60721 1099 aa19.57■□□□□ 0.72
TMED1-202ENST00000586835 NBPF1Q3BBV0 1214 aa19.55■□□□□ 0.72
TMED1-202ENST00000586835 KNDC1Q76NI1 1749 aa19.55■□□□□ 0.72
TMED1-202ENST00000586835 SIRT1Q96EB6 747 aa19.55■□□□□ 0.72
TMED1-202ENST00000586835 MST1RQ04912 1400 aa19.54■□□□□ 0.72
TMED1-202ENST00000586835 ADGRB1O14514 1584 aa19.53■□□□□ 0.72
TMED1-202ENST00000586835 WAPLQ7Z5K2 1190 aa19.53■□□□□ 0.72
TMED1-202ENST00000586835 EIF3AQ14152 1382 aaKnown RBP19.53■□□□□ 0.72
TMED1-202ENST00000586835 BRINP3Q76B58 766 aa19.51■□□□□ 0.71
TMED1-202ENST00000586835 PLEKHH1Q9ULM0 1364 aa19.51■□□□□ 0.71
TMED1-202ENST00000586835 PHLPP1O60346 1717 aa19.48■□□□□ 0.71
TMED1-202ENST00000586835 C1orf167Q5SNV9 1468 aa19.48■□□□□ 0.71
TMED1-202ENST00000586835 DLC1Q96QB1 1528 aa19.47■□□□□ 0.71
TMED1-202ENST00000586835 DIEXFQ68CQ4 756 aaKnown RBP19.47■□□□□ 0.71
TMED1-202ENST00000586835 CDC42BPGQ6DT37 1551 aa19.47■□□□□ 0.71
TMED1-202ENST00000586835 AHDC1Q5TGY3 1603 aaPredicted RBP19.47■□□□□ 0.71
TMED1-202ENST00000586835 SBNO2Q9Y2G9 1366 aa19.46■□□□□ 0.71
TMED1-202ENST00000586835 ST20-MTHFSA0A0A6YYL1 179 aa19.46■□□□□ 0.71
TMED1-202ENST00000586835 PRAM1Q96QH2 718 aa19.45■□□□□ 0.7
TMED1-202ENST00000586835 CCDC7Q96M83 1385 aa19.44■□□□□ 0.7
TMED1-202ENST00000586835 COL16A1Q07092 1604 aaPredicted RBP19.44■□□□□ 0.7
TMED1-202ENST00000586835 TRAK1Q9UPV9 953 aa19.44■□□□□ 0.7
TMED1-202ENST00000586835 MED1Q15648 1581 aaPredicted RBP19.44■□□□□ 0.7
TMED1-202ENST00000586835 TESK2Q96S53 571 aa19.43■□□□□ 0.7
TMED1-202ENST00000586835 ORAI2Q96SN7 254 aa19.42■□□□□ 0.7
TMED1-202ENST00000586835 PHF23Q9BUL5 403 aaPredicted RBP19.42■□□□□ 0.7
TMED1-202ENST00000586835 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
TMED1-202ENST00000586835 POGKQ9P215 609 aa19.42■□□□□ 0.7
TMED1-202ENST00000586835 WASHC2AQ641Q2 1341 aa19.42■□□□□ 0.7
TMED1-202ENST00000586835 SAFB2Q14151 953 aaKnown RBP eCLIP19.41■□□□□ 0.7
TMED1-202ENST00000586835 JCADQ9P266 1359 aa19.41■□□□□ 0.7
TMED1-202ENST00000586835 NHSL1Q5SYE7 1610 aa19.4■□□□□ 0.7
TMED1-202ENST00000586835 CDCA8Q53HL2 280 aa19.4■□□□□ 0.7
TMED1-202ENST00000586835 ARHGEF28Q8N1W1 1705 aaKnown RBP19.39■□□□□ 0.7
TMED1-202ENST00000586835 TMF1P82094 1093 aa19.38■□□□□ 0.69
TMED1-202ENST00000586835 KIF7Q2M1P5 1343 aa19.38■□□□□ 0.69
TMED1-202ENST00000586835 DDX17Q92841 729 aaKnown RBP19.38■□□□□ 0.69
TMED1-202ENST00000586835 FMN2Q9NZ56 1722 aa19.38■□□□□ 0.69
TMED1-202ENST00000586835 NUTM2FA1L443 756 aa19.37■□□□□ 0.69
TMED1-202ENST00000586835 ESCO1Q5FWF5 840 aa19.37■□□□□ 0.69
TMED1-202ENST00000586835 PUS7Q96PZ0 661 aaKnown RBP19.37■□□□□ 0.69
TMED1-202ENST00000586835 CENPJQ9HC77 1338 aaPredicted RBP19.36■□□□□ 0.69
TMED1-202ENST00000586835 C11orf95C9JLR9 678 aaPredicted RBP19.36■□□□□ 0.69
TMED1-202ENST00000586835 LRRC59Q96AG4 307 aaKnown RBP19.35■□□□□ 0.69
TMED1-202ENST00000586835 ADGRB2O60241 1585 aa19.35■□□□□ 0.69
TMED1-202ENST00000586835 SOS2Q07890 1332 aaPredicted RBP19.34■□□□□ 0.69
TMED1-202ENST00000586835 MINK1Q8N4C8 1332 aaPredicted RBP19.34■□□□□ 0.69
TMED1-202ENST00000586835 SHPRHQ149N8 1683 aa19.33■□□□□ 0.68
TMED1-202ENST00000586835 QRICH2Q9H0J4 1663 aa19.33■□□□□ 0.68
TMED1-202ENST00000586835 SPATA31A6Q5VVP1 1343 aa19.32■□□□□ 0.68
TMED1-202ENST00000586835 DDX10Q13206 875 aaKnown RBP19.32■□□□□ 0.68
TMED1-202ENST00000586835 NPHP3Q7Z494 1330 aa19.31■□□□□ 0.68
TMED1-202ENST00000586835 RGPD8O14715 1765 aaPredicted RBP19.3■□□□□ 0.68
TMED1-202ENST00000586835 WASLO00401 505 aaPredicted RBP19.3■□□□□ 0.68
TMED1-202ENST00000586835 FOXO3O43524 673 aa19.3■□□□□ 0.68
TMED1-202ENST00000586835 ANKARQ7Z5J8 1434 aa19.29■□□□□ 0.68
TMED1-202ENST00000586835 PHF8Q9UPP1 1060 aa19.28■□□□□ 0.68
TMED1-202ENST00000586835 PNPLA6Q8IY17 1366 aa19.28■□□□□ 0.68
TMED1-202ENST00000586835 USP32Q8NFA0 1604 aa19.28■□□□□ 0.68
TMED1-202ENST00000586835 KIF1AQ12756 1690 aa19.27■□□□□ 0.68
TMED1-202ENST00000586835 PXDNQ92626 1479 aa19.27■□□□□ 0.67
TMED1-202ENST00000586835 LRP6O75581 1613 aa19.26■□□□□ 0.67
TMED1-202ENST00000586835 RGS17Q9UGC6 210 aaPredicted RBP19.26■□□□□ 0.67
TMED1-202ENST00000586835 PRR36Q9H6K5 1346 aa19.25■□□□□ 0.67
TMED1-202ENST00000586835 TULP4Q9NRJ4 1543 aa19.25■□□□□ 0.67
TMED1-202ENST00000586835 XPCQ01831 940 aaPredicted RBP19.25■□□□□ 0.67
TMED1-202ENST00000586835 EVC2Q86UK5 1308 aa19.24■□□□□ 0.67
TMED1-202ENST00000586835 NUTM2BA6NNL0 878 aaPredicted RBP19.23■□□□□ 0.67
TMED1-202ENST00000586835 NUTM2EB1AL46 878 aaPredicted RBP19.23■□□□□ 0.67
TMED1-202ENST00000586835 NUTM2AQ8IVF1 878 aaPredicted RBP19.23■□□□□ 0.67
TMED1-202ENST00000586835 CDK19Q9BWU1 502 aa19.23■□□□□ 0.67
TMED1-202ENST00000586835 KRT28Q7Z3Y7 464 aa19.22■□□□□ 0.67
TMED1-202ENST00000586835 NINLQ9Y2I6 1382 aa19.21■□□□□ 0.67
TMED1-202ENST00000586835 PMFBP1Q8TBY8 1022 aa19.21■□□□□ 0.67
TMED1-202ENST00000586835 NUDT16Q96DE0 195 aaKnown RBP19.21■□□□□ 0.67
TMED1-202ENST00000586835 MEX3CQ5U5Q3 659 aaKnown RBP19.2■□□□□ 0.66
TMED1-202ENST00000586835 PSME1Q06323 249 aa19.19■□□□□ 0.66
TMED1-202ENST00000586835 ATP7BP35670 1465 aa19.19■□□□□ 0.66
TMED1-202ENST00000586835 SPATA31A3Q5VYP0 1347 aa19.19■□□□□ 0.66
TMED1-202ENST00000586835 COL22A1Q8NFW1 1626 aaPredicted RBP19.18■□□□□ 0.66
TMED1-202ENST00000586835 MYOM1P52179 1685 aa19.17■□□□□ 0.66
TMED1-202ENST00000586835 SBNO1A3KN83 1393 aa19.17■□□□□ 0.66
TMED1-202ENST00000586835 ATAD2Q6PL18 1390 aa19.17■□□□□ 0.66
TMED1-202ENST00000586835 KTN1Q86UP2 1357 aaKnown RBP19.17■□□□□ 0.66
TMED1-202ENST00000586835 ANP32CO43423 234 aa19.16■□□□□ 0.66
TMED1-202ENST00000586835 CCDC61Q9Y6R9 512 aa19.16■□□□□ 0.66
TMED1-202ENST00000586835 ITSN1Q15811 1721 aa19.15■□□□□ 0.66
TMED1-202ENST00000586835 POTEAQ6S8J7 498 aa19.15■□□□□ 0.66
TMED1-202ENST00000586835 SRPK2P78362 688 aaKnown RBP19.14■□□□□ 0.65
TMED1-202ENST00000586835 NGDNQ8NEJ9 315 aaKnown RBP19.14■□□□□ 0.65
TMED1-202ENST00000586835 TNS3Q68CZ2 1445 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms